RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 CCDC175P0C221 793 aa12.31□□□□□ -0.44
BRF1-204ENST00000392557 CCT6AP40227 531 aaKnown RBP12.31□□□□□ -0.44
BRF1-204ENST00000392557 USP5P45974 858 aa12.31□□□□□ -0.44
BRF1-204ENST00000392557 FILIP1LQ4L180 1135 aa12.31□□□□□ -0.44
BRF1-204ENST00000392557 JAKMIP3Q5VZ66 844 aa12.31□□□□□ -0.44
BRF1-204ENST00000392557 FBXO33Q7Z6M2 555 aa12.31□□□□□ -0.44
BRF1-204ENST00000392557 FOXP4Q8IVH2 680 aaPredicted RBP12.31□□□□□ -0.44
BRF1-204ENST00000392557 FBXL16Q8N461 479 aa12.31□□□□□ -0.44
BRF1-204ENST00000392557 NSUN4Q96CB9 384 aaKnown RBP12.31□□□□□ -0.44
BRF1-204ENST00000392557 RIOK1Q9BRS2 568 aaKnown RBP12.31□□□□□ -0.44
BRF1-204ENST00000392557 PARP3Q9Y6F1 533 aa12.31□□□□□ -0.44
BRF1-204ENST00000392557 VWA3AA6NCI4 1184 aa12.3□□□□□ -0.44
BRF1-204ENST00000392557 SOWAHDA6NJG2 315 aa12.3□□□□□ -0.44
BRF1-204ENST00000392557 PRR29P0C7W0 189 aa12.3□□□□□ -0.44
BRF1-204ENST00000392557 ST5P78524 1137 aa12.3□□□□□ -0.44
BRF1-204ENST00000392557 IFIT1BQ5T764 474 aaKnown RBP12.3□□□□□ -0.44
BRF1-204ENST00000392557 REXO1L1PQ8IX06 675 aa12.3□□□□□ -0.44
BRF1-204ENST00000392557 SMYD4Q8IYR2 804 aaPredicted RBP12.3□□□□□ -0.44
BRF1-204ENST00000392557 PARD6BQ9BYG5 372 aa12.3□□□□□ -0.44
BRF1-204ENST00000392557 CRNKL1Q9BZJ0 848 aaKnown RBP12.3□□□□□ -0.44
BRF1-204ENST00000392557 GOLGA6L9A6NEM1 432 aa12.3□□□□□ -0.44
BRF1-204ENST00000392557 UFL1O94874 794 aa12.3□□□□□ -0.44
BRF1-204ENST00000392557 TRIM65Q6PJ69 517 aa12.3□□□□□ -0.44
BRF1-204ENST00000392557 NOSTRINQ8IVI9 506 aa12.3□□□□□ -0.44
BRF1-204ENST00000392557 IGSF22Q8N9C0 903 aa12.3□□□□□ -0.44
BRF1-204ENST00000392557 FAM217BQ9NTX9 383 aaPredicted RBP12.3□□□□□ -0.44
BRF1-204ENST00000392557 MAN1B1Q9UKM7 699 aa12.3□□□□□ -0.44
BRF1-204ENST00000392557 WDR19Q8NEZ3 1342 aa12.3□□□□□ -0.44
BRF1-204ENST00000392557 AKR1B15C9JRZ8 316 aaPredicted RBP12.3□□□□□ -0.44
BRF1-204ENST00000392557 C6orf229H3BNL8 230 aa12.3□□□□□ -0.44
BRF1-204ENST00000392557 PPP6R2O75170 966 aa12.3□□□□□ -0.44
BRF1-204ENST00000392557 LIFRP42702 1097 aa12.3□□□□□ -0.44
BRF1-204ENST00000392557 FMR1Q06787 632 aaKnown RBP eCLIP12.3□□□□□ -0.44
BRF1-204ENST00000392557 CCDC93Q567U6 631 aa12.3□□□□□ -0.44
BRF1-204ENST00000392557 PRR5LQ6MZQ0 368 aa12.3□□□□□ -0.44
BRF1-204ENST00000392557 IQCA1Q86XH1 822 aa12.3□□□□□ -0.44
BRF1-204ENST00000392557 CERKQ8TCT0 537 aa12.3□□□□□ -0.44
BRF1-204ENST00000392557 WASF1Q92558 559 aa12.3□□□□□ -0.44
BRF1-204ENST00000392557 BTAF1O14981 1849 aa12.29□□□□□ -0.44
BRF1-204ENST00000392557 SERPINB2P05120 415 aa12.29□□□□□ -0.44
BRF1-204ENST00000392557 HSP90B2PQ58FF3 399 aa12.29□□□□□ -0.44
BRF1-204ENST00000392557 RESP18Q5W5W9 173 aa12.29□□□□□ -0.44
BRF1-204ENST00000392557 SGMS1Q86VZ5 419 aa12.29□□□□□ -0.44
BRF1-204ENST00000392557 VPS18Q9P253 973 aa12.29□□□□□ -0.44
BRF1-204ENST00000392557 LRP5O75197 1615 aa12.29□□□□□ -0.44
BRF1-204ENST00000392557 LDHBP07195 334 aaKnown RBP12.29□□□□□ -0.44
BRF1-204ENST00000392557 USP17L8P0C7I0 530 aa12.29□□□□□ -0.44
BRF1-204ENST00000392557 TM4SF1P30408 202 aa12.29□□□□□ -0.44
BRF1-204ENST00000392557 CHMP4BP1P59074 171 aa12.29□□□□□ -0.44
BRF1-204ENST00000392557 FANCBQ8NB91 859 aa12.29□□□□□ -0.44
BRF1-204ENST00000392557 TUBE1Q9UJT0 475 aa12.29□□□□□ -0.44
BRF1-204ENST00000392557 TSPY2A6NKD2 308 aa12.29□□□□□ -0.44
BRF1-204ENST00000392557 GRAPQ13588 217 aa12.29□□□□□ -0.44
BRF1-204ENST00000392557 NTRK3Q16288 839 aa12.29□□□□□ -0.44
BRF1-204ENST00000392557 CTR9Q6PD62 1173 aa12.29□□□□□ -0.44
BRF1-204ENST00000392557 USP49Q70CQ1 688 aa12.29□□□□□ -0.44
BRF1-204ENST00000392557 GPR161Q8N6U8 529 aaKnown RBP12.29□□□□□ -0.44
BRF1-204ENST00000392557 GRAPLQ8TC17 118 aaPredicted RBP12.29□□□□□ -0.44
BRF1-204ENST00000392557 NUP88Q99567 741 aaPredicted RBP12.29□□□□□ -0.44
BRF1-204ENST00000392557 SAP30BPQ9UHR5 308 aaKnown RBP12.29□□□□□ -0.44
BRF1-204ENST00000392557 MAPK8IP1Q9UQF2 711 aa12.29□□□□□ -0.44
BRF1-204ENST00000392557 PCDHB6Q9Y5E3 794 aa12.29□□□□□ -0.44
BRF1-204ENST00000392557 RIMBP2O15034 1052 aa12.28□□□□□ -0.44
BRF1-204ENST00000392557 CC2D1AQ6P1N0 951 aaPredicted RBP12.28□□□□□ -0.44
BRF1-204ENST00000392557 TEX33O43247 280 aa12.28□□□□□ -0.44
BRF1-204ENST00000392557 STX10O60499 249 aa12.28□□□□□ -0.44
BRF1-204ENST00000392557 IRX5P78411 483 aaPredicted RBP12.28□□□□□ -0.44
BRF1-204ENST00000392557 WWC2Q6AWC2 1192 aa12.28□□□□□ -0.44
BRF1-204ENST00000392557 CATIPQ7Z7H3 387 aa12.28□□□□□ -0.44
BRF1-204ENST00000392557 GPIHBP1Q8IV16 184 aa12.28□□□□□ -0.44
BRF1-204ENST00000392557 ENAHQ8N8S7 591 aaPredicted RBP12.28□□□□□ -0.44
BRF1-204ENST00000392557 ZSCAN10Q96SZ4 725 aaPredicted RBP12.28□□□□□ -0.44
BRF1-204ENST00000392557 F8W031 263 aaPredicted RBP12.28□□□□□ -0.44
BRF1-204ENST00000392557 GRIK5Q16478 980 aa12.28□□□□□ -0.44
BRF1-204ENST00000392557 LEKR1Q6ZMV7 388 aa12.28□□□□□ -0.44
BRF1-204ENST00000392557 TXLNBQ8N3L3 684 aa12.28□□□□□ -0.44
BRF1-204ENST00000392557 MLKLQ8NB16 471 aa12.28□□□□□ -0.44
BRF1-204ENST00000392557 HSD3B7Q9H2F3 369 aa12.28□□□□□ -0.44
BRF1-204ENST00000392557 DCP1AQ9NPI6 582 aaPredicted RBP12.28□□□□□ -0.44
BRF1-204ENST00000392557 VPS54Q9P1Q0 977 aa12.28□□□□□ -0.44
BRF1-204ENST00000392557 N4BP3O15049 544 aa12.27□□□□□ -0.44
BRF1-204ENST00000392557 CYP2C19P33261 490 aa12.27□□□□□ -0.44
BRF1-204ENST00000392557 PTPAQ15257 358 aa12.27□□□□□ -0.44
BRF1-204ENST00000392557 KRT27Q7Z3Y8 459 aa12.27□□□□□ -0.44
BRF1-204ENST00000392557 C10orf67Q8IYJ2 551 aa12.27□□□□□ -0.44
BRF1-204ENST00000392557 DYNLL2Q96FJ2 89 aa12.27□□□□□ -0.44
BRF1-204ENST00000392557 BAZ2AQ9UIF9 1905 aaKnown RBP12.27□□□□□ -0.44
BRF1-204ENST00000392557 COL5A3P25940 1745 aaPredicted RBP12.27□□□□□ -0.45
BRF1-204ENST00000392557 CCDC196A0A1B0GTZ2 297 aa12.27□□□□□ -0.45
BRF1-204ENST00000392557 PLEKHA8P1O95397 391 aa12.27□□□□□ -0.45
BRF1-204ENST00000392557 GYS1P13807 737 aa12.27□□□□□ -0.45
BRF1-204ENST00000392557 XBP1P17861 261 aa12.27□□□□□ -0.45
BRF1-204ENST00000392557 BMP6P22004 513 aa12.27□□□□□ -0.45
BRF1-204ENST00000392557 GPSM2P81274 684 aa12.27□□□□□ -0.45
BRF1-204ENST00000392557 GOLGA6L1Q8N7Z2 621 aa12.27□□□□□ -0.45
BRF1-204ENST00000392557 TRIM34Q9BYJ4 488 aa12.27□□□□□ -0.45
BRF1-204ENST00000392557 CSRNP2Q9H175 543 aa12.27□□□□□ -0.45
BRF1-204ENST00000392557 VPS16Q9H269 839 aa12.27□□□□□ -0.45
BRF1-204ENST00000392557 V9GY48 417 aaPredicted RBP12.27□□□□□ -0.45
BRF1-204ENST00000392557 SASH3O75995 380 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms