RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 FBXO2Q9UK22 296 aaPredicted RBP20.89■□□□□ 0.94
ACTN4-202ENST00000390009 GNAQP50148 359 aa20.89■□□□□ 0.93
ACTN4-202ENST00000390009 TNFRSF25Q93038 417 aa20.89■□□□□ 0.93
ACTN4-202ENST00000390009 STK32BQ9NY57 414 aa20.89■□□□□ 0.93
ACTN4-202ENST00000390009 SCN9AQ15858 1988 aa20.89■□□□□ 0.93
ACTN4-202ENST00000390009 VEGFAP15692 232 aaPredicted RBP20.88■□□□□ 0.93
ACTN4-202ENST00000390009 CHRNA5P30532 468 aa20.88■□□□□ 0.93
ACTN4-202ENST00000390009 TRIM75PA6NK02 468 aa20.87■□□□□ 0.93
ACTN4-202ENST00000390009 NLRP5P59047 1200 aa20.87■□□□□ 0.93
ACTN4-202ENST00000390009 HHIPL2Q6UWX4 724 aa20.87■□□□□ 0.93
ACTN4-202ENST00000390009 DDX4Q9NQI0 724 aaKnown RBP20.87■□□□□ 0.93
ACTN4-202ENST00000390009 KCNH3Q9ULD8 1083 aa20.87■□□□□ 0.93
ACTN4-202ENST00000390009 MTMR7Q9Y216 660 aa20.87■□□□□ 0.93
ACTN4-202ENST00000390009 GRIN1Q05586 938 aa20.87■□□□□ 0.93
ACTN4-202ENST00000390009 ZRSR1Q15695 479 aaKnown RBP20.87■□□□□ 0.93
ACTN4-202ENST00000390009 CEP57L1Q8IYX8 460 aa20.87■□□□□ 0.93
ACTN4-202ENST00000390009 TEKT1Q969V4 418 aa20.87■□□□□ 0.93
ACTN4-202ENST00000390009 KCNQ5Q9NR82 932 aa20.87■□□□□ 0.93
ACTN4-202ENST00000390009 USP40Q9NVE5 1235 aa20.87■□□□□ 0.93
ACTN4-202ENST00000390009 SRPRBQ9Y5M8 271 aaKnown RBP20.87■□□□□ 0.93
ACTN4-202ENST00000390009 ZNF646O15015 1829 aaPredicted RBP20.87■□□□□ 0.93
ACTN4-202ENST00000390009 SPECC1Q5M775 1068 aa20.86■□□□□ 0.93
ACTN4-202ENST00000390009 ZNF219Q9P2Y4 722 aaPredicted RBP20.86■□□□□ 0.93
ACTN4-202ENST00000390009 PALM3A6NDB9 673 aaPredicted RBP20.86■□□□□ 0.93
ACTN4-202ENST00000390009 GOLGA6L19H0YKK7 550 aa20.86■□□□□ 0.93
ACTN4-202ENST00000390009 GABPAQ06546 454 aa20.86■□□□□ 0.93
ACTN4-202ENST00000390009 NOM1Q5C9Z4 860 aaKnown RBP20.86■□□□□ 0.93
ACTN4-202ENST00000390009 ZNF579Q8NAF0 562 aaKnown RBP20.86■□□□□ 0.93
ACTN4-202ENST00000390009 CNKSR1Q969H4 720 aa20.86■□□□□ 0.93
ACTN4-202ENST00000390009 CEP95Q96GE4 821 aa20.86■□□□□ 0.93
ACTN4-202ENST00000390009 MORC2Q9Y6X9 1032 aaPredicted RBP20.86■□□□□ 0.93
ACTN4-202ENST00000390009 SLC35G1Q2M3R5 365 aa20.85■□□□□ 0.93
ACTN4-202ENST00000390009 CDC42EP5Q6NZY7 148 aa20.85■□□□□ 0.93
ACTN4-202ENST00000390009 NAT10Q9H0A0 1025 aaKnown RBP20.85■□□□□ 0.93
ACTN4-202ENST00000390009 FAM13BQ9NYF5 915 aa20.85■□□□□ 0.93
ACTN4-202ENST00000390009 CYTH3O43739 400 aa20.84■□□□□ 0.93
ACTN4-202ENST00000390009 APOBEC3HQ6NTF7 200 aaKnown RBP20.84■□□□□ 0.93
ACTN4-202ENST00000390009 DHX40Q8IX18 779 aaKnown RBP20.84■□□□□ 0.93
ACTN4-202ENST00000390009 GPKOWQ92917 476 aaPredicted RBP eCLIP20.84■□□□□ 0.93
ACTN4-202ENST00000390009 SH3GLB2Q9NR46 395 aa20.84■□□□□ 0.93
ACTN4-202ENST00000390009 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.84■□□□□ 0.93
ACTN4-202ENST00000390009 PLIN4Q96Q06 1357 aa20.84■□□□□ 0.93
ACTN4-202ENST00000390009 BECN2A8MW95 431 aa20.84■□□□□ 0.93
ACTN4-202ENST00000390009 ECE2O60344 883 aa20.84■□□□□ 0.93
ACTN4-202ENST00000390009 TOP1P11387 765 aaKnown RBP20.84■□□□□ 0.93
ACTN4-202ENST00000390009 CALML3P27482 149 aa20.84■□□□□ 0.93
ACTN4-202ENST00000390009 CRKP46108 304 aa20.84■□□□□ 0.93
ACTN4-202ENST00000390009 NOVP48745 357 aa20.84■□□□□ 0.93
ACTN4-202ENST00000390009 DPCR1Q3MIW9 517 aa20.84■□□□□ 0.93
ACTN4-202ENST00000390009 LONRF3Q496Y0 759 aa20.84■□□□□ 0.93
ACTN4-202ENST00000390009 STRIP1Q5VSL9 837 aa20.84■□□□□ 0.93
ACTN4-202ENST00000390009 KRBA2Q6ZNG9 492 aa20.84■□□□□ 0.93
ACTN4-202ENST00000390009 WNT7AO00755 349 aa20.83■□□□□ 0.93
ACTN4-202ENST00000390009 RASGRP2Q7LDG7 609 aa20.83■□□□□ 0.93
ACTN4-202ENST00000390009 LZTS2Q9BRK4 669 aa20.83■□□□□ 0.93
ACTN4-202ENST00000390009 TRIM5Q9C035 493 aa20.83■□□□□ 0.93
ACTN4-202ENST00000390009 KLRF2D3W0D1 207 aa20.83■□□□□ 0.92
ACTN4-202ENST00000390009 BIN1O00499 593 aa20.83■□□□□ 0.92
ACTN4-202ENST00000390009 BMP15O95972 392 aa20.83■□□□□ 0.92
ACTN4-202ENST00000390009 GOLGA8HP0CJ92 632 aa20.83■□□□□ 0.92
ACTN4-202ENST00000390009 NLRP12P59046 1061 aa20.83■□□□□ 0.92
ACTN4-202ENST00000390009 TTC38Q5R3I4 469 aa20.83■□□□□ 0.92
ACTN4-202ENST00000390009 CNNM3Q8NE01 707 aa20.83■□□□□ 0.92
ACTN4-202ENST00000390009 C7orf43Q8WVR3 580 aa20.83■□□□□ 0.92
ACTN4-202ENST00000390009 OSBPL5Q9H0X9 879 aaPredicted RBP20.83■□□□□ 0.92
ACTN4-202ENST00000390009 TUBE1Q9UJT0 475 aa20.83■□□□□ 0.92
ACTN4-202ENST00000390009 ADAMTS3O15072 1205 aa20.82■□□□□ 0.92
ACTN4-202ENST00000390009 PARP1P09874 1014 aaKnown RBP20.82■□□□□ 0.92
ACTN4-202ENST00000390009 FKBP1AP62942 108 aaKnown RBP20.82■□□□□ 0.92
ACTN4-202ENST00000390009 PIK3AP1Q6ZUJ8 805 aa20.82■□□□□ 0.92
ACTN4-202ENST00000390009 PLA2G4DQ86XP0 818 aa20.82■□□□□ 0.92
ACTN4-202ENST00000390009 KIAA0825Q8IV33 1275 aa20.82■□□□□ 0.92
ACTN4-202ENST00000390009 CSRNP2Q9H175 543 aa20.82■□□□□ 0.92
ACTN4-202ENST00000390009 SERPINB13Q9UIV8 391 aa20.82■□□□□ 0.92
ACTN4-202ENST00000390009 ZNF500O60304 480 aaPredicted RBP20.81■□□□□ 0.92
ACTN4-202ENST00000390009 ZNF75DP51815 510 aa20.81■□□□□ 0.92
ACTN4-202ENST00000390009 PNOCQ13519 176 aa20.81■□□□□ 0.92
ACTN4-202ENST00000390009 DACT2Q5SW24 774 aa20.81■□□□□ 0.92
ACTN4-202ENST00000390009 METTL16Q86W50 562 aaKnown RBP20.81■□□□□ 0.92
ACTN4-202ENST00000390009 BLIDQ8IZY5 108 aa20.81■□□□□ 0.92
ACTN4-202ENST00000390009 AOPEPQ8N6M6 819 aa20.81■□□□□ 0.92
ACTN4-202ENST00000390009 SPC24Q8NBT2 197 aa20.81■□□□□ 0.92
ACTN4-202ENST00000390009 ZDHHC15Q96MV8 337 aa20.81■□□□□ 0.92
ACTN4-202ENST00000390009 TRAPPC10P48553 1259 aa20.81■□□□□ 0.92
ACTN4-202ENST00000390009 ZNF174Q15697 407 aa20.81■□□□□ 0.92
ACTN4-202ENST00000390009 WWC2Q6AWC2 1192 aa20.81■□□□□ 0.92
ACTN4-202ENST00000390009 TYW1BQ6NUM6 668 aa20.81■□□□□ 0.92
ACTN4-202ENST00000390009 BPIFA3Q9BQP9 254 aa20.81■□□□□ 0.92
ACTN4-202ENST00000390009 SPZ1Q9BXG8 430 aa20.81■□□□□ 0.92
ACTN4-202ENST00000390009 SWAP70Q9UH65 585 aa20.81■□□□□ 0.92
ACTN4-202ENST00000390009 PCDHA4Q9UN74 947 aa20.81■□□□□ 0.92
ACTN4-202ENST00000390009 POLR2DO15514 142 aaKnown RBP20.8■□□□□ 0.92
ACTN4-202ENST00000390009 AOC3Q16853 763 aa20.8■□□□□ 0.92
ACTN4-202ENST00000390009 USP17L2Q6R6M4 530 aa20.8■□□□□ 0.92
ACTN4-202ENST00000390009 SARM1Q6SZW1 724 aa20.8■□□□□ 0.92
ACTN4-202ENST00000390009 ELOA2Q8IYF1 753 aaPredicted RBP20.8■□□□□ 0.92
ACTN4-202ENST00000390009 ZNF830Q96NB3 372 aaPredicted RBP20.8■□□□□ 0.92
ACTN4-202ENST00000390009 MRIQ9BWK5 157 aa20.8■□□□□ 0.92
ACTN4-202ENST00000390009 MTMR4Q9NYA4 1195 aa20.8■□□□□ 0.92
ACTN4-202ENST00000390009 GOLGA6L6A8MZA4 724 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms