RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 A0A087X0B3 334 aa17.04■□□□□ 0.32
SCFD2-201ENST00000388940 TSPY2A6NKD2 308 aa17.04■□□□□ 0.32
SCFD2-201ENST00000388940 C12orf60Q5U649 245 aa17.04■□□□□ 0.32
SCFD2-201ENST00000388940 C15orf52Q6ZUT6 534 aaKnown RBP17.04■□□□□ 0.32
SCFD2-201ENST00000388940 DHX58Q96C10 678 aa17.04■□□□□ 0.32
SCFD2-201ENST00000388940 PAGE5Q96GU1 130 aa17.04■□□□□ 0.32
SCFD2-201ENST00000388940 GSDMAQ96QA5 445 aa17.04■□□□□ 0.32
SCFD2-201ENST00000388940 SH3GLB2Q9NR46 395 aa17.04■□□□□ 0.32
SCFD2-201ENST00000388940 ROBO3Q96MS0 1386 aa17.04■□□□□ 0.32
SCFD2-201ENST00000388940 TMEM232C9JQI7 657 aa17.04■□□□□ 0.32
SCFD2-201ENST00000388940 ZNF174Q15697 407 aa17.04■□□□□ 0.32
SCFD2-201ENST00000388940 MED15Q96RN5 788 aa17.04■□□□□ 0.32
SCFD2-201ENST00000388940 PYM1Q9BRP8 204 aaKnown RBP17.04■□□□□ 0.32
SCFD2-201ENST00000388940 MCM9Q9NXL9 1143 aa17.04■□□□□ 0.32
SCFD2-201ENST00000388940 WNT7AO00755 349 aa17.03■□□□□ 0.32
SCFD2-201ENST00000388940 NLRP5P59047 1200 aa17.03■□□□□ 0.32
SCFD2-201ENST00000388940 PPP4CP60510 307 aa17.03■□□□□ 0.32
SCFD2-201ENST00000388940 PIP4K2BP78356 416 aa17.03■□□□□ 0.32
SCFD2-201ENST00000388940 GRAPQ13588 217 aa17.03■□□□□ 0.32
SCFD2-201ENST00000388940 GRAPLQ8TC17 118 aaPredicted RBP17.03■□□□□ 0.32
SCFD2-201ENST00000388940 C8orf37Q96NL8 207 aa17.03■□□□□ 0.32
SCFD2-201ENST00000388940 BCL11BQ9C0K0 894 aaPredicted RBP17.03■□□□□ 0.32
SCFD2-201ENST00000388940 L2HGDHQ9H9P8 463 aa17.03■□□□□ 0.32
SCFD2-201ENST00000388940 LDHBP07195 334 aaKnown RBP17.02■□□□□ 0.32
SCFD2-201ENST00000388940 CDK11BP21127 795 aaKnown RBP17.02■□□□□ 0.32
SCFD2-201ENST00000388940 CALML3P27482 149 aa17.02■□□□□ 0.32
SCFD2-201ENST00000388940 GSTO1P78417 241 aa17.02■□□□□ 0.32
SCFD2-201ENST00000388940 DPYDQ12882 1025 aa17.02■□□□□ 0.32
SCFD2-201ENST00000388940 PTGDRQ13258 359 aa17.02■□□□□ 0.32
SCFD2-201ENST00000388940 ERO1AQ96HE7 468 aa17.02■□□□□ 0.32
SCFD2-201ENST00000388940 TCP11L1Q9NUJ3 509 aa17.02■□□□□ 0.32
SCFD2-201ENST00000388940 USP17L8P0C7I0 530 aa17.02■□□□□ 0.32
SCFD2-201ENST00000388940 ZNF827Q17R98 1081 aa17.02■□□□□ 0.32
SCFD2-201ENST00000388940 NOM1Q5C9Z4 860 aaKnown RBP17.02■□□□□ 0.32
SCFD2-201ENST00000388940 PPP4R3BQ5MIZ7 849 aa17.02■□□□□ 0.32
SCFD2-201ENST00000388940 TMEM139Q8IV31 216 aa17.02■□□□□ 0.32
SCFD2-201ENST00000388940 SMAP1Q8IYB5 467 aaPredicted RBP17.02■□□□□ 0.32
SCFD2-201ENST00000388940 CCDC24Q8N4L8 307 aa17.02■□□□□ 0.32
SCFD2-201ENST00000388940 KAT14Q9H8E8 782 aa17.02■□□□□ 0.32
SCFD2-201ENST00000388940 ARHGAP6O43182 974 aa17.01■□□□□ 0.31
SCFD2-201ENST00000388940 TFAP4Q01664 338 aa17.01■□□□□ 0.31
SCFD2-201ENST00000388940 NR1I3Q14994 352 aa17.01■□□□□ 0.31
SCFD2-201ENST00000388940 SPATA1Q5VX52 437 aa17.01■□□□□ 0.31
SCFD2-201ENST00000388940 ARL6IP4Q66PJ3 421 aaKnown RBP17.01■□□□□ 0.31
SCFD2-201ENST00000388940 SPECC1LQ69YQ0 1117 aa17.01■□□□□ 0.31
SCFD2-201ENST00000388940 AMIGO3Q86WK7 504 aa17.01■□□□□ 0.31
SCFD2-201ENST00000388940 IL17RBQ9NRM6 502 aa17.01■□□□□ 0.31
SCFD2-201ENST00000388940 CGNQ9P2M7 1197 aaKnown RBP17.01■□□□□ 0.31
SCFD2-201ENST00000388940 NAV1Q8NEY1 1877 aa17.01■□□□□ 0.31
SCFD2-201ENST00000388940 SLU7O95391 586 aaKnown RBP17.01■□□□□ 0.31
SCFD2-201ENST00000388940 GNAQP50148 359 aa17.01■□□□□ 0.31
SCFD2-201ENST00000388940 CUL4BQ13620 913 aa17.01■□□□□ 0.31
SCFD2-201ENST00000388940 E2F4Q16254 413 aa17.01■□□□□ 0.31
SCFD2-201ENST00000388940 BAZ2BQ9UIF8 2168 aaKnown RBP17.01■□□□□ 0.31
SCFD2-201ENST00000388940 XDHP47989 1333 aa17.01■□□□□ 0.31
SCFD2-201ENST00000388940 A0A1B0GTH6 734 aa17■□□□□ 0.31
SCFD2-201ENST00000388940 BAG3O95817 575 aa17■□□□□ 0.31
SCFD2-201ENST00000388940 LDHCP07864 332 aa17■□□□□ 0.31
SCFD2-201ENST00000388940 RFC4P35249 363 aa17■□□□□ 0.31
SCFD2-201ENST00000388940 USP5P45974 858 aa17■□□□□ 0.31
SCFD2-201ENST00000388940 GRM4Q14833 912 aa17■□□□□ 0.31
SCFD2-201ENST00000388940 TRAPPC3LQ5T215 181 aa17■□□□□ 0.31
SCFD2-201ENST00000388940 PIK3AP1Q6ZUJ8 805 aa17■□□□□ 0.31
SCFD2-201ENST00000388940 CERS3Q8IU89 383 aa17■□□□□ 0.31
SCFD2-201ENST00000388940 TRMT44Q8IYL2 757 aaKnown RBP17■□□□□ 0.31
SCFD2-201ENST00000388940 FAM177A1Q8N128 213 aaPredicted RBP17■□□□□ 0.31
SCFD2-201ENST00000388940 IQUBQ8NA54 791 aa17■□□□□ 0.31
SCFD2-201ENST00000388940 SAMSN1Q9NSI8 373 aaKnown RBP17■□□□□ 0.31
SCFD2-201ENST00000388940 ANKIB1Q9P2G1 1089 aa17■□□□□ 0.31
SCFD2-201ENST00000388940 ZNF215Q9UL58 517 aaPredicted RBP17■□□□□ 0.31
SCFD2-201ENST00000388940 VWA3AA6NCI4 1184 aa17■□□□□ 0.31
SCFD2-201ENST00000388940 STX10O60499 249 aa17■□□□□ 0.31
SCFD2-201ENST00000388940 AFMP43652 599 aa17■□□□□ 0.31
SCFD2-201ENST00000388940 ETF1P62495 437 aaKnown RBP17■□□□□ 0.31
SCFD2-201ENST00000388940 CCDC93Q567U6 631 aa17■□□□□ 0.31
SCFD2-201ENST00000388940 ZNF804AQ7Z570 1209 aa17■□□□□ 0.31
SCFD2-201ENST00000388940 PNMA1Q8ND90 353 aa17■□□□□ 0.31
SCFD2-201ENST00000388940 PHLPP2Q6ZVD8 1323 aa16.99■□□□□ 0.31
SCFD2-201ENST00000388940 ZSCAN12O43309 604 aa16.99■□□□□ 0.31
SCFD2-201ENST00000388940 SYT10Q6XYQ8 523 aa16.99■□□□□ 0.31
SCFD2-201ENST00000388940 REXO1L1PQ8IX06 675 aa16.99■□□□□ 0.31
SCFD2-201ENST00000388940 AMOTL1Q8IY63 956 aa16.99■□□□□ 0.31
SCFD2-201ENST00000388940 BLIDQ8IZY5 108 aa16.99■□□□□ 0.31
SCFD2-201ENST00000388940 SH3RF3Q8TEJ3 882 aaPredicted RBP16.99■□□□□ 0.31
SCFD2-201ENST00000388940 FEZ1Q99689 392 aa16.99■□□□□ 0.31
SCFD2-201ENST00000388940 CDK5RAP2Q96SN8 1893 aa16.99■□□□□ 0.31
SCFD2-201ENST00000388940 PPP1R3GB7ZBB8 358 aa16.98■□□□□ 0.31
SCFD2-201ENST00000388940 CD44P16070 742 aaKnown RBP16.98■□□□□ 0.31
SCFD2-201ENST00000388940 CDKAL1Q5VV42 579 aa16.98■□□□□ 0.31
SCFD2-201ENST00000388940 APTXQ7Z2E3 356 aaKnown RBP16.98■□□□□ 0.31
SCFD2-201ENST00000388940 TC2NQ8N9U0 490 aa16.98■□□□□ 0.31
SCFD2-201ENST00000388940 PCDHA4Q9UN74 947 aa16.98■□□□□ 0.31
SCFD2-201ENST00000388940 JAG2Q9Y219 1238 aa16.98■□□□□ 0.31
SCFD2-201ENST00000388940 M0R2N6 131 aa16.98■□□□□ 0.31
SCFD2-201ENST00000388940 NPHP1O15259 732 aa16.98■□□□□ 0.31
SCFD2-201ENST00000388940 VEGFAP15692 232 aaPredicted RBP16.98■□□□□ 0.31
SCFD2-201ENST00000388940 LONP1P36776 959 aaKnown RBP16.98■□□□□ 0.31
SCFD2-201ENST00000388940 NAA30Q147X3 362 aaPredicted RBP16.98■□□□□ 0.31
SCFD2-201ENST00000388940 NFIXQ14938 502 aa16.98■□□□□ 0.31
SCFD2-201ENST00000388940 GALNT17Q6IS24 598 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 188.9 ms