RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 ATXN2Q99700 1313 aaKnown RBP16.84■□□□□ 0.29
CTNS-202ENST00000381870 LMO7Q8WWI1 1683 aa16.84■□□□□ 0.29
CTNS-202ENST00000381870 SH2B2O14492 632 aaPredicted RBP16.84■□□□□ 0.29
CTNS-202ENST00000381870 SEMA3EO15041 775 aa16.84■□□□□ 0.29
CTNS-202ENST00000381870 CHUKO15111 745 aa16.84■□□□□ 0.29
CTNS-202ENST00000381870 RDXP35241 583 aaKnown RBP16.84■□□□□ 0.29
CTNS-202ENST00000381870 SKOR1P84550 965 aa16.84■□□□□ 0.29
CTNS-202ENST00000381870 DIS3L2Q8IYB7 885 aaKnown RBP16.84■□□□□ 0.29
CTNS-202ENST00000381870 IP6K1Q92551 441 aa16.84■□□□□ 0.29
CTNS-202ENST00000381870 FAM217BQ9NTX9 383 aaPredicted RBP16.84■□□□□ 0.29
CTNS-202ENST00000381870 AMOTL2Q9Y2J4 779 aa16.84■□□□□ 0.29
CTNS-202ENST00000381870 DDX60Q8IY21 1712 aaKnown RBP16.83■□□□□ 0.29
CTNS-202ENST00000381870 SATB1Q01826 763 aa16.83■□□□□ 0.28
CTNS-202ENST00000381870 FKBP15Q5T1M5 1219 aa16.83■□□□□ 0.28
CTNS-202ENST00000381870 KCTD16Q68DU8 428 aa16.83■□□□□ 0.28
CTNS-202ENST00000381870 ANKRD13DQ6ZTN6 518 aa16.83■□□□□ 0.28
CTNS-202ENST00000381870 MIEF2Q96C03 454 aa16.83■□□□□ 0.28
CTNS-202ENST00000381870 DMGDHQ9UI17 866 aaKnown RBP16.83■□□□□ 0.28
CTNS-202ENST00000381870 MST1RQ04912 1400 aa16.83■□□□□ 0.28
CTNS-202ENST00000381870 ECM29Q5VYK3 1845 aa16.83■□□□□ 0.28
CTNS-202ENST00000381870 COPB1P53618 953 aaKnown RBP16.82■□□□□ 0.28
CTNS-202ENST00000381870 PREPLQ4J6C6 727 aaPredicted RBP16.82■□□□□ 0.28
CTNS-202ENST00000381870 LRRC24Q50LG9 513 aa16.82■□□□□ 0.28
CTNS-202ENST00000381870 TBC1D10CQ8IV04 446 aa16.82■□□□□ 0.28
CTNS-202ENST00000381870 PAGE5Q96GU1 130 aa16.82■□□□□ 0.28
CTNS-202ENST00000381870 EPSTI1Q96J88 318 aa16.82■□□□□ 0.28
CTNS-202ENST00000381870 KLC4Q9NSK0 619 aa16.82■□□□□ 0.28
CTNS-202ENST00000381870 LIMA1Q9UHB6 759 aaKnown RBP16.82■□□□□ 0.28
CTNS-202ENST00000381870 SRPRBQ9Y5M8 271 aaKnown RBP16.82■□□□□ 0.28
CTNS-202ENST00000381870 RCCD1A6NED2 376 aa16.82■□□□□ 0.28
CTNS-202ENST00000381870 OPA1O60313 960 aa16.82■□□□□ 0.28
CTNS-202ENST00000381870 ACTN3Q08043 901 aaPredicted RBP16.82■□□□□ 0.28
CTNS-202ENST00000381870 NR5A1Q13285 461 aa16.82■□□□□ 0.28
CTNS-202ENST00000381870 ZNF579Q8NAF0 562 aaKnown RBP16.82■□□□□ 0.28
CTNS-202ENST00000381870 STAMQ92783 540 aa16.82■□□□□ 0.28
CTNS-202ENST00000381870 LRRC1Q9BTT6 524 aa16.82■□□□□ 0.28
CTNS-202ENST00000381870 PLEKHG1Q9ULL1 1385 aa16.82■□□□□ 0.28
CTNS-202ENST00000381870 GOLGA8AA7E2F4 631 aa16.81■□□□□ 0.28
CTNS-202ENST00000381870 ZBTB43O43298 467 aa16.81■□□□□ 0.28
CTNS-202ENST00000381870 NAP1L1P55209 391 aaKnown RBP16.81■□□□□ 0.28
CTNS-202ENST00000381870 SLC7A5Q01650 507 aa16.81■□□□□ 0.28
CTNS-202ENST00000381870 PPARAQ07869 468 aa16.81■□□□□ 0.28
CTNS-202ENST00000381870 RNF187Q5TA31 235 aaPredicted RBP16.81■□□□□ 0.28
CTNS-202ENST00000381870 WDR19Q8NEZ3 1342 aa16.81■□□□□ 0.28
CTNS-202ENST00000381870 ZNF594Q96JF6 807 aaPredicted RBP16.81■□□□□ 0.28
CTNS-202ENST00000381870 LACRTQ9GZZ8 138 aa16.81■□□□□ 0.28
CTNS-202ENST00000381870 CENPHQ9H3R5 247 aa16.81■□□□□ 0.28
CTNS-202ENST00000381870 JADE2Q9NQC1 790 aa16.81■□□□□ 0.28
CTNS-202ENST00000381870 ARHGAP23Q9P227 1491 aa16.81■□□□□ 0.28
CTNS-202ENST00000381870 TTC26A0AVF1 554 aa16.81■□□□□ 0.28
CTNS-202ENST00000381870 ECM2O94769 699 aaPredicted RBP16.81■□□□□ 0.28
CTNS-202ENST00000381870 MMP1P03956 469 aa16.81■□□□□ 0.28
CTNS-202ENST00000381870 PPP2R5AQ15172 486 aa16.81■□□□□ 0.28
CTNS-202ENST00000381870 NFXL1Q6ZNB6 911 aa16.81■□□□□ 0.28
CTNS-202ENST00000381870 TACO1Q9BSH4 297 aaKnown RBP16.81■□□□□ 0.28
CTNS-202ENST00000381870 DUSP10Q9Y6W6 482 aa16.81■□□□□ 0.28
CTNS-202ENST00000381870 WDR17Q8IZU2 1322 aa16.8■□□□□ 0.28
CTNS-202ENST00000381870 EPB41P11171 864 aaKnown RBP16.8■□□□□ 0.28
CTNS-202ENST00000381870 NF2P35240 595 aa16.8■□□□□ 0.28
CTNS-202ENST00000381870 SSRP1Q08945 709 aaKnown RBP16.8■□□□□ 0.28
CTNS-202ENST00000381870 NAA35Q5VZE5 725 aa16.8■□□□□ 0.28
CTNS-202ENST00000381870 LRRC10BA6NIK2 292 aa16.8■□□□□ 0.28
CTNS-202ENST00000381870 B4E1Z4 1266 aa16.8■□□□□ 0.28
CTNS-202ENST00000381870 GPAA1O43292 621 aa16.8■□□□□ 0.28
CTNS-202ENST00000381870 IDEP14735 1019 aa16.8■□□□□ 0.28
CTNS-202ENST00000381870 KCNA6P17658 529 aa16.8■□□□□ 0.28
CTNS-202ENST00000381870 CASP7P55210 303 aa16.8■□□□□ 0.28
CTNS-202ENST00000381870 GUCY1A3Q02108 690 aa16.8■□□□□ 0.28
CTNS-202ENST00000381870 TRIM14Q14142 442 aa16.8■□□□□ 0.28
CTNS-202ENST00000381870 KIAA1328Q86T90 577 aa16.8■□□□□ 0.28
CTNS-202ENST00000381870 TICAM2Q86XR7 235 aa16.8■□□□□ 0.28
CTNS-202ENST00000381870 RNPC3Q96LT9 517 aaKnown RBP16.8■□□□□ 0.28
CTNS-202ENST00000381870 VEZTQ9HBM0 779 aa16.8■□□□□ 0.28
CTNS-202ENST00000381870 STRN4Q9NRL3 753 aa16.8■□□□□ 0.28
CTNS-202ENST00000381870 ODF2LQ9ULJ1 636 aa16.8■□□□□ 0.28
CTNS-202ENST00000381870 LSP1P33241 339 aa16.79■□□□□ 0.28
CTNS-202ENST00000381870 MATR3P43243 847 aaKnown RBP eCLIP16.79■□□□□ 0.28
CTNS-202ENST00000381870 FOXO4P98177 505 aa16.79■□□□□ 0.28
CTNS-202ENST00000381870 UBXN1Q04323 297 aa16.79■□□□□ 0.28
CTNS-202ENST00000381870 TTF1Q15361 905 aaPredicted RBP16.79■□□□□ 0.28
CTNS-202ENST00000381870 CCDC40Q4G0X9 1142 aa16.79■□□□□ 0.28
CTNS-202ENST00000381870 RILPL1Q5EBL4 403 aa16.79■□□□□ 0.28
CTNS-202ENST00000381870 WDR59Q6PJI9 974 aa16.79■□□□□ 0.28
CTNS-202ENST00000381870 SH3RF1Q7Z6J0 888 aa16.79■□□□□ 0.28
CTNS-202ENST00000381870 CCDC13Q8IYE1 715 aa16.79■□□□□ 0.28
CTNS-202ENST00000381870 RUFY1Q96T51 708 aa16.79■□□□□ 0.28
CTNS-202ENST00000381870 VCPKMTQ9H867 229 aa16.79■□□□□ 0.28
CTNS-202ENST00000381870 INCENPQ9NQS7 918 aa16.79■□□□□ 0.28
CTNS-202ENST00000381870 RGPD2P0DJD1 1756 aa16.79■□□□□ 0.28
CTNS-202ENST00000381870 MYO5AQ9Y4I1 1855 aaKnown RBP16.79■□□□□ 0.28
CTNS-202ENST00000381870 KCNJ18B7U540 433 aa16.79■□□□□ 0.28
CTNS-202ENST00000381870 RASSF9O75901 435 aa16.79■□□□□ 0.28
CTNS-202ENST00000381870 KRT14P02533 472 aa16.79■□□□□ 0.28
CTNS-202ENST00000381870 APBA1Q02410 837 aa16.79■□□□□ 0.28
CTNS-202ENST00000381870 KCNJ12Q14500 433 aa16.79■□□□□ 0.28
CTNS-202ENST00000381870 SAFBQ15424 915 aaKnown RBP eCLIP16.79■□□□□ 0.28
CTNS-202ENST00000381870 TCP11X2Q5H9J9 407 aa16.79■□□□□ 0.28
CTNS-202ENST00000381870 SPATS2Q86XZ4 545 aaKnown RBP16.79■□□□□ 0.28
CTNS-202ENST00000381870 OR8K1Q8NGG5 319 aa16.79■□□□□ 0.28
CTNS-202ENST00000381870 OXER1Q8TDS5 423 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms