RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 EEF2KMTQ96G04 330 aa15.66■□□□□ 0.1
SDC1-202ENST00000381150 MYCBPQ99417 103 aaPredicted RBP15.66■□□□□ 0.1
SDC1-202ENST00000381150 ADGRG1Q9Y653 693 aa15.66■□□□□ 0.1
SDC1-202ENST00000381150 NEDD4P46934 1319 aa15.66■□□□□ 0.1
SDC1-202ENST00000381150 SPATA31A5Q5VU36 1347 aa15.66■□□□□ 0.1
SDC1-202ENST00000381150 SPATA31A7Q8IWB4 1347 aa15.66■□□□□ 0.1
SDC1-202ENST00000381150 RASGRF1Q13972 1273 aa15.66■□□□□ 0.1
SDC1-202ENST00000381150 NUTM2AQ8IVF1 878 aaPredicted RBP15.66■□□□□ 0.1
SDC1-202ENST00000381150 SPATA5Q8NB90 893 aa15.66■□□□□ 0.1
SDC1-202ENST00000381150 NAPGQ99747 312 aaPredicted RBP15.66■□□□□ 0.1
SDC1-202ENST00000381150 GBP3Q9H0R5 595 aa15.66■□□□□ 0.1
SDC1-202ENST00000381150 INCENPQ9NQS7 918 aa15.66■□□□□ 0.1
SDC1-202ENST00000381150 RTL9Q8NET4 1388 aa15.66■□□□□ 0.1
SDC1-202ENST00000381150 LTBP4Q8N2S1 1624 aa15.65■□□□□ 0.1
SDC1-202ENST00000381150 ALX1Q15699 326 aa15.65■□□□□ 0.1
SDC1-202ENST00000381150 FILIP1LQ4L180 1135 aa15.65■□□□□ 0.1
SDC1-202ENST00000381150 COL5A3P25940 1745 aaPredicted RBP15.65■□□□□ 0.1
SDC1-202ENST00000381150 N4BP3O15049 544 aa15.65■□□□□ 0.1
SDC1-202ENST00000381150 ERLIN2O94905 339 aa15.65■□□□□ 0.1
SDC1-202ENST00000381150 IARSP41252 1262 aaKnown RBP15.65■□□□□ 0.1
SDC1-202ENST00000381150 FAM107BQ9H098 131 aa15.65■□□□□ 0.1
SDC1-202ENST00000381150 TACC3Q9Y6A5 838 aa15.65■□□□□ 0.1
SDC1-202ENST00000381150 BTBD18B2RXH4 712 aa15.65■□□□□ 0.1
SDC1-202ENST00000381150 GUCY2CP25092 1073 aa15.65■□□□□ 0.1
SDC1-202ENST00000381150 FAM71BQ8TC56 605 aa15.65■□□□□ 0.1
SDC1-202ENST00000381150 SECISBP2LQ93073 1101 aaKnown RBP15.65■□□□□ 0.1
SDC1-202ENST00000381150 PSD3Q9NYI0 1048 aa15.65■□□□□ 0.1
SDC1-202ENST00000381150 POTEB2H3BUK9 544 aa15.64■□□□□ 0.09
SDC1-202ENST00000381150 PARP10Q53GL7 1025 aa15.64■□□□□ 0.09
SDC1-202ENST00000381150 USP49Q70CQ1 688 aa15.64■□□□□ 0.09
SDC1-202ENST00000381150 PSMB7Q99436 277 aa15.64■□□□□ 0.09
SDC1-202ENST00000381150 MKRN1Q9UHC7 482 aaKnown RBP15.64■□□□□ 0.09
SDC1-202ENST00000381150 BCL9LQ86UU0 1499 aa15.64■□□□□ 0.09
SDC1-202ENST00000381150 SENP2Q9HC62 589 aa15.64■□□□□ 0.09
SDC1-202ENST00000381150 TUBE1Q9UJT0 475 aa15.64■□□□□ 0.09
SDC1-202ENST00000381150 B4E1Z4 1266 aa15.63■□□□□ 0.09
SDC1-202ENST00000381150 DNA2P51530 1060 aa15.63■□□□□ 0.09
SDC1-202ENST00000381150 SAFBQ15424 915 aaKnown RBP eCLIP15.63■□□□□ 0.09
SDC1-202ENST00000381150 KRI1Q8N9T8 703 aaKnown RBP15.63■□□□□ 0.09
SDC1-202ENST00000381150 IGDCC4Q8TDY8 1250 aa15.63■□□□□ 0.09
SDC1-202ENST00000381150 NUP133Q8WUM0 1156 aa15.63■□□□□ 0.09
SDC1-202ENST00000381150 ZKSCAN3Q9BRR0 538 aa15.63■□□□□ 0.09
SDC1-202ENST00000381150 EPB41L4AQ9HCS5 686 aaPredicted RBP15.63■□□□□ 0.09
SDC1-202ENST00000381150 ZMYM6O95789 1325 aa15.63■□□□□ 0.09
SDC1-202ENST00000381150 ZEB2O60315 1214 aa15.63■□□□□ 0.09
SDC1-202ENST00000381150 SLC5A1P13866 664 aa15.63■□□□□ 0.09
SDC1-202ENST00000381150 BARGINQ6ZT62 677 aa15.63■□□□□ 0.09
SDC1-202ENST00000381150 TADA2BQ86TJ2 420 aa15.63■□□□□ 0.09
SDC1-202ENST00000381150 BCAS4Q8TDM0 211 aa15.63■□□□□ 0.09
SDC1-202ENST00000381150 BCORQ6W2J9 1755 aa15.63■□□□□ 0.09
SDC1-202ENST00000381150 EBAG9O00559 213 aa15.63■□□□□ 0.09
SDC1-202ENST00000381150 SH2B2O14492 632 aaPredicted RBP15.63■□□□□ 0.09
SDC1-202ENST00000381150 CORO7P57737 925 aa15.63■□□□□ 0.09
SDC1-202ENST00000381150 DACH1Q9UI36 760 aa15.63■□□□□ 0.09
SDC1-202ENST00000381150 ANGEL1Q9UNK9 670 aaKnown RBP15.63■□□□□ 0.09
SDC1-202ENST00000381150 GOLGA8AA7E2F4 631 aa15.62■□□□□ 0.09
SDC1-202ENST00000381150 PATL2C9JE40 543 aaKnown RBP15.62■□□□□ 0.09
SDC1-202ENST00000381150 KCNQ2O43526 872 aa15.62■□□□□ 0.09
SDC1-202ENST00000381150 STIM1Q13586 685 aa15.62■□□□□ 0.09
SDC1-202ENST00000381150 MYO6Q9UM54 1294 aa15.62■□□□□ 0.09
SDC1-202ENST00000381150 ZNF831Q5JPB2 1677 aa15.62■□□□□ 0.09
SDC1-202ENST00000381150 hCG_1642624A0A1W2PR95 340 aa15.62■□□□□ 0.09
SDC1-202ENST00000381150 GGCXP38435 758 aa15.62■□□□□ 0.09
SDC1-202ENST00000381150 FXR1P51114 621 aaKnown RBP eCLIP15.62■□□□□ 0.09
SDC1-202ENST00000381150 PIP4K2BP78356 416 aa15.62■□□□□ 0.09
SDC1-202ENST00000381150 PCMTD1Q96MG8 357 aaPredicted RBP15.62■□□□□ 0.09
SDC1-202ENST00000381150 JADE2Q9NQC1 790 aa15.62■□□□□ 0.09
SDC1-202ENST00000381150 CHD4Q14839 1912 aa15.62■□□□□ 0.09
SDC1-202ENST00000381150 PPFIA4O75335 1185 aa15.62■□□□□ 0.09
SDC1-202ENST00000381150 BCAMP50895 628 aa15.62■□□□□ 0.09
SDC1-202ENST00000381150 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.62■□□□□ 0.09
SDC1-202ENST00000381150 IFNL3Q8IZI9 196 aa15.62■□□□□ 0.09
SDC1-202ENST00000381150 MAGEB6Q8N7X4 407 aa15.62■□□□□ 0.09
SDC1-202ENST00000381150 NCAPGQ9BPX3 1015 aa15.62■□□□□ 0.09
SDC1-202ENST00000381150 NIP7Q9Y221 180 aaKnown RBP eCLIP15.62■□□□□ 0.09
SDC1-202ENST00000381150 A0A1B0GUL6 1792 aa15.61■□□□□ 0.09
SDC1-202ENST00000381150 GSG1L2A8MUP6 293 aa15.61■□□□□ 0.09
SDC1-202ENST00000381150 CCDC152Q4G0S7 254 aa15.61■□□□□ 0.09
SDC1-202ENST00000381150 TAB2Q9NYJ8 693 aa15.61■□□□□ 0.09
SDC1-202ENST00000381150 CASZ1Q86V15 1759 aa15.61■□□□□ 0.09
SDC1-202ENST00000381150 GOLGA6CA6NDK9 693 aa15.61■□□□□ 0.09
SDC1-202ENST00000381150 GOLGA6DP0CG33 693 aa15.61■□□□□ 0.09
SDC1-202ENST00000381150 FAM217BQ9NTX9 383 aaPredicted RBP15.61■□□□□ 0.09
SDC1-202ENST00000381150 GOLGA6AQ9NYA3 693 aa15.61■□□□□ 0.09
SDC1-202ENST00000381150 NR5A1Q13285 461 aa15.6■□□□□ 0.09
SDC1-202ENST00000381150 NTRK3Q16288 839 aa15.6■□□□□ 0.09
SDC1-202ENST00000381150 FAM76AQ8TAV0 307 aa15.6■□□□□ 0.09
SDC1-202ENST00000381150 AIDAQ96BJ3 306 aa15.6■□□□□ 0.09
SDC1-202ENST00000381150 FAM212AQ96EL1 285 aa15.6■□□□□ 0.09
SDC1-202ENST00000381150 BLZF1Q9H2G9 400 aa15.6■□□□□ 0.09
SDC1-202ENST00000381150 TIAM2Q8IVF5 1701 aa15.6■□□□□ 0.09
SDC1-202ENST00000381150 ECM29Q5VYK3 1845 aa15.6■□□□□ 0.09
SDC1-202ENST00000381150 TAF1P21675 1872 aa15.6■□□□□ 0.09
SDC1-202ENST00000381150 KRT9P35527 623 aa15.6■□□□□ 0.09
SDC1-202ENST00000381150 ATP1A2P50993 1020 aa15.6■□□□□ 0.09
SDC1-202ENST00000381150 RNF187Q5TA31 235 aaPredicted RBP15.6■□□□□ 0.09
SDC1-202ENST00000381150 APOA5Q6Q788 366 aa15.6■□□□□ 0.09
SDC1-202ENST00000381150 KIAA1328Q86T90 577 aa15.6■□□□□ 0.09
SDC1-202ENST00000381150 ANKRD20A12PQ8NF67 263 aa15.6■□□□□ 0.09
SDC1-202ENST00000381150 RUFY1Q96T51 708 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 820.8 ms