RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 CTNNA3Q9UI47 895 aa17.54■□□□□ 0.4
VCX3B-201ENST00000381029 PNMA3Q9UL41 463 aa17.54■□□□□ 0.4
VCX3B-201ENST00000381029 USP17L15C9J2P7 530 aa17.53■□□□□ 0.4
VCX3B-201ENST00000381029 USP17L13C9JLJ4 530 aa17.53■□□□□ 0.4
VCX3B-201ENST00000381029 USP17L11C9JVI0 530 aa17.53■□□□□ 0.4
VCX3B-201ENST00000381029 USP17L18D6R9N7 530 aa17.53■□□□□ 0.4
VCX3B-201ENST00000381029 USP17L22D6RA61 530 aa17.53■□□□□ 0.4
VCX3B-201ENST00000381029 USP17L17D6RBQ6 530 aa17.53■□□□□ 0.4
VCX3B-201ENST00000381029 USP17L19D6RCP7 530 aa17.53■□□□□ 0.4
VCX3B-201ENST00000381029 USP17L20D6RJB6 530 aa17.53■□□□□ 0.4
VCX3B-201ENST00000381029 LACTBP83111 547 aaPredicted RBP17.53■□□□□ 0.4
VCX3B-201ENST00000381029 USP17L24Q0WX57 530 aa17.53■□□□□ 0.4
VCX3B-201ENST00000381029 IMMTQ16891 758 aaKnown RBP17.53■□□□□ 0.4
VCX3B-201ENST00000381029 RCSD1Q6JBY9 416 aa17.53■□□□□ 0.4
VCX3B-201ENST00000381029 MFSD6Q6ZSS7 791 aa17.53■□□□□ 0.4
VCX3B-201ENST00000381029 CD99L2Q8TCZ2 262 aa17.53■□□□□ 0.4
VCX3B-201ENST00000381029 ARHGAP39Q9C0H5 1083 aa17.53■□□□□ 0.4
VCX3B-201ENST00000381029 RPAP3Q9H6T3 665 aaPredicted RBP17.53■□□□□ 0.4
VCX3B-201ENST00000381029 SH2D4AQ9H788 454 aa17.53■□□□□ 0.4
VCX3B-201ENST00000381029 MORF4L1Q9UBU8 362 aa17.53■□□□□ 0.4
VCX3B-201ENST00000381029 U3KPZ7 1027 aaPredicted RBP17.53■□□□□ 0.4
VCX3B-201ENST00000381029 ZSWIM8A7E2V4 1837 aa17.52■□□□□ 0.4
VCX3B-201ENST00000381029 RANBP6O60518 1105 aaKnown RBP17.52■□□□□ 0.4
VCX3B-201ENST00000381029 PEX10O60683 326 aa17.52■□□□□ 0.4
VCX3B-201ENST00000381029 CNMDO75829 334 aa17.52■□□□□ 0.4
VCX3B-201ENST00000381029 TTLL1O95922 423 aa17.52■□□□□ 0.4
VCX3B-201ENST00000381029 OSBPP22059 807 aa17.52■□□□□ 0.4
VCX3B-201ENST00000381029 GCLCP48506 637 aaPredicted RBP17.52■□□□□ 0.4
VCX3B-201ENST00000381029 HERVK_113P62684 666 aa17.52■□□□□ 0.4
VCX3B-201ENST00000381029 FAM110CQ1W6H9 321 aa17.52■□□□□ 0.4
VCX3B-201ENST00000381029 CTU1Q7Z7A3 348 aaKnown RBP17.52■□□□□ 0.4
VCX3B-201ENST00000381029 RNF41Q9H4P4 317 aaPredicted RBP17.52■□□□□ 0.4
VCX3B-201ENST00000381029 TXNRD2Q9NNW7 524 aa17.52■□□□□ 0.4
VCX3B-201ENST00000381029 RBPJLQ9UBG7 517 aa17.52■□□□□ 0.4
VCX3B-201ENST00000381029 CLIP2Q9UDT6 1046 aa17.52■□□□□ 0.4
VCX3B-201ENST00000381029 RBM8AQ9Y5S9 174 aaKnown RBP17.52■□□□□ 0.4
VCX3B-201ENST00000381029 TSPY2A6NKD2 308 aa17.51■□□□□ 0.39
VCX3B-201ENST00000381029 SPDYE16A6NNV3 312 aaPredicted RBP17.51■□□□□ 0.39
VCX3B-201ENST00000381029 F5H6K3 240 aa17.51■□□□□ 0.39
VCX3B-201ENST00000381029 WDR46O15213 610 aaKnown RBP17.51■□□□□ 0.39
VCX3B-201ENST00000381029 NDUFB10O96000 172 aa17.51■□□□□ 0.39
VCX3B-201ENST00000381029 NT5C2P49902 561 aa17.51■□□□□ 0.39
VCX3B-201ENST00000381029 KLRC3Q07444 240 aa17.51■□□□□ 0.39
VCX3B-201ENST00000381029 NECTIN1Q15223 517 aa17.51■□□□□ 0.39
VCX3B-201ENST00000381029 STOX1Q6ZVD7 989 aa17.51■□□□□ 0.39
VCX3B-201ENST00000381029 OTOP1Q7RTM1 612 aa17.51■□□□□ 0.39
VCX3B-201ENST00000381029 SPICE1Q8N0Z3 855 aa17.51■□□□□ 0.39
VCX3B-201ENST00000381029 GMCL1P1Q8NEA9 526 aa17.51■□□□□ 0.39
VCX3B-201ENST00000381029 ERO1AQ96HE7 468 aa17.51■□□□□ 0.39
VCX3B-201ENST00000381029 PARP14Q460N5 1801 aa17.5■□□□□ 0.39
VCX3B-201ENST00000381029 IRX3P78415 501 aaPredicted RBP17.5■□□□□ 0.39
VCX3B-201ENST00000381029 ATP2B2Q01814 1243 aa17.5■□□□□ 0.39
VCX3B-201ENST00000381029 RRP12Q5JTH9 1297 aaKnown RBP17.5■□□□□ 0.39
VCX3B-201ENST00000381029 ANKRD13CQ8N6S4 541 aa17.5■□□□□ 0.39
VCX3B-201ENST00000381029 SMCR8Q8TEV9 937 aaPredicted RBP17.5■□□□□ 0.39
VCX3B-201ENST00000381029 TRIM47Q96LD4 638 aa17.5■□□□□ 0.39
VCX3B-201ENST00000381029 GOPCQ9HD26 462 aa17.5■□□□□ 0.39
VCX3B-201ENST00000381029 ZSWIM5Q9P217 1185 aa17.5■□□□□ 0.39
VCX3B-201ENST00000381029 ADAMTS5Q9UNA0 930 aa17.5■□□□□ 0.39
VCX3B-201ENST00000381029 A0A0G2JMZ2 1700 aa17.5■□□□□ 0.39
VCX3B-201ENST00000381029 B4E1Z4 1266 aa17.49■□□□□ 0.39
VCX3B-201ENST00000381029 COL9A3Q14050 684 aaPredicted RBP17.49■□□□□ 0.39
VCX3B-201ENST00000381029 LRRC47Q8N1G4 583 aaKnown RBP17.49■□□□□ 0.39
VCX3B-201ENST00000381029 ANKS1AQ92625 1134 aa17.49■□□□□ 0.39
VCX3B-201ENST00000381029 ESR2Q92731 530 aa17.49■□□□□ 0.39
VCX3B-201ENST00000381029 MCOLN1Q9GZU1 580 aa17.49■□□□□ 0.39
VCX3B-201ENST00000381029 FBXO28Q9NVF7 368 aa17.49■□□□□ 0.39
VCX3B-201ENST00000381029 MYH4Q9Y623 1939 aa17.49■□□□□ 0.39
VCX3B-201ENST00000381029 MYPNQ86TC9 1320 aa17.48■□□□□ 0.39
VCX3B-201ENST00000381029 KDM4AO75164 1064 aa17.48■□□□□ 0.39
VCX3B-201ENST00000381029 COG2Q14746 738 aa17.48■□□□□ 0.39
VCX3B-201ENST00000381029 Q3C1V9 767 aa17.48■□□□□ 0.39
VCX3B-201ENST00000381029 RASGRP2Q7LDG7 609 aa17.48■□□□□ 0.39
VCX3B-201ENST00000381029 NUP88Q99567 741 aaPredicted RBP17.48■□□□□ 0.39
VCX3B-201ENST00000381029 TOMM22Q9NS69 142 aa17.48■□□□□ 0.39
VCX3B-201ENST00000381029 BTBD7Q9P203 1132 aa17.48■□□□□ 0.39
VCX3B-201ENST00000381029 E7EWF7 191 aa17.47■□□□□ 0.39
VCX3B-201ENST00000381029 SLC27A2O14975 620 aa17.47■□□□□ 0.39
VCX3B-201ENST00000381029 DSG3P32926 999 aa17.47■□□□□ 0.39
VCX3B-201ENST00000381029 FAM83BQ5T0W9 1011 aa17.47■□□□□ 0.39
VCX3B-201ENST00000381029 CYB5R4Q7L1T6 521 aa17.47■□□□□ 0.39
VCX3B-201ENST00000381029 REPS2Q8NFH8 660 aa17.47■□□□□ 0.39
VCX3B-201ENST00000381029 GTF3C2Q8WUA4 911 aaPredicted RBP17.47■□□□□ 0.39
VCX3B-201ENST00000381029 TTC14Q96N46 770 aa17.47■□□□□ 0.39
VCX3B-201ENST00000381029 TMEM47Q9BQJ4 181 aa17.47■□□□□ 0.39
VCX3B-201ENST00000381029 CNNM2Q9H8M5 875 aa17.47■□□□□ 0.39
VCX3B-201ENST00000381029 EFCC1Q9HA90 598 aa17.47■□□□□ 0.39
VCX3B-201ENST00000381029 ANO2Q9NQ90 1003 aa17.47■□□□□ 0.39
VCX3B-201ENST00000381029 RABGAP1Q9Y3P9 1069 aa17.47■□□□□ 0.39
VCX3B-201ENST00000381029 PSMC4P43686 418 aa17.46■□□□□ 0.39
VCX3B-201ENST00000381029 ERVK-9P63128 1117 aa17.46■□□□□ 0.39
VCX3B-201ENST00000381029 ERVK-24P63145 666 aa17.46■□□□□ 0.39
VCX3B-201ENST00000381029 SEC23AQ15436 765 aa17.46■□□□□ 0.39
VCX3B-201ENST00000381029 PPP4R3BQ5MIZ7 849 aa17.46■□□□□ 0.39
VCX3B-201ENST00000381029 CREB3L3Q68CJ9 461 aa17.46■□□□□ 0.39
VCX3B-201ENST00000381029 KIAA1211Q6ZU35 1233 aa17.46■□□□□ 0.39
VCX3B-201ENST00000381029 MB21D2Q8IYB1 491 aaPredicted RBP17.46■□□□□ 0.39
VCX3B-201ENST00000381029 ATG4CQ96DT6 458 aa17.46■□□□□ 0.39
VCX3B-201ENST00000381029 GMCL1Q96IK5 515 aa17.46■□□□□ 0.39
VCX3B-201ENST00000381029 KRT23Q9C075 422 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms