RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 MEGF6O75095 1541 aa13.76□□□□□ -0.21
GABPB1-203ENST00000380877 CLRN2A0PK11 232 aa13.76□□□□□ -0.21
GABPB1-203ENST00000380877 CSF1RP07333 972 aa13.76□□□□□ -0.21
GABPB1-203ENST00000380877 KIF23Q02241 960 aaPredicted RBP13.76□□□□□ -0.21
GABPB1-203ENST00000380877 ARID5AQ03989 594 aa13.76□□□□□ -0.21
GABPB1-203ENST00000380877 CC2D2BQ6DHV5 1058 aa13.76□□□□□ -0.21
GABPB1-203ENST00000380877 CNGA4Q8IV77 575 aa13.76□□□□□ -0.21
GABPB1-203ENST00000380877 TBC1D5Q92609 795 aa13.76□□□□□ -0.21
GABPB1-203ENST00000380877 FOXP1Q9H334 677 aaPredicted RBP13.76□□□□□ -0.21
GABPB1-203ENST00000380877 CENPHQ9H3R5 247 aa13.76□□□□□ -0.21
GABPB1-203ENST00000380877 HOMER2Q9NSB8 354 aa13.76□□□□□ -0.21
GABPB1-203ENST00000380877 SWAP70Q9UH65 585 aa13.76□□□□□ -0.21
GABPB1-203ENST00000380877 ZBED4O75132 1171 aa13.76□□□□□ -0.21
GABPB1-203ENST00000380877 TBC1D8BQ0IIM8 1120 aa13.76□□□□□ -0.21
GABPB1-203ENST00000380877 ITPK1Q13572 414 aa13.76□□□□□ -0.21
GABPB1-203ENST00000380877 TBC1D10CQ8IV04 446 aa13.76□□□□□ -0.21
GABPB1-203ENST00000380877 CCDC102AQ96A19 550 aa13.76□□□□□ -0.21
GABPB1-203ENST00000380877 ABCC12Q96J65 1359 aa13.76□□□□□ -0.21
GABPB1-203ENST00000380877 A0A1W2PQ27 194 aa13.75□□□□□ -0.21
GABPB1-203ENST00000380877 A0A1W2PQ64 194 aa13.75□□□□□ -0.21
GABPB1-203ENST00000380877 A0A1W2PQD8 194 aa13.75□□□□□ -0.21
GABPB1-203ENST00000380877 NDUFA8P51970 172 aa13.75□□□□□ -0.21
GABPB1-203ENST00000380877 PTGDRQ13258 359 aa13.75□□□□□ -0.21
GABPB1-203ENST00000380877 NEK8Q86SG6 692 aa13.75□□□□□ -0.21
GABPB1-203ENST00000380877 CSRNP1Q96S65 589 aa13.75□□□□□ -0.21
GABPB1-203ENST00000380877 CRACR2AQ9BSW2 395 aa13.75□□□□□ -0.21
GABPB1-203ENST00000380877 CD209Q9NNX6 404 aa13.75□□□□□ -0.21
GABPB1-203ENST00000380877 UTYO14607 1347 aa13.75□□□□□ -0.21
GABPB1-203ENST00000380877 HERC4Q5GLZ8 1057 aaPredicted RBP13.75□□□□□ -0.21
GABPB1-203ENST00000380877 DYMQ7RTS9 669 aa13.75□□□□□ -0.21
GABPB1-203ENST00000380877 BLZF1Q9H2G9 400 aa13.75□□□□□ -0.21
GABPB1-203ENST00000380877 MYCLP12524 364 aaPredicted RBP13.75□□□□□ -0.21
GABPB1-203ENST00000380877 HSPA1LP34931 641 aa13.75□□□□□ -0.21
GABPB1-203ENST00000380877 RC3H1Q5TC82 1133 aaKnown RBP13.75□□□□□ -0.21
GABPB1-203ENST00000380877 FTOQ9C0B1 505 aaKnown RBP eCLIP13.75□□□□□ -0.21
GABPB1-203ENST00000380877 POLR3EQ9NVU0 708 aa13.75□□□□□ -0.21
GABPB1-203ENST00000380877 GPATCH4Q5T3I0 446 aaKnown RBP13.75□□□□□ -0.21
GABPB1-203ENST00000380877 GAS2L3Q86XJ1 694 aa13.75□□□□□ -0.21
GABPB1-203ENST00000380877 IGSF22Q8N9C0 903 aa13.75□□□□□ -0.21
GABPB1-203ENST00000380877 TTC14Q96N46 770 aa13.75□□□□□ -0.21
GABPB1-203ENST00000380877 NOC4LQ9BVI4 516 aaKnown RBP13.75□□□□□ -0.21
GABPB1-203ENST00000380877 TRMT44Q8IYL2 757 aaKnown RBP13.74□□□□□ -0.21
GABPB1-203ENST00000380877 AIFM3Q96NN9 605 aa13.74□□□□□ -0.21
GABPB1-203ENST00000380877 PUF60Q9UHX1 559 aaKnown RBP13.74□□□□□ -0.21
GABPB1-203ENST00000380877 AKR1B15C9JRZ8 316 aaPredicted RBP13.74□□□□□ -0.21
GABPB1-203ENST00000380877 RAD17O75943 681 aa13.74□□□□□ -0.21
GABPB1-203ENST00000380877 CCDC93Q567U6 631 aa13.74□□□□□ -0.21
GABPB1-203ENST00000380877 DNAI2Q9GZS0 605 aa13.74□□□□□ -0.21
GABPB1-203ENST00000380877 RCOR1Q9UKL0 485 aa13.74□□□□□ -0.21
GABPB1-203ENST00000380877 DNM3Q9UQ16 869 aa13.74□□□□□ -0.21
GABPB1-203ENST00000380877 KIF20BQ96Q89 1820 aa13.74□□□□□ -0.21
GABPB1-203ENST00000380877 TTLL1O95922 423 aa13.74□□□□□ -0.21
GABPB1-203ENST00000380877 RFX5P48382 616 aaPredicted RBP13.74□□□□□ -0.21
GABPB1-203ENST00000380877 KRT83P78385 493 aa13.74□□□□□ -0.21
GABPB1-203ENST00000380877 MAP9Q49MG5 647 aa13.74□□□□□ -0.21
GABPB1-203ENST00000380877 STAG1Q8WVM7 1258 aa13.74□□□□□ -0.21
GABPB1-203ENST00000380877 FAM84BQ96KN1 310 aaPredicted RBP13.74□□□□□ -0.21
GABPB1-203ENST00000380877 BAG1Q99933 345 aaPredicted RBP13.74□□□□□ -0.21
GABPB1-203ENST00000380877 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.74□□□□□ -0.21
GABPB1-203ENST00000380877 OR52Z1P0C646 297 aa13.74□□□□□ -0.21
GABPB1-203ENST00000380877 ASPRV1Q53RT3 343 aa13.74□□□□□ -0.21
GABPB1-203ENST00000380877 KRBA2Q6ZNG9 492 aa13.74□□□□□ -0.21
GABPB1-203ENST00000380877 FBXO11Q86XK2 927 aa13.74□□□□□ -0.21
GABPB1-203ENST00000380877 PCDHA1Q9Y5I3 950 aa13.74□□□□□ -0.21
GABPB1-203ENST00000380877 ARHGEF35A5YM69 484 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 TMEM232C9JQI7 657 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 PHACTR2O75167 634 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 KIF5AQ12840 1032 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 NR5A1Q13285 461 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 LINC00116Q8NCU8 138 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 KIF2CQ99661 725 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 PLEKHG2Q9H7P9 1386 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 RESTQ13127 1097 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 SF3B3Q15393 1217 aaKnown RBP13.73□□□□□ -0.21
GABPB1-203ENST00000380877 ZNF408Q9H9D4 720 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 GRM1Q13255 1194 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 IFI16Q16666 785 aaKnown RBP13.73□□□□□ -0.21
GABPB1-203ENST00000380877 DCAF17Q5H9S7 520 aaPredicted RBP13.73□□□□□ -0.21
GABPB1-203ENST00000380877 DCAF15Q66K64 600 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 TMED8Q6PL24 325 aaPredicted RBP13.73□□□□□ -0.21
GABPB1-203ENST00000380877 INCENPQ9NQS7 918 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 MACROD2A1Z1Q3 448 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 USP17L3A6NCW0 530 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 USP17L4A6NCW7 530 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 DDX39AO00148 427 aaKnown RBP13.73□□□□□ -0.21
GABPB1-203ENST00000380877 MMP1P03956 469 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 TUBB4AP04350 444 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 MCM3P25205 808 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 TECP42680 631 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 RAD51AP2Q09MP3 1159 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 PRPF4BQ13523 1007 aaKnown RBP13.73□□□□□ -0.21
GABPB1-203ENST00000380877 KARSQ15046 597 aaKnown RBP13.73□□□□□ -0.21
GABPB1-203ENST00000380877 USP17L1Q7RTZ2 530 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 TTLL6Q8N841 843 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 LINC00301Q8NCQ3 95 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 DRC1Q96MC2 740 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 DHX36Q9H2U1 1008 aaKnown RBP13.73□□□□□ -0.21
GABPB1-203ENST00000380877 KANSL2Q9H9L4 492 aa13.73□□□□□ -0.21
GABPB1-203ENST00000380877 KRT86O43790 486 aa13.72□□□□□ -0.21
GABPB1-203ENST00000380877 ALX1Q15699 326 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms