RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 SCRN1Q12765 414 aa16.49■□□□□ 0.23
HERPUD1-203ENST00000379792 SCYL3Q8IZE3 742 aa16.49■□□□□ 0.23
HERPUD1-203ENST00000379792 PICK1Q9NRD5 415 aa16.49■□□□□ 0.23
HERPUD1-203ENST00000379792 NYAP2Q9P242 653 aa16.49■□□□□ 0.23
HERPUD1-203ENST00000379792 GOLGA8AA7E2F4 631 aa16.49■□□□□ 0.23
HERPUD1-203ENST00000379792 PPFIA3O75145 1194 aa16.49■□□□□ 0.23
HERPUD1-203ENST00000379792 HSP90AA1P07900 732 aaKnown RBP16.49■□□□□ 0.23
HERPUD1-203ENST00000379792 ECE1P42892 770 aa16.49■□□□□ 0.23
HERPUD1-203ENST00000379792 IREB2P48200 963 aaKnown RBP16.49■□□□□ 0.23
HERPUD1-203ENST00000379792 METAP2P50579 478 aaKnown RBP eCLIP16.49■□□□□ 0.23
HERPUD1-203ENST00000379792 TROAPQ12815 778 aa16.49■□□□□ 0.23
HERPUD1-203ENST00000379792 VGLL4Q14135 290 aa16.49■□□□□ 0.23
HERPUD1-203ENST00000379792 JMYQ8N9B5 988 aa16.49■□□□□ 0.23
HERPUD1-203ENST00000379792 GTF3C6Q969F1 213 aa16.49■□□□□ 0.23
HERPUD1-203ENST00000379792 CLMNQ96JQ2 1002 aa16.49■□□□□ 0.23
HERPUD1-203ENST00000379792 GREB1LQ9C091 1923 aaPredicted RBP16.48■□□□□ 0.23
HERPUD1-203ENST00000379792 TRPM7Q96QT4 1865 aa16.48■□□□□ 0.23
HERPUD1-203ENST00000379792 CELF2O95319 508 aaKnown RBP16.48■□□□□ 0.23
HERPUD1-203ENST00000379792 CDC27P30260 824 aa16.48■□□□□ 0.23
HERPUD1-203ENST00000379792 ADD1P35611 737 aaKnown RBP16.48■□□□□ 0.23
HERPUD1-203ENST00000379792 FAM217BQ9NTX9 383 aaPredicted RBP16.48■□□□□ 0.23
HERPUD1-203ENST00000379792 USP17L5A8MUK1 530 aa16.47■□□□□ 0.23
HERPUD1-203ENST00000379792 PTPRAP18433 802 aa16.47■□□□□ 0.23
HERPUD1-203ENST00000379792 CUL4AQ13619 759 aa16.47■□□□□ 0.23
HERPUD1-203ENST00000379792 ZYXQ15942 572 aaKnown RBP16.47■□□□□ 0.23
HERPUD1-203ENST00000379792 ARMC9Q7Z3E5 817 aa16.47■□□□□ 0.23
HERPUD1-203ENST00000379792 CMTR1Q8N1G2 835 aaKnown RBP16.47■□□□□ 0.23
HERPUD1-203ENST00000379792 FANCBQ8NB91 859 aa16.47■□□□□ 0.23
HERPUD1-203ENST00000379792 MKL1Q969V6 931 aa16.47■□□□□ 0.23
HERPUD1-203ENST00000379792 ARHGEF10LQ9HCE6 1279 aa16.47■□□□□ 0.23
HERPUD1-203ENST00000379792 SNCAIPQ9Y6H5 919 aa16.47■□□□□ 0.23
HERPUD1-203ENST00000379792 DDAH1O94760 285 aa16.46■□□□□ 0.23
HERPUD1-203ENST00000379792 RTN1Q16799 776 aa16.46■□□□□ 0.23
HERPUD1-203ENST00000379792 PPP4R3BQ5MIZ7 849 aa16.46■□□□□ 0.23
HERPUD1-203ENST00000379792 CNKSR2Q8WXI2 1034 aa16.46■□□□□ 0.23
HERPUD1-203ENST00000379792 ELP3Q9H9T3 547 aa16.46■□□□□ 0.23
HERPUD1-203ENST00000379792 CSADQ9Y600 493 aa16.46■□□□□ 0.23
HERPUD1-203ENST00000379792 ZHX2Q9Y6X8 837 aa16.46■□□□□ 0.23
HERPUD1-203ENST00000379792 GOLGA8HP0CJ92 632 aa16.46■□□□□ 0.22
HERPUD1-203ENST00000379792 KIAA1755Q5JYT7 1200 aa16.46■□□□□ 0.22
HERPUD1-203ENST00000379792 NOL9Q5SY16 702 aaKnown RBP16.46■□□□□ 0.22
HERPUD1-203ENST00000379792 CST9Q5W186 159 aa16.46■□□□□ 0.22
HERPUD1-203ENST00000379792 USP17L2Q6R6M4 530 aa16.46■□□□□ 0.22
HERPUD1-203ENST00000379792 CCDC82Q8N4S0 544 aa16.46■□□□□ 0.22
HERPUD1-203ENST00000379792 GBA2Q9HCG7 927 aaPredicted RBP16.46■□□□□ 0.22
HERPUD1-203ENST00000379792 GINM1Q9NU53 330 aa16.46■□□□□ 0.22
HERPUD1-203ENST00000379792 RASSF10A6NK89 507 aa16.45■□□□□ 0.22
HERPUD1-203ENST00000379792 F5H6K3 240 aa16.45■□□□□ 0.22
HERPUD1-203ENST00000379792 CTDNEP1O95476 244 aa16.45■□□□□ 0.22
HERPUD1-203ENST00000379792 CALM1P0DP23 149 aa16.45■□□□□ 0.22
HERPUD1-203ENST00000379792 CALM2P0DP24 149 aa16.45■□□□□ 0.22
HERPUD1-203ENST00000379792 CALM3P0DP25 149 aa16.45■□□□□ 0.22
HERPUD1-203ENST00000379792 KLRC3Q07444 240 aa16.45■□□□□ 0.22
HERPUD1-203ENST00000379792 SPP2Q13103 211 aa16.45■□□□□ 0.22
HERPUD1-203ENST00000379792 MAP3K11Q16584 847 aa16.45■□□□□ 0.22
HERPUD1-203ENST00000379792 ANKRD13AQ8IZ07 590 aa16.45■□□□□ 0.22
HERPUD1-203ENST00000379792 SPICE1Q8N0Z3 855 aa16.45■□□□□ 0.22
HERPUD1-203ENST00000379792 STAG2Q8N3U4 1231 aa16.45■□□□□ 0.22
HERPUD1-203ENST00000379792 CTCFLQ8NI51 663 aaPredicted RBP16.45■□□□□ 0.22
HERPUD1-203ENST00000379792 FEZ1Q99689 392 aa16.45■□□□□ 0.22
HERPUD1-203ENST00000379792 TMX2Q9Y320 296 aa16.45■□□□□ 0.22
HERPUD1-203ENST00000379792 FRMPD2Q68DX3 1309 aaPredicted RBP16.44■□□□□ 0.22
HERPUD1-203ENST00000379792 JAK2O60674 1132 aa16.44■□□□□ 0.22
HERPUD1-203ENST00000379792 PLEKHA8P1O95397 391 aa16.44■□□□□ 0.22
HERPUD1-203ENST00000379792 PDHBP11177 359 aa16.44■□□□□ 0.22
HERPUD1-203ENST00000379792 DGKZQ13574 1117 aa16.44■□□□□ 0.22
HERPUD1-203ENST00000379792 GRM4Q14833 912 aa16.44■□□□□ 0.22
HERPUD1-203ENST00000379792 SLFN13Q68D06 897 aa16.44■□□□□ 0.22
HERPUD1-203ENST00000379792 NUP88Q99567 741 aaPredicted RBP16.44■□□□□ 0.22
HERPUD1-203ENST00000379792 GPCPD1Q9NPB8 672 aa16.44■□□□□ 0.22
HERPUD1-203ENST00000379792 ISY1Q9ULR0 285 aaKnown RBP16.44■□□□□ 0.22
HERPUD1-203ENST00000379792 TRIM75PA6NK02 468 aa16.43■□□□□ 0.22
HERPUD1-203ENST00000379792 CPLX1O14810 134 aa16.43■□□□□ 0.22
HERPUD1-203ENST00000379792 NDUFB10O96000 172 aa16.43■□□□□ 0.22
HERPUD1-203ENST00000379792 LDLRAD1Q5T700 205 aa16.43■□□□□ 0.22
HERPUD1-203ENST00000379792 KCTD1Q719H9 257 aa16.43■□□□□ 0.22
HERPUD1-203ENST00000379792 C2orf69Q8N8R5 385 aa16.43■□□□□ 0.22
HERPUD1-203ENST00000379792 DDX11Q96FC9 970 aa16.43■□□□□ 0.22
HERPUD1-203ENST00000379792 CPVLQ9H3G5 476 aa16.43■□□□□ 0.22
HERPUD1-203ENST00000379792 MAD2L2Q9UI95 211 aa16.43■□□□□ 0.22
HERPUD1-203ENST00000379792 ATAD5Q96QE3 1844 aa16.43■□□□□ 0.22
HERPUD1-203ENST00000379792 PARP1P09874 1014 aaKnown RBP16.43■□□□□ 0.22
HERPUD1-203ENST00000379792 RCAN1P53805 252 aa16.43■□□□□ 0.22
HERPUD1-203ENST00000379792 MTMR2Q13614 643 aa16.43■□□□□ 0.22
HERPUD1-203ENST00000379792 CCDC96Q2M329 555 aa16.43■□□□□ 0.22
HERPUD1-203ENST00000379792 ZNF280CQ8ND82 737 aa16.43■□□□□ 0.22
HERPUD1-203ENST00000379792 NSUN7Q8NE18 718 aaKnown RBP16.43■□□□□ 0.22
HERPUD1-203ENST00000379792 PHKBQ93100 1093 aa16.43■□□□□ 0.22
HERPUD1-203ENST00000379792 ABT1Q9ULW3 272 aaKnown RBP16.43■□□□□ 0.22
HERPUD1-203ENST00000379792 DOCK1Q14185 1865 aa16.43■□□□□ 0.22
HERPUD1-203ENST00000379792 DHX16O60231 1041 aaKnown RBP16.42■□□□□ 0.22
HERPUD1-203ENST00000379792 KIF5BP33176 963 aa16.42■□□□□ 0.22
HERPUD1-203ENST00000379792 NTRK3Q16288 839 aa16.42■□□□□ 0.22
HERPUD1-203ENST00000379792 DEFB115Q30KQ5 88 aa16.42■□□□□ 0.22
HERPUD1-203ENST00000379792 TTBK2Q6IQ55 1244 aa16.42■□□□□ 0.22
HERPUD1-203ENST00000379792 NBPF11Q86T75 865 aa16.42■□□□□ 0.22
HERPUD1-203ENST00000379792 GMCL1P1Q8NEA9 526 aa16.42■□□□□ 0.22
HERPUD1-203ENST00000379792 PIBF1Q8WXW3 757 aa16.42■□□□□ 0.22
HERPUD1-203ENST00000379792 SLC10A4Q96EP9 437 aa16.42■□□□□ 0.22
HERPUD1-203ENST00000379792 OTUD5Q96G74 571 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms