RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 WHAMMQ8TF30 809 aa9.46□□□□□ -0.89
NHLRC3-201ENST00000379599 PRCCQ92733 491 aaPredicted RBP9.46□□□□□ -0.89
NHLRC3-201ENST00000379599 CNKSR1Q969H4 720 aa9.46□□□□□ -0.89
NHLRC3-201ENST00000379599 FAM81BQ96LP2 452 aa9.46□□□□□ -0.89
NHLRC3-201ENST00000379599 CCDC43Q96MW1 224 aaKnown RBP9.46□□□□□ -0.89
NHLRC3-201ENST00000379599 SLF1Q9BQI6 1058 aa9.46□□□□□ -0.89
NHLRC3-201ENST00000379599 ADGRL3Q9HAR2 1447 aa9.46□□□□□ -0.89
NHLRC3-201ENST00000379599 MYO5CQ9NQX4 1742 aa9.46□□□□□ -0.89
NHLRC3-201ENST00000379599 ZNF510Q9Y2H8 683 aa9.46□□□□□ -0.89
NHLRC3-201ENST00000379599 FAM200BP0CF97 657 aa9.46□□□□□ -0.89
NHLRC3-201ENST00000379599 FUT4P22083 530 aa9.46□□□□□ -0.89
NHLRC3-201ENST00000379599 ZC3H6P61129 1189 aaKnown RBP9.46□□□□□ -0.89
NHLRC3-201ENST00000379599 AMPD2Q01433 879 aa9.46□□□□□ -0.89
NHLRC3-201ENST00000379599 RBL2Q08999 1139 aa9.46□□□□□ -0.89
NHLRC3-201ENST00000379599 ADAM9Q13443 819 aa9.46□□□□□ -0.89
NHLRC3-201ENST00000379599 ADALQ6DHV7 355 aa9.46□□□□□ -0.89
NHLRC3-201ENST00000379599 LONP2Q86WA8 852 aa9.46□□□□□ -0.89
NHLRC3-201ENST00000379599 NDNQ99608 321 aa9.46□□□□□ -0.89
NHLRC3-201ENST00000379599 ZNHIT6Q9NWK9 470 aaKnown RBP9.46□□□□□ -0.89
NHLRC3-201ENST00000379599 PHF24Q9UPV7 400 aa9.46□□□□□ -0.89
NHLRC3-201ENST00000379599 STK38LQ9Y2H1 464 aa9.46□□□□□ -0.89
NHLRC3-201ENST00000379599 ADGRB2O60241 1585 aa9.46□□□□□ -0.9
NHLRC3-201ENST00000379599 KIAA0556O60303 1618 aa9.46□□□□□ -0.9
NHLRC3-201ENST00000379599 PNMA6EA0A0J9YXQ4 647 aa9.46□□□□□ -0.9
NHLRC3-201ENST00000379599 EZH2Q15910 746 aaKnown RBP9.46□□□□□ -0.9
NHLRC3-201ENST00000379599 LACTB2Q53H82 288 aaPredicted RBP9.46□□□□□ -0.9
NHLRC3-201ENST00000379599 CCDC92Q53HC0 331 aaPredicted RBP9.46□□□□□ -0.9
NHLRC3-201ENST00000379599 SAPCD2Q86UD0 394 aa9.46□□□□□ -0.9
NHLRC3-201ENST00000379599 HDAC7Q8WUI4 952 aa9.46□□□□□ -0.9
NHLRC3-201ENST00000379599 PPP1R12CQ9BZL4 782 aa9.46□□□□□ -0.9
NHLRC3-201ENST00000379599 ARHGEF10LQ9HCE6 1279 aa9.46□□□□□ -0.9
NHLRC3-201ENST00000379599 NLRP2Q9NX02 1062 aa9.46□□□□□ -0.9
NHLRC3-201ENST00000379599 DLGAP2Q9P1A6 1054 aa9.46□□□□□ -0.9
NHLRC3-201ENST00000379599 ABCF2Q9UG63 623 aa9.46□□□□□ -0.9
NHLRC3-201ENST00000379599 SWAP70Q9UH65 585 aa9.46□□□□□ -0.9
NHLRC3-201ENST00000379599 CEP131Q9UPN4 1083 aa9.46□□□□□ -0.9
NHLRC3-201ENST00000379599 ERVK-7P63135 1459 aa9.46□□□□□ -0.9
NHLRC3-201ENST00000379599 NPTXRO95502 500 aa9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 ATP1A1P05023 1023 aaKnown RBP9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 VIL1P09327 827 aaKnown RBP9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 MYL6BP14649 208 aa9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 ATP2A2P16615 1042 aaKnown RBP9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 CCND1P24385 295 aa9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 STAT6P42226 847 aa9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 TCERG1LQ5VWI1 586 aa9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 RASGRP2Q7LDG7 609 aa9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 LCA5Q86VQ0 697 aa9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 AFAP1Q8N556 730 aa9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 PANX2Q96RD6 677 aa9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 SYT15Q9BQS2 421 aa9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 NACA2Q9H009 215 aa9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 ATXN10Q9UBB4 475 aa9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 TRIM10Q9UDY6 481 aa9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 ZNF185O15231 689 aa9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 CEP104O60308 925 aa9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 RFC5P40937 340 aa9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 MRPS35P82673 323 aaKnown RBP9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 PNOCQ13519 176 aa9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 CCDC102BQ68D86 513 aa9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 CCDC80Q76M96 950 aa9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 TRMT44Q8IYL2 757 aaKnown RBP9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 NBPF15Q8N660 670 aa9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 DDX27Q96GQ7 796 aaKnown RBP9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 JADE2Q9NQC1 790 aa9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 DMGDHQ9UI17 866 aaKnown RBP9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 LNPEPQ9UIQ6 1025 aa9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 NFE2L3Q9Y4A8 694 aa9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 KDRP35968 1356 aa9.45□□□□□ -0.9
NHLRC3-201ENST00000379599 PHF20L1A8MW92 1017 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 RIPK1Q13546 671 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 ANO7Q6IWH7 933 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 C16orf87Q6PH81 154 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 TRAPPC11Q7Z392 1133 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 CCT6BQ92526 530 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 JAKMIP2Q96AA8 810 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 RPS6KC1Q96S38 1066 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 PAIP2BQ9ULR5 123 aaKnown RBP9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 KIAA0232Q92628 1395 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 NUTM2FA1L443 756 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 PPIP5K2O43314 1243 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 SUPT3HO75486 399 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 TRIM37O94972 964 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 TMOD1P28289 359 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 EPHB4P54760 987 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 INHBCP55103 352 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 CBX3Q13185 183 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 IQCEQ6IPM2 695 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 ARFGAP2Q8N6H7 521 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 CTNNBL1Q8WYA6 563 aaPredicted RBP9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 RPGRIP1Q96KN7 1286 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 PHACTR3Q96KR7 559 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 LRRC1Q9BTT6 524 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 NAA15Q9BXJ9 866 aaKnown RBP9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 NDST4Q9H3R1 872 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 CEP152O94986 1710 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 POLR3DP05423 398 aaPredicted RBP9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 TOB2Q14106 344 aaPredicted RBP9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 MYBPC2Q14324 1141 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms