RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 DKC1O60832 514 aaKnown RBP eCLIP7.41□□□□□ -1.22
NEDD9-202ENST00000379446 ERLIN2O94905 339 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 SRGAP2BP0DMP2 458 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 IFRD2Q12894 506 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-202ENST00000379446 SNRNP48Q6IEG0 339 aaKnown RBP7.41□□□□□ -1.22
NEDD9-202ENST00000379446 ERO1BQ86YB8 467 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 PROCA1Q8NCQ7 364 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-202ENST00000379446 AGBL3Q8NEM8 1001 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 FBXO40Q9UH90 709 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 CNTNAP4Q9C0A0 1308 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 ZC3H13Q5T200 1668 aaKnown RBP7.41□□□□□ -1.22
NEDD9-202ENST00000379446 MCM5P33992 734 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 C7orf61Q8IZ16 206 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 NECAB1Q8N987 351 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 GANCQ8TET4 914 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 C16orf45Q96MC5 204 aaPredicted RBP7.4□□□□□ -1.22
NEDD9-202ENST00000379446 KANSL2Q9H9L4 492 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 PNPLA7Q6ZV29 1317 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 STX6O43752 255 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 FARP2O94887 1054 aaPredicted RBP7.4□□□□□ -1.22
NEDD9-202ENST00000379446 GNAT1P11488 350 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 EIF5P55010 431 aaKnown RBP7.4□□□□□ -1.22
NEDD9-202ENST00000379446 NOLC1Q14978 699 aaKnown RBP eCLIP7.4□□□□□ -1.22
NEDD9-202ENST00000379446 DEFB128Q7Z7B8 93 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 ZKSCAN4Q969J2 545 aaPredicted RBP7.4□□□□□ -1.22
NEDD9-202ENST00000379446 IFT74Q96LB3 600 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 LRRC2Q9BYS8 371 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 SYNCQ9H7C4 482 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 SLC28A3Q9HAS3 691 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 STARD7Q9NQZ5 370 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 FPGT-TNNI3KV9GXZ4 949 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 ZNF532Q9HCE3 1301 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 ALKQ9UM73 1620 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 CD163L1Q9NR16 1453 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 USP17L15C9J2P7 530 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 USP17L13C9JLJ4 530 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 USP17L11C9JVI0 530 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 USP17L18D6R9N7 530 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 USP17L22D6RA61 530 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 USP17L17D6RBQ6 530 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 USP17L19D6RCP7 530 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 USP17L20D6RJB6 530 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 SRGNP10124 158 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 PDCP20941 246 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 GNA11P29992 359 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 DDIT3P35638 169 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 ME1P48163 572 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 ZNF445P59923 1031 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 USP17L24Q0WX57 530 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 FSTL1Q12841 308 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 PPP2R5BQ15173 497 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 CAMK4Q16566 473 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 INF2Q27J81 1249 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 ADPGKQ9BRR6 497 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 TMEM39BQ9GZU3 492 aa7.4□□□□□ -1.22
NEDD9-202ENST00000379446 FRMPD1Q5SYB0 1578 aa7.4□□□□□ -1.23
NEDD9-202ENST00000379446 DMTNQ08495 405 aa7.4□□□□□ -1.23
NEDD9-202ENST00000379446 MTMR2Q13614 643 aa7.4□□□□□ -1.23
NEDD9-202ENST00000379446 GIMAP6Q6P9H5 292 aa7.4□□□□□ -1.23
NEDD9-202ENST00000379446 USP17L2Q6R6M4 530 aa7.4□□□□□ -1.23
NEDD9-202ENST00000379446 LRRC4BQ9NT99 713 aa7.4□□□□□ -1.23
NEDD9-202ENST00000379446 FBXL21Q9UKT6 434 aa7.4□□□□□ -1.23
NEDD9-202ENST00000379446 KLF18A0A0U1RQI7 1052 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 PGBD3Q8N328 593 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 TMX1Q9H3N1 280 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 ZNF70Q9UC06 446 aaPredicted RBP7.39□□□□□ -1.23
NEDD9-202ENST00000379446 PARP2Q9UGN5 583 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 PPLO60437 1756 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 AOC2O75106 756 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 CTSHP09668 335 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 MARK3P27448 753 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 STAT3P40763 770 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 AK2P54819 239 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 TNNI3KQ59H18 835 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 LARP1BQ659C4 914 aaKnown RBP7.39□□□□□ -1.23
NEDD9-202ENST00000379446 CCDC84Q86UT8 332 aaPredicted RBP7.39□□□□□ -1.23
NEDD9-202ENST00000379446 FBXO11Q86XK2 927 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 EDC3Q96F86 508 aaKnown RBP7.39□□□□□ -1.23
NEDD9-202ENST00000379446 RTEL1Q9NZ71 1219 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 LIMCH1Q9UPQ0 1083 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 PIK3C2BO00750 1634 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 NBPF26B4DH59 902 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 GCOM1H8Y6P7 765 aaPredicted RBP7.39□□□□□ -1.23
NEDD9-202ENST00000379446 POLR2MP0CAP2 368 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 NBPF9Q3BBW0 867 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 MCMDC2Q4G0Z9 681 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 NOM1Q5C9Z4 860 aaKnown RBP7.39□□□□□ -1.23
NEDD9-202ENST00000379446 JAKMIP3Q5VZ66 844 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 CTU1Q7Z7A3 348 aaKnown RBP7.39□□□□□ -1.23
NEDD9-202ENST00000379446 YAF2Q8IY57 180 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 MYPNQ86TC9 1320 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 IRS2Q9Y4H2 1338 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 FER1L4A9Z1Z3 1794 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 BMP3P12645 472 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 RXRAP19793 462 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 GJB2P29033 226 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 POLA2Q14181 598 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 CCAR2Q8N163 923 aaKnown RBP7.39□□□□□ -1.23
NEDD9-202ENST00000379446 RGS22Q8NE09 1264 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 C8orf76Q96K31 380 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms