RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 PECAM1P16284 738 aaPredicted RBP12.16□□□□□ -0.46
USP6NL-202ENST00000379237 PPARAQ07869 468 aa12.16□□□□□ -0.46
USP6NL-202ENST00000379237 CWF19L2Q2TBE0 894 aaKnown RBP12.16□□□□□ -0.46
USP6NL-202ENST00000379237 SEPT14Q6ZU15 432 aa12.16□□□□□ -0.46
USP6NL-202ENST00000379237 PHKBQ93100 1093 aa12.16□□□□□ -0.46
USP6NL-202ENST00000379237 ZIM3Q96PE6 472 aa12.16□□□□□ -0.46
USP6NL-202ENST00000379237 PAPOLBQ9NRJ5 636 aaKnown RBP12.16□□□□□ -0.46
USP6NL-202ENST00000379237 E7EWF7 191 aa12.16□□□□□ -0.46
USP6NL-202ENST00000379237 ALDH1L1O75891 902 aa12.16□□□□□ -0.46
USP6NL-202ENST00000379237 TNNC1P63316 161 aa12.16□□□□□ -0.46
USP6NL-202ENST00000379237 CYP27A1Q02318 531 aa12.16□□□□□ -0.46
USP6NL-202ENST00000379237 FMR1Q06787 632 aaKnown RBP eCLIP12.16□□□□□ -0.461e-8■■■■■ 51.5
USP6NL-202ENST00000379237 RNF10Q8N5U6 811 aaKnown RBP12.16□□□□□ -0.46
USP6NL-202ENST00000379237 ZNF274Q96GC6 653 aaPredicted RBP12.16□□□□□ -0.46
USP6NL-202ENST00000379237 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.16□□□□□ -0.46
USP6NL-202ENST00000379237 ABHD10Q9NUJ1 306 aa12.16□□□□□ -0.46
USP6NL-202ENST00000379237 L3MBTL1Q9Y468 752 aa12.16□□□□□ -0.46
USP6NL-202ENST00000379237 PFDN1O60925 122 aa12.16□□□□□ -0.46
USP6NL-202ENST00000379237 GNAT1P11488 350 aa12.16□□□□□ -0.46
USP6NL-202ENST00000379237 TBC1D8BQ0IIM8 1120 aa12.16□□□□□ -0.46
USP6NL-202ENST00000379237 ANKRD13CQ8N6S4 541 aa12.16□□□□□ -0.46
USP6NL-202ENST00000379237 HYOU1Q9Y4L1 999 aa12.16□□□□□ -0.46
USP6NL-202ENST00000379237 CETN3O15182 167 aa12.15□□□□□ -0.46
USP6NL-202ENST00000379237 PAPOLAP51003 745 aaKnown RBP12.15□□□□□ -0.46
USP6NL-202ENST00000379237 FXR1P51114 621 aaKnown RBP eCLIP12.15□□□□□ -0.46
USP6NL-202ENST00000379237 RASIP1Q5U651 963 aa12.15□□□□□ -0.46
USP6NL-202ENST00000379237 USHBP1Q8N6Y0 703 aa12.15□□□□□ -0.46
USP6NL-202ENST00000379237 B4GALNT2Q8NHY0 566 aa12.15□□□□□ -0.46
USP6NL-202ENST00000379237 TLR7Q9NYK1 1049 aaKnown RBP12.15□□□□□ -0.46
USP6NL-202ENST00000379237 NOVA2Q9UNW9 492 aaKnown RBP12.15□□□□□ -0.46
USP6NL-202ENST00000379237 AATKQ6ZMQ8 1374 aa12.15□□□□□ -0.46
USP6NL-202ENST00000379237 SHROOM2Q13796 1616 aa12.15□□□□□ -0.46
USP6NL-202ENST00000379237 TCP1P17987 556 aaKnown RBP12.15□□□□□ -0.46
USP6NL-202ENST00000379237 IFIH1Q9BYX4 1025 aaKnown RBP12.15□□□□□ -0.46
USP6NL-202ENST00000379237 EME2A4GXA9 379 aaPredicted RBP12.15□□□□□ -0.46
USP6NL-202ENST00000379237 OPLAHO14841 1288 aa12.15□□□□□ -0.46
USP6NL-202ENST00000379237 ADD1P35611 737 aaKnown RBP12.15□□□□□ -0.46
USP6NL-202ENST00000379237 SCTRP47872 440 aa12.15□□□□□ -0.46
USP6NL-202ENST00000379237 CTCFP49711 727 aaPredicted RBP12.15□□□□□ -0.46
USP6NL-202ENST00000379237 ATP6V1G3Q96LB4 118 aa12.15□□□□□ -0.46
USP6NL-202ENST00000379237 GBP5Q96PP8 586 aa12.15□□□□□ -0.46
USP6NL-202ENST00000379237 TFR2Q9UP52 801 aa12.15□□□□□ -0.46
USP6NL-202ENST00000379237 PLAAQ9Y263 795 aa12.15□□□□□ -0.46
USP6NL-202ENST00000379237 ERCC5P28715 1186 aaPredicted RBP12.14□□□□□ -0.47
USP6NL-202ENST00000379237 KIF23Q02241 960 aaPredicted RBP12.14□□□□□ -0.47
USP6NL-202ENST00000379237 MUM1Q2TAK8 710 aa12.14□□□□□ -0.47
USP6NL-202ENST00000379237 NBPF10Q6P3W6 841 aaKnown RBP12.14□□□□□ -0.47
USP6NL-202ENST00000379237 ARMC9Q7Z3E5 817 aa12.14□□□□□ -0.47
USP6NL-202ENST00000379237 RNF168Q8IYW5 571 aaPredicted RBP12.14□□□□□ -0.47
USP6NL-202ENST00000379237 MIPOL1Q8TD10 442 aa12.14□□□□□ -0.47
USP6NL-202ENST00000379237 ITFG2Q969R8 447 aa12.14□□□□□ -0.47
USP6NL-202ENST00000379237 SEC16BQ96JE7 1060 aa12.14□□□□□ -0.47
USP6NL-202ENST00000379237 CD2APQ9Y5K6 639 aa12.14□□□□□ -0.47
USP6NL-202ENST00000379237 YTHDC2Q9H6S0 1430 aaKnown RBP12.14□□□□□ -0.47
USP6NL-202ENST00000379237 MADDQ8WXG6 1647 aa12.14□□□□□ -0.47
USP6NL-202ENST00000379237 DISP1Q96F81 1524 aa12.14□□□□□ -0.47
USP6NL-202ENST00000379237 RASSF10A6NK89 507 aa12.14□□□□□ -0.47
USP6NL-202ENST00000379237 CREB3O43889 395 aa12.14□□□□□ -0.47
USP6NL-202ENST00000379237 IFIT1P09914 478 aaKnown RBP12.14□□□□□ -0.47
USP6NL-202ENST00000379237 IFNAR2P48551 515 aa12.14□□□□□ -0.47
USP6NL-202ENST00000379237 CUL3Q13618 768 aa12.14□□□□□ -0.47
USP6NL-202ENST00000379237 CEP128Q6ZU80 1094 aa12.14□□□□□ -0.47
USP6NL-202ENST00000379237 BIN2Q9UBW5 565 aaPredicted RBP12.14□□□□□ -0.47
USP6NL-202ENST00000379237 COL9A3Q14050 684 aaPredicted RBP12.14□□□□□ -0.47
USP6NL-202ENST00000379237 METTL16Q86W50 562 aaKnown RBP12.14□□□□□ -0.47
USP6NL-202ENST00000379237 TRIML1Q8N9V2 468 aa12.14□□□□□ -0.47
USP6NL-202ENST00000379237 CHP1Q99653 195 aa12.14□□□□□ -0.47
USP6NL-202ENST00000379237 TUBE1Q9UJT0 475 aa12.14□□□□□ -0.47
USP6NL-202ENST00000379237 KCNJ18B7U540 433 aa12.14□□□□□ -0.47
USP6NL-202ENST00000379237 SHOX2O60902 331 aaPredicted RBP12.14□□□□□ -0.47
USP6NL-202ENST00000379237 KCNJ12Q14500 433 aa12.14□□□□□ -0.47
USP6NL-202ENST00000379237 ACCSLQ4AC99 568 aa12.14□□□□□ -0.47
USP6NL-202ENST00000379237 WDR66Q8TBY9 1149 aa12.14□□□□□ -0.47
USP6NL-202ENST00000379237 KRT12Q99456 494 aa12.14□□□□□ -0.47
USP6NL-202ENST00000379237 TRIM7Q9C029 511 aa12.14□□□□□ -0.47
USP6NL-202ENST00000379237 MMRN2Q9H8L6 949 aa12.14□□□□□ -0.47
USP6NL-202ENST00000379237 SNRKQ9NRH2 765 aa12.14□□□□□ -0.47
USP6NL-202ENST00000379237 USH1CQ9Y6N9 552 aa12.14□□□□□ -0.47
USP6NL-202ENST00000379237 COPB1P53618 953 aaKnown RBP12.13□□□□□ -0.47
USP6NL-202ENST00000379237 SESN3P58005 492 aa12.13□□□□□ -0.47
USP6NL-202ENST00000379237 TRIM31Q9BZY9 425 aa12.13□□□□□ -0.47
USP6NL-202ENST00000379237 HOMER3Q9NSC5 361 aa12.13□□□□□ -0.47
USP6NL-202ENST00000379237 ABCF2Q9UG63 623 aa12.13□□□□□ -0.47
USP6NL-202ENST00000379237 SLC12A7Q9Y666 1083 aa12.13□□□□□ -0.47
USP6NL-202ENST00000379237 LRRC7Q96NW7 1537 aa12.13□□□□□ -0.47
USP6NL-202ENST00000379237 ADGRL3Q9HAR2 1447 aa12.13□□□□□ -0.47
USP6NL-202ENST00000379237 PHF20L1A8MW92 1017 aa12.13□□□□□ -0.47
USP6NL-202ENST00000379237 ZBTB43O43298 467 aa12.13□□□□□ -0.47
USP6NL-202ENST00000379237 ATP6V1G2O95670 118 aa12.13□□□□□ -0.47
USP6NL-202ENST00000379237 TMOD1P28289 359 aa12.13□□□□□ -0.47
USP6NL-202ENST00000379237 EPS15P42566 896 aa12.13□□□□□ -0.47
USP6NL-202ENST00000379237 PAK1Q13153 545 aa12.13□□□□□ -0.47
USP6NL-202ENST00000379237 NR1I3Q14994 352 aa12.13□□□□□ -0.47
USP6NL-202ENST00000379237 TMEM139Q8IV31 216 aa12.13□□□□□ -0.47
USP6NL-202ENST00000379237 C3orf20Q8ND61 904 aa12.13□□□□□ -0.47
USP6NL-202ENST00000379237 GPHNQ9NQX3 736 aaPredicted RBP12.13□□□□□ -0.47
USP6NL-202ENST00000379237 MAGEA1P43355 309 aa12.13□□□□□ -0.47
USP6NL-202ENST00000379237 TYW1BQ6NUM6 668 aa12.13□□□□□ -0.47
USP6NL-202ENST00000379237 SHC4Q6S5L8 630 aa12.13□□□□□ -0.47
USP6NL-202ENST00000379237 AIFM3Q96NN9 605 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms