RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 ZNF287Q9HBT7 754 aa29.48■■■□□ 2.31
TNFRSF4-201ENST00000379236 GJD2Q9UKL4 321 aa29.48■■■□□ 2.31
TNFRSF4-201ENST00000379236 TMX2Q9Y320 296 aa29.48■■■□□ 2.31
TNFRSF4-201ENST00000379236 COG2Q14746 738 aa29.47■■■□□ 2.31
TNFRSF4-201ENST00000379236 LBX2Q6XYB7 198 aa29.47■■■□□ 2.31
TNFRSF4-201ENST00000379236 U2AF1L4Q8WU68 220 aaKnown RBP29.47■■■□□ 2.31
TNFRSF4-201ENST00000379236 PORCNQ9H237 461 aa29.47■■■□□ 2.31
TNFRSF4-201ENST00000379236 HOXC10Q9NYD6 342 aa29.47■■■□□ 2.31
TNFRSF4-201ENST00000379236 PARP14Q460N5 1801 aa29.47■■■□□ 2.31
TNFRSF4-201ENST00000379236 GREB1LQ9C091 1923 aaPredicted RBP29.47■■■□□ 2.31
TNFRSF4-201ENST00000379236 SALL3Q9BXA9 1300 aa29.46■■■□□ 2.31
TNFRSF4-201ENST00000379236 SPDYE16A6NNV3 312 aaPredicted RBP29.46■■■□□ 2.31
TNFRSF4-201ENST00000379236 PATL2C9JE40 543 aaKnown RBP29.46■■■□□ 2.31
TNFRSF4-201ENST00000379236 RAD21O60216 631 aa29.46■■■□□ 2.31
TNFRSF4-201ENST00000379236 SHISA4Q96DD7 197 aa29.46■■■□□ 2.31
TNFRSF4-201ENST00000379236 VCPKMTQ9H867 229 aa29.46■■■□□ 2.31
TNFRSF4-201ENST00000379236 ROBO3Q96MS0 1386 aa29.45■■■□□ 2.31
TNFRSF4-201ENST00000379236 RGS2P41220 211 aa29.45■■■□□ 2.31
TNFRSF4-201ENST00000379236 TRMT44Q8IYL2 757 aaKnown RBP29.45■■■□□ 2.31
TNFRSF4-201ENST00000379236 SPICE1Q8N0Z3 855 aa29.45■■■□□ 2.31
TNFRSF4-201ENST00000379236 EVI5LQ96CN4 794 aa29.45■■■□□ 2.31
TNFRSF4-201ENST00000379236 SEC62Q99442 399 aaKnown RBP29.45■■■□□ 2.31
TNFRSF4-201ENST00000379236 GOPCQ9HD26 462 aa29.45■■■□□ 2.31
TNFRSF4-201ENST00000379236 IVNS1ABPQ9Y6Y0 642 aa29.45■■■□□ 2.31
TNFRSF4-201ENST00000379236 RLFQ13129 1914 aa29.45■■■□□ 2.3
TNFRSF4-201ENST00000379236 A0A0G2JMZ2 1700 aa29.45■■■□□ 2.3
TNFRSF4-201ENST00000379236 CNMDO75829 334 aa29.44■■■□□ 2.3
TNFRSF4-201ENST00000379236 SGPL1O95470 568 aa29.44■■■□□ 2.3
TNFRSF4-201ENST00000379236 EEF2P13639 858 aaKnown RBP29.44■■■□□ 2.3
TNFRSF4-201ENST00000379236 ZMYM1Q5SVZ6 1142 aa29.44■■■□□ 2.3
TNFRSF4-201ENST00000379236 SAMD1Q6SPF0 538 aaPredicted RBP29.44■■■□□ 2.3
TNFRSF4-201ENST00000379236 IFNL3Q8IZI9 196 aa29.44■■■□□ 2.3
TNFRSF4-201ENST00000379236 DEFB118Q96PH6 123 aa29.44■■■□□ 2.3
TNFRSF4-201ENST00000379236 NAPBQ9H115 298 aa29.44■■■□□ 2.3
TNFRSF4-201ENST00000379236 EPB41L4AQ9HCS5 686 aaPredicted RBP29.44■■■□□ 2.3
TNFRSF4-201ENST00000379236 COL11A1P12107 1806 aaPredicted RBP29.43■■■□□ 2.3
TNFRSF4-201ENST00000379236 WDR46O15213 610 aaKnown RBP29.43■■■□□ 2.3
TNFRSF4-201ENST00000379236 FLOT1O75955 427 aa29.43■■■□□ 2.3
TNFRSF4-201ENST00000379236 TFRCP02786 760 aaKnown RBP29.43■■■□□ 2.3
TNFRSF4-201ENST00000379236 SLC3A2P08195 630 aaKnown RBP29.43■■■□□ 2.3
TNFRSF4-201ENST00000379236 ZKSCAN1P17029 563 aaPredicted RBP29.43■■■□□ 2.3
TNFRSF4-201ENST00000379236 PDE1AP54750 535 aa29.43■■■□□ 2.3
TNFRSF4-201ENST00000379236 B4GALNT3Q6L9W6 998 aa29.43■■■□□ 2.3
TNFRSF4-201ENST00000379236 ZNF444Q8N0Y2 327 aaPredicted RBP29.43■■■□□ 2.3
TNFRSF4-201ENST00000379236 LNPKQ9C0E8 428 aa29.43■■■□□ 2.3
TNFRSF4-201ENST00000379236 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.43■■■□□ 2.3
TNFRSF4-201ENST00000379236 STAP2Q9UGK3 403 aa29.43■■■□□ 2.3
TNFRSF4-201ENST00000379236 XRCC5P13010 732 aaKnown RBP29.42■■■□□ 2.3
TNFRSF4-201ENST00000379236 CAPN2P17655 700 aa29.42■■■□□ 2.3
TNFRSF4-201ENST00000379236 POTEEQ6S8J3 1075 aa29.42■■■□□ 2.3
TNFRSF4-201ENST00000379236 EXOC6Q8TAG9 804 aa29.42■■■□□ 2.3
TNFRSF4-201ENST00000379236 TRIB2Q92519 343 aa29.42■■■□□ 2.3
TNFRSF4-201ENST00000379236 HMX1Q9NP08 348 aaPredicted RBP29.42■■■□□ 2.3
TNFRSF4-201ENST00000379236 BTBD7Q9P203 1132 aa29.42■■■□□ 2.3
TNFRSF4-201ENST00000379236 RASA1P20936 1047 aa29.41■■■□□ 2.3
TNFRSF4-201ENST00000379236 SIAH1Q8IUQ4 282 aa29.41■■■□□ 2.3
TNFRSF4-201ENST00000379236 APBA2Q99767 749 aa29.41■■■□□ 2.3
TNFRSF4-201ENST00000379236 FARP2O94887 1054 aaPredicted RBP29.4■■■□□ 2.3
TNFRSF4-201ENST00000379236 PDE4BQ07343 736 aa29.4■■■□□ 2.3
TNFRSF4-201ENST00000379236 PLS1Q14651 629 aa29.4■■■□□ 2.3
TNFRSF4-201ENST00000379236 KIAA1755Q5JYT7 1200 aa29.4■■■□□ 2.3
TNFRSF4-201ENST00000379236 MB21D1Q8N884 522 aa29.4■■■□□ 2.3
TNFRSF4-201ENST00000379236 PAK6Q9NQU5 681 aaPredicted RBP29.4■■■□□ 2.3
TNFRSF4-201ENST00000379236 RPTORQ8N122 1335 aa29.4■■■□□ 2.3
TNFRSF4-201ENST00000379236 TRIM6-TRIM34B2RNG4 842 aa29.39■■■□□ 2.3
TNFRSF4-201ENST00000379236 DSG3P32926 999 aa29.39■■■□□ 2.3
TNFRSF4-201ENST00000379236 MAP2K5Q13163 448 aa29.39■■■□□ 2.3
TNFRSF4-201ENST00000379236 MORN1Q5T089 497 aa29.39■■■□□ 2.3
TNFRSF4-201ENST00000379236 HTATIP2Q9BUP3 242 aa29.39■■■□□ 2.3
TNFRSF4-201ENST00000379236 TRIM32Q13049 653 aa29.38■■■□□ 2.29
TNFRSF4-201ENST00000379236 SMC5Q8IY18 1101 aa29.38■■■□□ 2.29
TNFRSF4-201ENST00000379236 SUPT16HQ9Y5B9 1047 aaKnown RBP29.38■■■□□ 2.29
TNFRSF4-201ENST00000379236 SLC15A5A6NIM6 579 aa29.37■■■□□ 2.29
TNFRSF4-201ENST00000379236 PRDM1O75626 825 aa29.37■■■□□ 2.29
TNFRSF4-201ENST00000379236 PTPREP23469 700 aa29.37■■■□□ 2.29
TNFRSF4-201ENST00000379236 CCDC129Q6ZRS4 1044 aa29.37■■■□□ 2.29
TNFRSF4-201ENST00000379236 DPF3Q92784 378 aa29.37■■■□□ 2.29
TNFRSF4-201ENST00000379236 SPATC1LQ9H0A9 340 aa29.37■■■□□ 2.29
TNFRSF4-201ENST00000379236 PRKAR2AP13861 404 aaKnown RBP29.36■■■□□ 2.29
TNFRSF4-201ENST00000379236 PPARAQ07869 468 aa29.36■■■□□ 2.29
TNFRSF4-201ENST00000379236 USP6NLQ92738 828 aa29.36■■■□□ 2.29
TNFRSF4-201ENST00000379236 ATG4CQ96DT6 458 aa29.36■■■□□ 2.29
TNFRSF4-201ENST00000379236 ZNF236Q9UL36 1845 aa29.36■■■□□ 2.29
TNFRSF4-201ENST00000379236 TSPY3P0CV98 308 aa29.35■■■□□ 2.29
TNFRSF4-201ENST00000379236 TSPY8P0CW00 308 aa29.35■■■□□ 2.29
TNFRSF4-201ENST00000379236 CHD1LQ86WJ1 897 aa29.35■■■□□ 2.29
TNFRSF4-201ENST00000379236 RILPL2Q969X0 211 aa29.35■■■□□ 2.29
TNFRSF4-201ENST00000379236 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.35■■■□□ 2.29
TNFRSF4-201ENST00000379236 MOV10L1Q9BXT6 1211 aaKnown RBP29.35■■■□□ 2.29
TNFRSF4-201ENST00000379236 HELLSQ9NRZ9 838 aa29.35■■■□□ 2.29
TNFRSF4-201ENST00000379236 NYAP2Q9P242 653 aa29.35■■■□□ 2.29
TNFRSF4-201ENST00000379236 ZNFX1Q9P2E3 1918 aaKnown RBP29.35■■■□□ 2.29
TNFRSF4-201ENST00000379236 FAM83BQ5T0W9 1011 aa29.34■■■□□ 2.29
TNFRSF4-201ENST00000379236 SHCBP1Q8NEM2 672 aa29.34■■■□□ 2.29
TNFRSF4-201ENST00000379236 CLIP2Q9UDT6 1046 aa29.34■■■□□ 2.29
TNFRSF4-201ENST00000379236 GRB14Q14449 540 aa29.33■■■□□ 2.29
TNFRSF4-201ENST00000379236 CCL14Q16627 93 aa29.33■■■□□ 2.29
TNFRSF4-201ENST00000379236 MFSD14CQ5VZR4 134 aa29.33■■■□□ 2.29
TNFRSF4-201ENST00000379236 DPP9Q86TI2 863 aa29.33■■■□□ 2.29
TNFRSF4-201ENST00000379236 NCAPG2Q86XI2 1143 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms