RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 SLC35G1Q2M3R5 365 aa17.73■□□□□ 0.43
RAB3IP-204ENST00000378815 SOGA3Q5TF21 947 aa17.73■□□□□ 0.43
RAB3IP-204ENST00000378815 FMR1NBQ8N0W7 255 aaPredicted RBP17.73■□□□□ 0.43
RAB3IP-204ENST00000378815 JMYQ8N9B5 988 aa17.73■□□□□ 0.43
RAB3IP-204ENST00000378815 LZTS2Q9BRK4 669 aa17.73■□□□□ 0.43
RAB3IP-204ENST00000378815 DHX36Q9H2U1 1008 aaKnown RBP17.73■□□□□ 0.43
RAB3IP-204ENST00000378815 ZNF277Q9NRM2 450 aaPredicted RBP17.73■□□□□ 0.43
RAB3IP-204ENST00000378815 MARCKSP29966 332 aaPredicted RBP17.73■□□□□ 0.43
RAB3IP-204ENST00000378815 LARGE2Q8N3Y3 721 aa17.73■□□□□ 0.43
RAB3IP-204ENST00000378815 PIM2Q9P1W9 311 aa17.73■□□□□ 0.43
RAB3IP-204ENST00000378815 COL4A5P29400 1685 aa17.72■□□□□ 0.43
RAB3IP-204ENST00000378815 VEGFAP15692 232 aaPredicted RBP17.72■□□□□ 0.43
RAB3IP-204ENST00000378815 CMA1P23946 247 aa17.72■□□□□ 0.43
RAB3IP-204ENST00000378815 RSBN1LQ6PCB5 846 aaPredicted RBP17.72■□□□□ 0.43
RAB3IP-204ENST00000378815 CKAP2LQ8IYA6 745 aa17.72■□□□□ 0.43
RAB3IP-204ENST00000378815 ANP32BQ92688 251 aaKnown RBP17.72■□□□□ 0.43
RAB3IP-204ENST00000378815 TNFRSF25Q93038 417 aa17.72■□□□□ 0.43
RAB3IP-204ENST00000378815 ATF5Q9Y2D1 282 aaPredicted RBP17.72■□□□□ 0.43
RAB3IP-204ENST00000378815 PSME4Q14997 1843 aa17.72■□□□□ 0.43
RAB3IP-204ENST00000378815 CTAGE5O15320 804 aa17.72■□□□□ 0.43
RAB3IP-204ENST00000378815 CYTH3O43739 400 aa17.72■□□□□ 0.43
RAB3IP-204ENST00000378815 KINO60870 393 aaKnown RBP17.72■□□□□ 0.43
RAB3IP-204ENST00000378815 VIL1P09327 827 aaKnown RBP17.72■□□□□ 0.43
RAB3IP-204ENST00000378815 POLD1P28340 1107 aa17.72■□□□□ 0.43
RAB3IP-204ENST00000378815 CFAP100Q494V2 611 aa17.72■□□□□ 0.43
RAB3IP-204ENST00000378815 BRMS1Q9HCU9 246 aa17.72■□□□□ 0.43
RAB3IP-204ENST00000378815 CABP5Q9NP86 173 aa17.72■□□□□ 0.43
RAB3IP-204ENST00000378815 A0A1B0GVL5 298 aa17.71■□□□□ 0.43
RAB3IP-204ENST00000378815 NDUFA8P51970 172 aa17.71■□□□□ 0.43
RAB3IP-204ENST00000378815 TCP10Q12799 353 aa17.71■□□□□ 0.43
RAB3IP-204ENST00000378815 PPP1R9BQ96SB3 815 aa17.71■□□□□ 0.43
RAB3IP-204ENST00000378815 GMLQ99445 158 aa17.71■□□□□ 0.43
RAB3IP-204ENST00000378815 SH3GLB2Q9NR46 395 aa17.71■□□□□ 0.43
RAB3IP-204ENST00000378815 DDTLA6NHG4 134 aaPredicted RBP17.71■□□□□ 0.42
RAB3IP-204ENST00000378815 KLRF2D3W0D1 207 aa17.71■□□□□ 0.42
RAB3IP-204ENST00000378815 PARP1P09874 1014 aaKnown RBP17.71■□□□□ 0.42
RAB3IP-204ENST00000378815 TYRO3Q06418 890 aa17.71■□□□□ 0.42
RAB3IP-204ENST00000378815 CCDC173Q0VFZ6 552 aa17.71■□□□□ 0.42
RAB3IP-204ENST00000378815 SH3BP5LQ7L8J4 393 aa17.71■□□□□ 0.42
RAB3IP-204ENST00000378815 PIBF1Q8WXW3 757 aa17.71■□□□□ 0.42
RAB3IP-204ENST00000378815 SPZ1Q9BXG8 430 aa17.71■□□□□ 0.42
RAB3IP-204ENST00000378815 DNAJC18Q9H819 358 aa17.71■□□□□ 0.42
RAB3IP-204ENST00000378815 PSMD14O00487 310 aa17.7■□□□□ 0.42
RAB3IP-204ENST00000378815 RASGRP2Q7LDG7 609 aa17.7■□□□□ 0.42
RAB3IP-204ENST00000378815 PRMT6Q96LA8 375 aaPredicted RBP17.7■□□□□ 0.42
RAB3IP-204ENST00000378815 PI4KBQ9UBF8 816 aa17.7■□□□□ 0.42
RAB3IP-204ENST00000378815 MTMR7Q9Y216 660 aa17.7■□□□□ 0.42
RAB3IP-204ENST00000378815 RAD17O75943 681 aa17.69■□□□□ 0.42
RAB3IP-204ENST00000378815 GOLGA8HP0CJ92 632 aa17.69■□□□□ 0.42
RAB3IP-204ENST00000378815 SMARCA1P28370 1054 aa17.69■□□□□ 0.42
RAB3IP-204ENST00000378815 UVSSAQ2YD98 709 aa17.69■□□□□ 0.42
RAB3IP-204ENST00000378815 EARS2Q5JPH6 523 aaKnown RBP17.69■□□□□ 0.42
RAB3IP-204ENST00000378815 CCDC17Q96LX7 622 aa17.69■□□□□ 0.42
RAB3IP-204ENST00000378815 TDRD3Q9H7E2 651 aaKnown RBP17.69■□□□□ 0.42
RAB3IP-204ENST00000378815 PCDHB6Q9Y5E3 794 aa17.69■□□□□ 0.42
RAB3IP-204ENST00000378815 FAM237AA0A1B0GTK4 181 aa17.69■□□□□ 0.42
RAB3IP-204ENST00000378815 FAM205CA6NFA0 338 aa17.69■□□□□ 0.42
RAB3IP-204ENST00000378815 CUTAO60888 179 aa17.69■□□□□ 0.42
RAB3IP-204ENST00000378815 ENTPD3O75355 529 aa17.69■□□□□ 0.42
RAB3IP-204ENST00000378815 TTLL1O95922 423 aa17.69■□□□□ 0.42
RAB3IP-204ENST00000378815 NLRP5P59047 1200 aa17.69■□□□□ 0.42
RAB3IP-204ENST00000378815 USP17L2Q6R6M4 530 aa17.69■□□□□ 0.42
RAB3IP-204ENST00000378815 MRVI1Q9Y6F6 885 aa17.69■□□□□ 0.42
RAB3IP-204ENST00000378815 MORC2Q9Y6X9 1032 aaPredicted RBP17.69■□□□□ 0.42
RAB3IP-204ENST00000378815 GOLGB1Q14789 3259 aaKnown RBP17.69■□□□□ 0.42
RAB3IP-204ENST00000378815 SIPA1L1O43166 1804 aa17.68■□□□□ 0.42
RAB3IP-204ENST00000378815 PFKFB1P16118 471 aa17.68■□□□□ 0.42
RAB3IP-204ENST00000378815 DALRD3Q5D0E6 543 aaKnown RBP17.68■□□□□ 0.42
RAB3IP-204ENST00000378815 SHC4Q6S5L8 630 aa17.68■□□□□ 0.42
RAB3IP-204ENST00000378815 METTL16Q86W50 562 aaKnown RBP17.68■□□□□ 0.42
RAB3IP-204ENST00000378815 ZNRF3Q9ULT6 936 aa17.68■□□□□ 0.42
RAB3IP-204ENST00000378815 ATRNL1Q5VV63 1379 aa17.68■□□□□ 0.42
RAB3IP-204ENST00000378815 SNHG28P0DPA3 235 aa17.68■□□□□ 0.42
RAB3IP-204ENST00000378815 PDHBP11177 359 aa17.68■□□□□ 0.42
RAB3IP-204ENST00000378815 CALML3P27482 149 aa17.68■□□□□ 0.42
RAB3IP-204ENST00000378815 KRI1Q8N9T8 703 aaKnown RBP17.68■□□□□ 0.42
RAB3IP-204ENST00000378815 CEP131Q9UPN4 1083 aa17.68■□□□□ 0.42
RAB3IP-204ENST00000378815 HPSEQ9Y251 543 aa17.68■□□□□ 0.42
RAB3IP-204ENST00000378815 COL2A1P02458 1487 aaPredicted RBP17.68■□□□□ 0.42
RAB3IP-204ENST00000378815 GREB1LQ9C091 1923 aaPredicted RBP17.68■□□□□ 0.42
RAB3IP-204ENST00000378815 SPDYE2BA6NHP3 402 aa17.67■□□□□ 0.42
RAB3IP-204ENST00000378815 USP17L5A8MUK1 530 aa17.67■□□□□ 0.42
RAB3IP-204ENST00000378815 SPDYE6P0CI01 402 aa17.67■□□□□ 0.42
RAB3IP-204ENST00000378815 SLURP2P0DP57 97 aa17.67■□□□□ 0.42
RAB3IP-204ENST00000378815 RESP18Q5W5W9 173 aa17.67■□□□□ 0.42
RAB3IP-204ENST00000378815 CLEC10AQ8IUN9 316 aa17.67■□□□□ 0.42
RAB3IP-204ENST00000378815 FOXP4Q8IVH2 680 aaPredicted RBP17.67■□□□□ 0.42
RAB3IP-204ENST00000378815 FAM177A1Q8N128 213 aaPredicted RBP17.67■□□□□ 0.42
RAB3IP-204ENST00000378815 GPKOWQ92917 476 aaPredicted RBP eCLIP17.67■□□□□ 0.42
RAB3IP-204ENST00000378815 PDLIM2Q96JY6 352 aa17.67■□□□□ 0.42
RAB3IP-204ENST00000378815 CLIC6Q96NY7 704 aa17.67■□□□□ 0.42
RAB3IP-204ENST00000378815 CLIP2Q9UDT6 1046 aa17.67■□□□□ 0.42
RAB3IP-204ENST00000378815 BAZ2BQ9UIF8 2168 aaKnown RBP17.67■□□□□ 0.42
RAB3IP-204ENST00000378815 PTPREP23469 700 aa17.67■□□□□ 0.42
RAB3IP-204ENST00000378815 WWC2Q6AWC2 1192 aa17.67■□□□□ 0.42
RAB3IP-204ENST00000378815 TYW1BQ6NUM6 668 aa17.67■□□□□ 0.42
RAB3IP-204ENST00000378815 SASS6Q6UVJ0 657 aa17.67■□□□□ 0.42
RAB3IP-204ENST00000378815 ZSCAN29Q8IWY8 852 aaPredicted RBP17.67■□□□□ 0.42
RAB3IP-204ENST00000378815 NIM1KQ8IY84 436 aa17.67■□□□□ 0.42
RAB3IP-204ENST00000378815 LRRC47Q8N1G4 583 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms