RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 RESTQ13127 1097 aa16.09■□□□□ 0.17
PRDM16-203ENST00000378391 PRPF31Q8WWY3 499 aaKnown RBP16.09■□□□□ 0.17
PRDM16-203ENST00000378391 PPP1R12CQ9BZL4 782 aa16.09■□□□□ 0.17
PRDM16-203ENST00000378391 PCDHA7Q9UN72 937 aa16.09■□□□□ 0.17
PRDM16-203ENST00000378391 IGSF1Q8N6C5 1336 aa16.09■□□□□ 0.17
PRDM16-203ENST00000378391 TERF2Q15554 542 aa16.09■□□□□ 0.17
PRDM16-203ENST00000378391 CFAP221Q4G0U5 840 aa16.09■□□□□ 0.17
PRDM16-203ENST00000378391 ARMCX6Q7L4S7 300 aa16.09■□□□□ 0.17
PRDM16-203ENST00000378391 SEPT8Q92599 483 aa16.09■□□□□ 0.17
PRDM16-203ENST00000378391 PRR36Q9H6K5 1346 aa16.08■□□□□ 0.17
PRDM16-203ENST00000378391 SPOPO43791 374 aa16.08■□□□□ 0.17
PRDM16-203ENST00000378391 CEP104O60308 925 aa16.08■□□□□ 0.17
PRDM16-203ENST00000378391 GCKRQ14397 625 aa16.08■□□□□ 0.17
PRDM16-203ENST00000378391 ASIC2Q16515 512 aa16.08■□□□□ 0.17
PRDM16-203ENST00000378391 FAM89AQ96GI7 184 aa16.08■□□□□ 0.17
PRDM16-203ENST00000378391 CABS1Q96KC9 395 aa16.08■□□□□ 0.17
PRDM16-203ENST00000378391 SLF1Q9BQI6 1058 aa16.08■□□□□ 0.17
PRDM16-203ENST00000378391 F8W031 263 aaPredicted RBP16.08■□□□□ 0.16
PRDM16-203ENST00000378391 LRRC23Q53EV4 343 aaPredicted RBP16.08■□□□□ 0.16
PRDM16-203ENST00000378391 PGBD1Q96JS3 809 aa16.08■□□□□ 0.16
PRDM16-203ENST00000378391 GLT8D2Q9H1C3 349 aa16.08■□□□□ 0.16
PRDM16-203ENST00000378391 ITGA6P23229 1130 aa16.08■□□□□ 0.16
PRDM16-203ENST00000378391 HAUS3Q68CZ6 603 aa16.08■□□□□ 0.16
PRDM16-203ENST00000378391 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.08■□□□□ 0.16
PRDM16-203ENST00000378391 TXNDC16Q9P2K2 825 aa16.08■□□□□ 0.16
PRDM16-203ENST00000378391 ADCY9O60503 1353 aa16.08■□□□□ 0.16
PRDM16-203ENST00000378391 ALKQ9UM73 1620 aa16.08■□□□□ 0.16
PRDM16-203ENST00000378391 PSDA5PKW4 1024 aaPredicted RBP16.08■□□□□ 0.16
PRDM16-203ENST00000378391 USP27XA6NNY8 438 aa16.08■□□□□ 0.16
PRDM16-203ENST00000378391 E7EWF7 191 aa16.08■□□□□ 0.16
PRDM16-203ENST00000378391 NDUFA8P51970 172 aa16.08■□□□□ 0.16
PRDM16-203ENST00000378391 VCXQ9H320 206 aa16.08■□□□□ 0.16
PRDM16-203ENST00000378391 ARMT1Q9H993 441 aa16.08■□□□□ 0.16
PRDM16-203ENST00000378391 FCHSD1Q86WN1 690 aa16.07■□□□□ 0.16
PRDM16-203ENST00000378391 CCDC110Q8TBZ0 833 aa16.07■□□□□ 0.16
PRDM16-203ENST00000378391 ATP11AP98196 1134 aa16.07■□□□□ 0.16
PRDM16-203ENST00000378391 SND1Q7KZF4 910 aaKnown RBP eCLIP16.07■□□□□ 0.16
PRDM16-203ENST00000378391 KIFAP3Q92845 792 aa16.07■□□□□ 0.16
PRDM16-203ENST00000378391 PHKBQ93100 1093 aa16.07■□□□□ 0.16
PRDM16-203ENST00000378391 ZC3H12CQ9C0D7 883 aaKnown RBP16.07■□□□□ 0.16
PRDM16-203ENST00000378391 EFCAB8A8MWE9 144 aa16.07■□□□□ 0.16
PRDM16-203ENST00000378391 ZWINTO95229 277 aa16.07■□□□□ 0.16
PRDM16-203ENST00000378391 BIRC2Q13490 618 aa16.07■□□□□ 0.16
PRDM16-203ENST00000378391 CLUL1Q15846 466 aa16.07■□□□□ 0.16
PRDM16-203ENST00000378391 ZSCAN26Q16670 478 aa16.07■□□□□ 0.16
PRDM16-203ENST00000378391 UBL4BQ8N7F7 174 aa16.07■□□□□ 0.16
PRDM16-203ENST00000378391 INF2Q27J81 1249 aa16.07■□□□□ 0.16
PRDM16-203ENST00000378391 SAR1BQ9Y6B6 198 aa16.07■□□□□ 0.16
PRDM16-203ENST00000378391 SARM1Q6SZW1 724 aa16.06■□□□□ 0.16
PRDM16-203ENST00000378391 CTIFO43310 598 aaKnown RBP16.06■□□□□ 0.16
PRDM16-203ENST00000378391 MTMR3Q13615 1198 aa16.06■□□□□ 0.16
PRDM16-203ENST00000378391 KMT5BQ4FZB7 885 aa16.06■□□□□ 0.16
PRDM16-203ENST00000378391 NEXMIFQ5QGS0 1516 aa16.06■□□□□ 0.16
PRDM16-203ENST00000378391 OGFOD1Q8N543 542 aa16.06■□□□□ 0.16
PRDM16-203ENST00000378391 MICAL1Q8TDZ2 1067 aa16.06■□□□□ 0.16
PRDM16-203ENST00000378391 STMN2Q93045 179 aa16.06■□□□□ 0.16
PRDM16-203ENST00000378391 PCDH11XQ9BZA7 1347 aa16.06■□□□□ 0.16
PRDM16-203ENST00000378391 PCDH11YQ9BZA8 1340 aa16.06■□□□□ 0.16
PRDM16-203ENST00000378391 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.06■□□□□ 0.16
PRDM16-203ENST00000378391 RBM6P78332 1123 aaKnown RBP16.06■□□□□ 0.16
PRDM16-203ENST00000378391 KRT25Q7Z3Z0 450 aa16.06■□□□□ 0.16
PRDM16-203ENST00000378391 SH3TC1Q8TE82 1336 aa16.06■□□□□ 0.16
PRDM16-203ENST00000378391 OR8K1Q8NGG5 319 aa16.06■□□□□ 0.16
PRDM16-203ENST00000378391 NELFBQ8WX92 580 aa16.06■□□□□ 0.16
PRDM16-203ENST00000378391 DEPDC5O75140 1603 aa16.06■□□□□ 0.16
PRDM16-203ENST00000378391 PFKFB1P16118 471 aa16.05■□□□□ 0.16
PRDM16-203ENST00000378391 TOB2Q14106 344 aaPredicted RBP16.05■□□□□ 0.16
PRDM16-203ENST00000378391 TEX2Q8IWB9 1127 aa16.05■□□□□ 0.16
PRDM16-203ENST00000378391 NEO1Q92859 1461 aa16.05■□□□□ 0.16
PRDM16-203ENST00000378391 GMNNO75496 209 aa16.05■□□□□ 0.16
PRDM16-203ENST00000378391 ERCC5P28715 1186 aaPredicted RBP16.05■□□□□ 0.16
PRDM16-203ENST00000378391 NONOQ15233 471 aaKnown RBP eCLIP16.05■□□□□ 0.16
PRDM16-203ENST00000378391 DPCR1Q3MIW9 517 aa16.05■□□□□ 0.16
PRDM16-203ENST00000378391 PARP10Q53GL7 1025 aa16.05■□□□□ 0.16
PRDM16-203ENST00000378391 TAOK1Q7L7X3 1001 aa16.05■□□□□ 0.16
PRDM16-203ENST00000378391 RCOR1Q9UKL0 485 aa16.05■□□□□ 0.16
PRDM16-203ENST00000378391 MORC2Q9Y6X9 1032 aaPredicted RBP16.05■□□□□ 0.16
PRDM16-203ENST00000378391 RNASE9P60153 205 aaKnown RBP16.05■□□□□ 0.16
PRDM16-203ENST00000378391 LRWD1Q9UFC0 647 aa16.05■□□□□ 0.16
PRDM16-203ENST00000378391 CALUO43852 315 aaPredicted RBP16.05■□□□□ 0.16
PRDM16-203ENST00000378391 FLOT1O75955 427 aa16.05■□□□□ 0.16
PRDM16-203ENST00000378391 STMN1P16949 149 aa16.05■□□□□ 0.16
PRDM16-203ENST00000378391 CMA1P23946 247 aa16.05■□□□□ 0.16
PRDM16-203ENST00000378391 TXKP42681 527 aa16.05■□□□□ 0.16
PRDM16-203ENST00000378391 TRMT44Q8IYL2 757 aaKnown RBP16.05■□□□□ 0.16
PRDM16-203ENST00000378391 IRAK4Q9NWZ3 460 aa16.05■□□□□ 0.16
PRDM16-203ENST00000378391 CCNT1O60563 726 aaKnown RBP16.05■□□□□ 0.16
PRDM16-203ENST00000378391 BUB1BO60566 1050 aaPredicted RBP16.05■□□□□ 0.16
PRDM16-203ENST00000378391 PDE8AO60658 829 aa16.05■□□□□ 0.16
PRDM16-203ENST00000378391 TRIML1Q8N9V2 468 aa16.05■□□□□ 0.16
PRDM16-203ENST00000378391 NSUN7Q8NE18 718 aaKnown RBP16.05■□□□□ 0.16
PRDM16-203ENST00000378391 RAB3IL1Q8TBN0 382 aa16.05■□□□□ 0.16
PRDM16-203ENST00000378391 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.05■□□□□ 0.16
PRDM16-203ENST00000378391 STK24Q9Y6E0 443 aa16.05■□□□□ 0.16
PRDM16-203ENST00000378391 PABPN1LA6NDY0 278 aaKnown RBP16.04■□□□□ 0.16
PRDM16-203ENST00000378391 CLCN6P51797 869 aa16.04■□□□□ 0.16
PRDM16-203ENST00000378391 MAP7Q14244 749 aa16.04■□□□□ 0.16
PRDM16-203ENST00000378391 RPS6KA1Q15418 735 aa16.04■□□□□ 0.16
PRDM16-203ENST00000378391 SYCE1Q8N0S2 351 aa16.04■□□□□ 0.16
PRDM16-203ENST00000378391 LPIN2Q92539 896 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms