RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 USP17L22D6RA61 530 aa24.32■■□□□ 1.48
TRIM13-203ENST00000378183 USP17L17D6RBQ6 530 aa24.32■■□□□ 1.48
TRIM13-203ENST00000378183 USP17L19D6RCP7 530 aa24.32■■□□□ 1.48
TRIM13-203ENST00000378183 USP17L20D6RJB6 530 aa24.32■■□□□ 1.48
TRIM13-203ENST00000378183 NMT2O60551 498 aa24.32■■□□□ 1.48
TRIM13-203ENST00000378183 CTGFP29279 349 aa24.32■■□□□ 1.48
TRIM13-203ENST00000378183 IRX3P78415 501 aaPredicted RBP24.32■■□□□ 1.48
TRIM13-203ENST00000378183 LACTBP83111 547 aaPredicted RBP24.32■■□□□ 1.48
TRIM13-203ENST00000378183 USP17L24Q0WX57 530 aa24.32■■□□□ 1.48
TRIM13-203ENST00000378183 RRP12Q5JTH9 1297 aaKnown RBP24.32■■□□□ 1.48
TRIM13-203ENST00000378183 MFSD6Q6ZSS7 791 aa24.32■■□□□ 1.48
TRIM13-203ENST00000378183 MKL1Q969V6 931 aa24.32■■□□□ 1.48
TRIM13-203ENST00000378183 ARHGAP39Q9C0H5 1083 aa24.32■■□□□ 1.48
TRIM13-203ENST00000378183 RPAP3Q9H6T3 665 aaPredicted RBP24.32■■□□□ 1.48
TRIM13-203ENST00000378183 CLIP2Q9UDT6 1046 aa24.32■■□□□ 1.48
TRIM13-203ENST00000378183 NEDD4P46934 1319 aa24.32■■□□□ 1.48
TRIM13-203ENST00000378183 IMMTQ16891 758 aaKnown RBP24.31■■□□□ 1.48
TRIM13-203ENST00000378183 TNS4Q8IZW8 715 aa24.31■■□□□ 1.48
TRIM13-203ENST00000378183 SPICE1Q8N0Z3 855 aa24.31■■□□□ 1.48
TRIM13-203ENST00000378183 ANKRD13CQ8N6S4 541 aa24.31■■□□□ 1.48
TRIM13-203ENST00000378183 LPAR1Q92633 364 aa24.31■■□□□ 1.48
TRIM13-203ENST00000378183 TOMM22Q9NS69 142 aa24.31■■□□□ 1.48
TRIM13-203ENST00000378183 PCP11498 1178 aaKnown RBP24.3■■□□□ 1.48
TRIM13-203ENST00000378183 HERVK_113P62684 666 aa24.3■■□□□ 1.48
TRIM13-203ENST00000378183 MAP4K1Q92918 833 aa24.3■■□□□ 1.48
TRIM13-203ENST00000378183 MCOLN1Q9GZU1 580 aa24.3■■□□□ 1.48
TRIM13-203ENST00000378183 LSG1Q9H089 658 aaKnown RBP24.3■■□□□ 1.48
TRIM13-203ENST00000378183 PEX10O60683 326 aa24.29■■□□□ 1.48
TRIM13-203ENST00000378183 CDC45O75419 566 aa24.29■■□□□ 1.48
TRIM13-203ENST00000378183 TTLL1O95922 423 aa24.29■■□□□ 1.48
TRIM13-203ENST00000378183 GCLCP48506 637 aaPredicted RBP24.29■■□□□ 1.48
TRIM13-203ENST00000378183 NOVP48745 357 aa24.29■■□□□ 1.48
TRIM13-203ENST00000378183 OTOP1Q7RTM1 612 aa24.29■■□□□ 1.48
TRIM13-203ENST00000378183 RNF41Q9H4P4 317 aaPredicted RBP24.29■■□□□ 1.48
TRIM13-203ENST00000378183 ECM2O94769 699 aaPredicted RBP24.28■■□□□ 1.48
TRIM13-203ENST00000378183 GOPCQ9HD26 462 aa24.28■■□□□ 1.48
TRIM13-203ENST00000378183 TXNRD2Q9NNW7 524 aa24.28■■□□□ 1.48
TRIM13-203ENST00000378183 RBPJLQ9UBG7 517 aa24.28■■□□□ 1.48
TRIM13-203ENST00000378183 TRIM17Q9Y577 477 aa24.28■■□□□ 1.48
TRIM13-203ENST00000378183 U3KPZ7 1027 aaPredicted RBP24.28■■□□□ 1.48
TRIM13-203ENST00000378183 F5H6K3 240 aa24.27■■□□□ 1.48
TRIM13-203ENST00000378183 WDR46O15213 610 aaKnown RBP24.27■■□□□ 1.48
TRIM13-203ENST00000378183 CYP21A2P08686 494 aa24.27■■□□□ 1.48
TRIM13-203ENST00000378183 KLRC3Q07444 240 aa24.27■■□□□ 1.48
TRIM13-203ENST00000378183 FAM110CQ1W6H9 321 aa24.27■■□□□ 1.48
TRIM13-203ENST00000378183 LRRC47Q8N1G4 583 aaKnown RBP24.27■■□□□ 1.48
TRIM13-203ENST00000378183 EFCC1Q9HA90 598 aa24.27■■□□□ 1.48
TRIM13-203ENST00000378183 TCP11L1Q9NUJ3 509 aa24.27■■□□□ 1.48
TRIM13-203ENST00000378183 MORF4L1Q9UBU8 362 aa24.27■■□□□ 1.48
TRIM13-203ENST00000378183 TAF6LQ9Y6J9 622 aa24.27■■□□□ 1.48
TRIM13-203ENST00000378183 NDUFB10O96000 172 aa24.26■■□□□ 1.47
TRIM13-203ENST00000378183 TRIM47Q96LD4 638 aa24.26■■□□□ 1.47
TRIM13-203ENST00000378183 TANGO6Q9C0B7 1094 aa24.26■■□□□ 1.47
TRIM13-203ENST00000378183 SYNPO2Q9UMS6 1093 aa24.26■■□□□ 1.47
TRIM13-203ENST00000378183 RBM8AQ9Y5S9 174 aaKnown RBP24.26■■□□□ 1.47
TRIM13-203ENST00000378183 A0A0G2JMZ2 1700 aa24.26■■□□□ 1.47
TRIM13-203ENST00000378183 DOCK3Q8IZD9 2030 aa24.25■■□□□ 1.47
TRIM13-203ENST00000378183 SPDYE16A6NNV3 312 aaPredicted RBP24.25■■□□□ 1.47
TRIM13-203ENST00000378183 RAD21O60216 631 aa24.25■■□□□ 1.47
TRIM13-203ENST00000378183 CNMDO75829 334 aa24.25■■□□□ 1.47
TRIM13-203ENST00000378183 PSMC4P43686 418 aa24.25■■□□□ 1.47
TRIM13-203ENST00000378183 KIF22Q14807 665 aa24.25■■□□□ 1.47
TRIM13-203ENST00000378183 LBX2Q6XYB7 198 aa24.25■■□□□ 1.47
TRIM13-203ENST00000378183 KIAA1211Q6ZU35 1233 aa24.25■■□□□ 1.47
TRIM13-203ENST00000378183 NUP88Q99567 741 aaPredicted RBP24.25■■□□□ 1.47
TRIM13-203ENST00000378183 B4E1Z4 1266 aa24.24■■□□□ 1.47
TRIM13-203ENST00000378183 COG2Q14746 738 aa24.24■■□□□ 1.47
TRIM13-203ENST00000378183 Q3C1V9 767 aa24.24■■□□□ 1.47
TRIM13-203ENST00000378183 FAM83BQ5T0W9 1011 aa24.24■■□□□ 1.47
TRIM13-203ENST00000378183 GMCL1P1Q8NEA9 526 aa24.24■■□□□ 1.47
TRIM13-203ENST00000378183 ESR2Q92731 530 aa24.24■■□□□ 1.47
TRIM13-203ENST00000378183 STX8Q9UNK0 236 aa24.24■■□□□ 1.47
TRIM13-203ENST00000378183 COL11A1P12107 1806 aaPredicted RBP24.24■■□□□ 1.47
TRIM13-203ENST00000378183 KDM4AO75164 1064 aa24.23■■□□□ 1.47
TRIM13-203ENST00000378183 PKN2Q16513 984 aaKnown RBP24.23■■□□□ 1.47
TRIM13-203ENST00000378183 PPP4R3BQ5MIZ7 849 aa24.23■■□□□ 1.47
TRIM13-203ENST00000378183 RCSD1Q6JBY9 416 aa24.23■■□□□ 1.47
TRIM13-203ENST00000378183 GTF3C2Q8WUA4 911 aaPredicted RBP24.23■■□□□ 1.47
TRIM13-203ENST00000378183 ANO2Q9NQ90 1003 aa24.23■■□□□ 1.47
TRIM13-203ENST00000378183 FBXO28Q9NVF7 368 aa24.23■■□□□ 1.47
TRIM13-203ENST00000378183 ZSWIM5Q9P217 1185 aa24.23■■□□□ 1.47
TRIM13-203ENST00000378183 FLOT1O75955 427 aa24.22■■□□□ 1.47
TRIM13-203ENST00000378183 DSG3P32926 999 aa24.22■■□□□ 1.47
TRIM13-203ENST00000378183 CASC1Q6TDU7 716 aa24.22■■□□□ 1.47
TRIM13-203ENST00000378183 GPRC5AQ8NFJ5 357 aa24.22■■□□□ 1.47
TRIM13-203ENST00000378183 ZKSCAN3Q9BRR0 538 aa24.22■■□□□ 1.47
TRIM13-203ENST00000378183 PAGR1Q9BTK6 254 aa24.22■■□□□ 1.47
TRIM13-203ENST00000378183 HOXC10Q9NYD6 342 aa24.22■■□□□ 1.47
TRIM13-203ENST00000378183 BTBD7Q9P203 1132 aa24.22■■□□□ 1.47
TRIM13-203ENST00000378183 PTPN22Q9Y2R2 807 aa24.22■■□□□ 1.47
TRIM13-203ENST00000378183 RABGAP1Q9Y3P9 1069 aa24.22■■□□□ 1.47
TRIM13-203ENST00000378183 FMNL1O95466 1100 aaPredicted RBP24.21■■□□□ 1.47
TRIM13-203ENST00000378183 NT5C2P49902 561 aa24.21■■□□□ 1.47
TRIM13-203ENST00000378183 FCGRTP55899 365 aa24.21■■□□□ 1.47
TRIM13-203ENST00000378183 ERVK-9P63128 1117 aa24.21■■□□□ 1.47
TRIM13-203ENST00000378183 ERVK-24P63145 666 aa24.21■■□□□ 1.47
TRIM13-203ENST00000378183 ARHGEF6Q15052 776 aa24.21■■□□□ 1.47
TRIM13-203ENST00000378183 SLFN13Q68D06 897 aa24.21■■□□□ 1.47
TRIM13-203ENST00000378183 FBXO46Q6PJ61 603 aaPredicted RBP24.21■■□□□ 1.47
TRIM13-203ENST00000378183 STOX1Q6ZVD7 989 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms