RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 TTC14Q96N46 770 aa15.62■□□□□ 0.09
CKAP2-202ENST00000378034 USP17L15C9J2P7 530 aa15.62■□□□□ 0.09
CKAP2-202ENST00000378034 USP17L13C9JLJ4 530 aa15.62■□□□□ 0.09
CKAP2-202ENST00000378034 USP17L11C9JVI0 530 aa15.62■□□□□ 0.09
CKAP2-202ENST00000378034 USP17L18D6R9N7 530 aa15.62■□□□□ 0.09
CKAP2-202ENST00000378034 USP17L22D6RA61 530 aa15.62■□□□□ 0.09
CKAP2-202ENST00000378034 USP17L17D6RBQ6 530 aa15.62■□□□□ 0.09
CKAP2-202ENST00000378034 USP17L19D6RCP7 530 aa15.62■□□□□ 0.09
CKAP2-202ENST00000378034 USP17L20D6RJB6 530 aa15.62■□□□□ 0.09
CKAP2-202ENST00000378034 E7EWF7 191 aa15.62■□□□□ 0.09
CKAP2-202ENST00000378034 SLC27A2O14975 620 aa15.62■□□□□ 0.09
CKAP2-202ENST00000378034 TLR2O60603 784 aa15.62■□□□□ 0.09
CKAP2-202ENST00000378034 KDM4AO75164 1064 aa15.62■□□□□ 0.09
CKAP2-202ENST00000378034 VCAM1P19320 739 aa15.62■□□□□ 0.09
CKAP2-202ENST00000378034 USP17L24Q0WX57 530 aa15.62■□□□□ 0.09
CKAP2-202ENST00000378034 DGKZQ13574 1117 aa15.62■□□□□ 0.09
CKAP2-202ENST00000378034 CREB3L3Q68CJ9 461 aa15.62■□□□□ 0.09
CKAP2-202ENST00000378034 IQCA1Q86XH1 822 aa15.62■□□□□ 0.09
CKAP2-202ENST00000378034 PCNTO95613 3336 aa15.62■□□□□ 0.09
CKAP2-202ENST00000378034 B4E1Z4 1266 aa15.61■□□□□ 0.09
CKAP2-202ENST00000378034 WDR46O15213 610 aaKnown RBP15.61■□□□□ 0.09
CKAP2-202ENST00000378034 GMCL1P1Q8NEA9 526 aa15.61■□□□□ 0.09
CKAP2-202ENST00000378034 NCOA7Q8NI08 942 aa15.61■□□□□ 0.09
CKAP2-202ENST00000378034 GPR25O00155 361 aa15.6■□□□□ 0.09
CKAP2-202ENST00000378034 IRX3P78415 501 aaPredicted RBP15.6■□□□□ 0.09
CKAP2-202ENST00000378034 CATSPERGQ6ZRH7 1159 aa15.6■□□□□ 0.09
CKAP2-202ENST00000378034 RALYLQ86SE5 291 aaKnown RBP15.6■□□□□ 0.09
CKAP2-202ENST00000378034 DGKHQ86XP1 1220 aa15.6■□□□□ 0.09
CKAP2-202ENST00000378034 GTF3C2Q8WUA4 911 aaPredicted RBP15.6■□□□□ 0.09
CKAP2-202ENST00000378034 ASCC2Q9H1I8 757 aaPredicted RBP15.6■□□□□ 0.09
CKAP2-202ENST00000378034 PRDM10Q9NQV6 1147 aa15.6■□□□□ 0.09
CKAP2-202ENST00000378034 ZSWIM5Q9P217 1185 aa15.6■□□□□ 0.09
CKAP2-202ENST00000378034 TSKSQ9UJT2 592 aa15.6■□□□□ 0.09
CKAP2-202ENST00000378034 STX8Q9UNK0 236 aa15.6■□□□□ 0.09
CKAP2-202ENST00000378034 ADGRA2Q96PE1 1338 aa15.6■□□□□ 0.09
CKAP2-202ENST00000378034 F5H6K3 240 aa15.6■□□□□ 0.09
CKAP2-202ENST00000378034 NMT2O60551 498 aa15.6■□□□□ 0.09
CKAP2-202ENST00000378034 GCLCP48506 637 aaPredicted RBP15.6■□□□□ 0.09
CKAP2-202ENST00000378034 LBX1P52954 281 aa15.6■□□□□ 0.09
CKAP2-202ENST00000378034 KLRC3Q07444 240 aa15.6■□□□□ 0.09
CKAP2-202ENST00000378034 TSGA10IPQ3SY00 556 aa15.6■□□□□ 0.09
CKAP2-202ENST00000378034 R3HDMLQ9H3Y0 253 aa15.6■□□□□ 0.09
CKAP2-202ENST00000378034 RPAP3Q9H6T3 665 aaPredicted RBP15.6■□□□□ 0.09
CKAP2-202ENST00000378034 CYP2C8P10632 490 aa15.59■□□□□ 0.09
CKAP2-202ENST00000378034 TOP1P11387 765 aaKnown RBP15.59■□□□□ 0.09
CKAP2-202ENST00000378034 ZKSCAN1P17029 563 aaPredicted RBP15.59■□□□□ 0.09
CKAP2-202ENST00000378034 C17orf99Q6UX52 265 aa15.59■□□□□ 0.09
CKAP2-202ENST00000378034 SMCR8Q8TEV9 937 aaPredicted RBP15.59■□□□□ 0.09
CKAP2-202ENST00000378034 ANKS1AQ92625 1134 aa15.59■□□□□ 0.09
CKAP2-202ENST00000378034 ZSCAN10Q96SZ4 725 aaPredicted RBP15.59■□□□□ 0.09
CKAP2-202ENST00000378034 KIAA1755Q5JYT7 1200 aa15.58■□□□□ 0.09
CKAP2-202ENST00000378034 STOX1Q6ZVD7 989 aa15.58■□□□□ 0.09
CKAP2-202ENST00000378034 KCNB2Q92953 911 aa15.58■□□□□ 0.09
CKAP2-202ENST00000378034 UBAC1Q9BSL1 405 aa15.58■□□□□ 0.09
CKAP2-202ENST00000378034 MTA3Q9BTC8 594 aa15.58■□□□□ 0.09
CKAP2-202ENST00000378034 TAF6LQ9Y6J9 622 aa15.58■□□□□ 0.09
CKAP2-202ENST00000378034 FKTNO75072 461 aa15.58■□□□□ 0.08
CKAP2-202ENST00000378034 NDUFB10O96000 172 aa15.58■□□□□ 0.08
CKAP2-202ENST00000378034 HSPA4P34932 840 aa15.58■□□□□ 0.08
CKAP2-202ENST00000378034 KRT32Q14532 448 aa15.58■□□□□ 0.08
CKAP2-202ENST00000378034 RCSD1Q6JBY9 416 aa15.58■□□□□ 0.08
CKAP2-202ENST00000378034 SPICE1Q8N0Z3 855 aa15.58■□□□□ 0.08
CKAP2-202ENST00000378034 NKX2-3Q8TAU0 364 aa15.58■□□□□ 0.08
CKAP2-202ENST00000378034 P2RX7Q99572 595 aaKnown RBP15.58■□□□□ 0.08
CKAP2-202ENST00000378034 HOXC10Q9NYD6 342 aa15.58■□□□□ 0.08
CKAP2-202ENST00000378034 MYPNQ86TC9 1320 aa15.57■□□□□ 0.08
CKAP2-202ENST00000378034 HERVK_113P62684 666 aa15.57■□□□□ 0.08
CKAP2-202ENST00000378034 SP3Q02447 781 aa15.57■□□□□ 0.08
CKAP2-202ENST00000378034 COG2Q14746 738 aa15.57■□□□□ 0.08
CKAP2-202ENST00000378034 SLFN13Q68D06 897 aa15.57■□□□□ 0.08
CKAP2-202ENST00000378034 LBX2Q6XYB7 198 aa15.57■□□□□ 0.08
CKAP2-202ENST00000378034 LRRC47Q8N1G4 583 aaKnown RBP15.57■□□□□ 0.08
CKAP2-202ENST00000378034 ZNF296Q8WUU4 475 aaPredicted RBP15.57■□□□□ 0.08
CKAP2-202ENST00000378034 GMCL1Q96IK5 515 aa15.57■□□□□ 0.08
CKAP2-202ENST00000378034 TMEM47Q9BQJ4 181 aa15.57■□□□□ 0.08
CKAP2-202ENST00000378034 TANGO6Q9C0B7 1094 aa15.57■□□□□ 0.08
CKAP2-202ENST00000378034 RAD21O60216 631 aa15.56■□□□□ 0.08
CKAP2-202ENST00000378034 BCRP11274 1271 aa15.56■□□□□ 0.08
CKAP2-202ENST00000378034 SART3Q15020 963 aaKnown RBP15.56■□□□□ 0.08
CKAP2-202ENST00000378034 CYB5R4Q7L1T6 521 aa15.56■□□□□ 0.08
CKAP2-202ENST00000378034 MB21D2Q8IYB1 491 aaPredicted RBP15.56■□□□□ 0.08
CKAP2-202ENST00000378034 ZKSCAN3Q9BRR0 538 aa15.56■□□□□ 0.08
CKAP2-202ENST00000378034 USP26Q9BXU7 913 aa15.56■□□□□ 0.08
CKAP2-202ENST00000378034 TNKSO95271 1327 aa15.56■□□□□ 0.08
CKAP2-202ENST00000378034 ENAHQ8N8S7 591 aaPredicted RBP15.56■□□□□ 0.08
CKAP2-202ENST00000378034 ERO1AQ96HE7 468 aa15.56■□□□□ 0.08
CKAP2-202ENST00000378034 CPA4Q9UI42 421 aa15.56■□□□□ 0.08
CKAP2-202ENST00000378034 ERICH2A1L162 156 aa15.55■□□□□ 0.08
CKAP2-202ENST00000378034 MCCP23508 829 aa15.55■□□□□ 0.08
CKAP2-202ENST00000378034 MCM5P33992 734 aa15.55■□□□□ 0.08
CKAP2-202ENST00000378034 ARHGEF6Q15052 776 aa15.55■□□□□ 0.08
CKAP2-202ENST00000378034 FAM110CQ1W6H9 321 aa15.55■□□□□ 0.08
CKAP2-202ENST00000378034 FAM83BQ5T0W9 1011 aa15.55■□□□□ 0.08
CKAP2-202ENST00000378034 DCAF4Q8WV16 495 aa15.55■□□□□ 0.08
CKAP2-202ENST00000378034 MORF4L1Q9UBU8 362 aa15.55■□□□□ 0.08
CKAP2-202ENST00000378034 PARP14Q460N5 1801 aa15.55■□□□□ 0.08
CKAP2-202ENST00000378034 FLOT1O75955 427 aa15.55■□□□□ 0.08
CKAP2-202ENST00000378034 HMGB1P09429 215 aaKnown RBP15.55■□□□□ 0.08
CKAP2-202ENST00000378034 BMP3P12645 472 aa15.55■□□□□ 0.08
CKAP2-202ENST00000378034 DSG3P32926 999 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms