RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 TROAPQ12815 778 aa20.58■□□□□ 0.88
SF1-203ENST00000377387 RRAGBQ5VZM2 374 aa20.58■□□□□ 0.88
SF1-203ENST00000377387 CTR9Q6PD62 1173 aa20.58■□□□□ 0.88
SF1-203ENST00000377387 BRMS1Q9HCU9 246 aa20.58■□□□□ 0.88
SF1-203ENST00000377387 PRPF3O43395 683 aaKnown RBP20.57■□□□□ 0.88
SF1-203ENST00000377387 TFRCP02786 760 aaKnown RBP20.57■□□□□ 0.88
SF1-203ENST00000377387 PARP10Q53GL7 1025 aa20.57■□□□□ 0.88
SF1-203ENST00000377387 CAVIN4Q5BKX8 364 aa20.57■□□□□ 0.88
SF1-203ENST00000377387 FAM182BQ5T319 152 aa20.57■□□□□ 0.88
SF1-203ENST00000377387 CDC5LQ99459 802 aaKnown RBP20.57■□□□□ 0.88
SF1-203ENST00000377387 MYH6P13533 1939 aa20.57■□□□□ 0.88
SF1-203ENST00000377387 CCDC175P0C221 793 aa20.57■□□□□ 0.88
SF1-203ENST00000377387 APTXQ7Z2E3 356 aaKnown RBP20.57■□□□□ 0.88
SF1-203ENST00000377387 SLC51AQ86UW1 340 aa20.57■□□□□ 0.88
SF1-203ENST00000377387 ZCCHC17Q9NP64 241 aaKnown RBP20.57■□□□□ 0.88
SF1-203ENST00000377387 MRFAP1Q9Y605 127 aa20.57■□□□□ 0.88
SF1-203ENST00000377387 PIP4K2BP78356 416 aa20.57■□□□□ 0.88
SF1-203ENST00000377387 CUL4BQ13620 913 aa20.57■□□□□ 0.88
SF1-203ENST00000377387 KIFC2Q96AC6 838 aa20.57■□□□□ 0.88
SF1-203ENST00000377387 NID2Q14112 1375 aa20.57■□□□□ 0.88
SF1-203ENST00000377387 ANKRD36CQ5JPF3 1778 aa20.56■□□□□ 0.88
SF1-203ENST00000377387 PPP1R3GB7ZBB8 358 aa20.56■□□□□ 0.88
SF1-203ENST00000377387 EP400Q96L91 3159 aa20.56■□□□□ 0.88
SF1-203ENST00000377387 ABL1P00519 1130 aa20.56■□□□□ 0.88
SF1-203ENST00000377387 FXR1P51114 621 aaKnown RBP eCLIP20.56■□□□□ 0.88
SF1-203ENST00000377387 CTCFLQ8NI51 663 aaPredicted RBP20.56■□□□□ 0.88
SF1-203ENST00000377387 RASGRP4Q8TDF6 673 aa20.56■□□□□ 0.88
SF1-203ENST00000377387 CELF1Q92879 486 aaKnown RBP20.56■□□□□ 0.88
SF1-203ENST00000377387 PLIN2Q99541 437 aa20.56■□□□□ 0.88
SF1-203ENST00000377387 ADD3Q9UEY8 706 aaKnown RBP20.56■□□□□ 0.88
SF1-203ENST00000377387 COL4A1P02462 1669 aa20.56■□□□□ 0.88
SF1-203ENST00000377387 GOLGA6L9A6NEM1 432 aa20.55■□□□□ 0.88
SF1-203ENST00000377387 PES1O00541 588 aaKnown RBP20.55■□□□□ 0.88
SF1-203ENST00000377387 FILIP1LQ4L180 1135 aa20.55■□□□□ 0.88
SF1-203ENST00000377387 ACRBPQ8NEB7 543 aa20.55■□□□□ 0.88
SF1-203ENST00000377387 FAM84BQ96KN1 310 aaPredicted RBP20.55■□□□□ 0.88
SF1-203ENST00000377387 TAF1P21675 1872 aa20.55■□□□□ 0.88
SF1-203ENST00000377387 N4BP3O15049 544 aa20.55■□□□□ 0.88
SF1-203ENST00000377387 ZRANB2O95218 330 aaKnown RBP eCLIP20.55■□□□□ 0.881e-6■■■□□ 14.8
SF1-203ENST00000377387 NPY5RQ15761 445 aa20.55■□□□□ 0.88
SF1-203ENST00000377387 ZNF569Q5MCW4 686 aa20.55■□□□□ 0.88
SF1-203ENST00000377387 PARD6BQ9BYG5 372 aa20.55■□□□□ 0.88
SF1-203ENST00000377387 TAB2Q9NYJ8 693 aa20.55■□□□□ 0.88
SF1-203ENST00000377387 ADGRG1Q9Y653 693 aa20.55■□□□□ 0.88
SF1-203ENST00000377387 TMTC3Q6ZXV5 915 aa20.54■□□□□ 0.88
SF1-203ENST00000377387 ANAPC4Q9UJX5 808 aa20.54■□□□□ 0.88
SF1-203ENST00000377387 XDHP47989 1333 aa20.54■□□□□ 0.88
SF1-203ENST00000377387 SASH3O75995 380 aa20.54■□□□□ 0.88
SF1-203ENST00000377387 SH3RF1Q7Z6J0 888 aa20.54■□□□□ 0.88
SF1-203ENST00000377387 GPKOWQ92917 476 aaPredicted RBP eCLIP20.54■□□□□ 0.883e-7■■□□□ 13
SF1-203ENST00000377387 FERMT2Q96AC1 680 aa20.54■□□□□ 0.88
SF1-203ENST00000377387 EEF2KMTQ96G04 330 aa20.54■□□□□ 0.88
SF1-203ENST00000377387 MINPP1Q9UNW1 487 aa20.54■□□□□ 0.88
SF1-203ENST00000377387 COL1A1P02452 1464 aaPredicted RBP20.54■□□□□ 0.88
SF1-203ENST00000377387 GSDMAQ96QA5 445 aa20.54■□□□□ 0.88
SF1-203ENST00000377387 TSPY2A6NKD2 308 aa20.53■□□□□ 0.88
SF1-203ENST00000377387 RNF225M0QZC1 329 aaPredicted RBP20.53■□□□□ 0.88
SF1-203ENST00000377387 PRDX5P30044 214 aa20.53■□□□□ 0.88
SF1-203ENST00000377387 IL17AQ16552 155 aa20.53■□□□□ 0.88
SF1-203ENST00000377387 GYPCP04921 128 aa20.53■□□□□ 0.88
SF1-203ENST00000377387 MECOMQ03112 1051 aa20.53■□□□□ 0.88
SF1-203ENST00000377387 RASSF8Q8NHQ8 419 aa20.53■□□□□ 0.88
SF1-203ENST00000377387 MTRQ99707 1265 aa20.53■□□□□ 0.88
SF1-203ENST00000377387 MTA3Q9BTC8 594 aa20.53■□□□□ 0.88
SF1-203ENST00000377387 RBM28Q9NW13 759 aaKnown RBP20.53■□□□□ 0.88
SF1-203ENST00000377387 GDAQ9Y2T3 454 aa20.53■□□□□ 0.88
SF1-203ENST00000377387 RCAN1P53805 252 aa20.52■□□□□ 0.88
SF1-203ENST00000377387 KRT31Q15323 416 aa20.52■□□□□ 0.88
SF1-203ENST00000377387 PANX2Q96RD6 677 aa20.52■□□□□ 0.88
SF1-203ENST00000377387 NUP88Q99567 741 aaPredicted RBP20.52■□□□□ 0.88
SF1-203ENST00000377387 CNTNAP5Q8WYK1 1306 aa20.52■□□□□ 0.88
SF1-203ENST00000377387 MFAP3LO75121 409 aa20.52■□□□□ 0.88
SF1-203ENST00000377387 KIF4BQ2VIQ3 1234 aa20.52■□□□□ 0.88
SF1-203ENST00000377387 CC2D1AQ6P1N0 951 aaPredicted RBP20.52■□□□□ 0.88
SF1-203ENST00000377387 IQUBQ8NA54 791 aa20.52■□□□□ 0.88
SF1-203ENST00000377387 DOCK2Q92608 1830 aa20.52■□□□□ 0.87
SF1-203ENST00000377387 NHSL1Q5SYE7 1610 aa20.51■□□□□ 0.87
SF1-203ENST00000377387 KIF5CO60282 957 aa20.51■□□□□ 0.87
SF1-203ENST00000377387 PPP2R5BQ15173 497 aa20.51■□□□□ 0.87
SF1-203ENST00000377387 CDKAL1Q5VV42 579 aa20.51■□□□□ 0.87
SF1-203ENST00000377387 TNFRSF25Q93038 417 aa20.51■□□□□ 0.87
SF1-203ENST00000377387 MYH14Q7Z406 1995 aaKnown RBP20.51■□□□□ 0.87
SF1-203ENST00000377387 SCG2P13521 617 aa20.51■□□□□ 0.87
SF1-203ENST00000377387 ATP2C1P98194 919 aaPredicted RBP20.51■□□□□ 0.87
SF1-203ENST00000377387 GPR161Q8N6U8 529 aaKnown RBP20.51■□□□□ 0.87
SF1-203ENST00000377387 TIAM2Q8IVF5 1701 aa20.51■□□□□ 0.87
SF1-203ENST00000377387 ZNF804BA4D1E1 1349 aa20.51■□□□□ 0.87
SF1-203ENST00000377387 TBC1D8O95759 1140 aa20.5■□□□□ 0.87
SF1-203ENST00000377387 GYS2P54840 703 aa20.5■□□□□ 0.87
SF1-203ENST00000377387 FAM98CQ17RN3 349 aaKnown RBP20.5■□□□□ 0.87
SF1-203ENST00000377387 GOLGA1Q92805 767 aa20.5■□□□□ 0.87
SF1-203ENST00000377387 BRIP1Q9BX63 1249 aa20.5■□□□□ 0.87
SF1-203ENST00000377387 DCP1AQ9NPI6 582 aaPredicted RBP20.5■□□□□ 0.87
SF1-203ENST00000377387 SPATA31A1Q5TZJ5 1347 aa20.5■□□□□ 0.87
SF1-203ENST00000377387 DOT1LQ8TEK3 1739 aa20.5■□□□□ 0.87
SF1-203ENST00000377387 PP2D1A8MPX8 630 aa20.5■□□□□ 0.87
SF1-203ENST00000377387 TPM1P09493 284 aa20.5■□□□□ 0.87
SF1-203ENST00000377387 UBE4AQ14139 1066 aa20.5■□□□□ 0.87
SF1-203ENST00000377387 NELFBQ8WX92 580 aa20.5■□□□□ 0.87
SF1-203ENST00000377387 NSUN4Q96CB9 384 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms