RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 RBM19Q9Y4C8 960 aaKnown RBP24.94■■□□□ 1.58
CBWD3-202ENST00000377342 NID2Q14112 1375 aa24.94■■□□□ 1.58
CBWD3-202ENST00000377342 PARP14Q460N5 1801 aa24.94■■□□□ 1.58
CBWD3-202ENST00000377342 KIAA1755Q5JYT7 1200 aa24.94■■□□□ 1.58
CBWD3-202ENST00000377342 SNX21Q969T3 373 aa24.94■■□□□ 1.58
CBWD3-202ENST00000377342 OPTNQ96CV9 577 aa24.94■■□□□ 1.58
CBWD3-202ENST00000377342 AS3MTQ9HBK9 375 aa24.94■■□□□ 1.58
CBWD3-202ENST00000377342 SYNPO2Q9UMS6 1093 aa24.94■■□□□ 1.58
CBWD3-202ENST00000377342 SLC12A7Q9Y666 1083 aa24.94■■□□□ 1.58
CBWD3-202ENST00000377342 TLL2Q9Y6L7 1015 aa24.94■■□□□ 1.58
CBWD3-202ENST00000377342 GOLGA8BA8MQT2 603 aa24.93■■□□□ 1.58
CBWD3-202ENST00000377342 RXRAP19793 462 aa24.93■■□□□ 1.58
CBWD3-202ENST00000377342 PPATQ06203 517 aa24.93■■□□□ 1.58
CBWD3-202ENST00000377342 SPP2Q13103 211 aa24.93■■□□□ 1.58
CBWD3-202ENST00000377342 DGKZQ13574 1117 aa24.93■■□□□ 1.58
CBWD3-202ENST00000377342 MTMR2Q13614 643 aa24.93■■□□□ 1.58
CBWD3-202ENST00000377342 ME3Q16798 604 aa24.93■■□□□ 1.58
CBWD3-202ENST00000377342 TBC1D2Q9BYX2 928 aa24.93■■□□□ 1.58
CBWD3-202ENST00000377342 KIAA1683Q9H0B3 1180 aa24.93■■□□□ 1.58
CBWD3-202ENST00000377342 TRIM75PA6NK02 468 aa24.92■■□□□ 1.58
CBWD3-202ENST00000377342 TMEM88BA6NKF7 163 aa24.92■■□□□ 1.58
CBWD3-202ENST00000377342 DDAH1O94760 285 aa24.92■■□□□ 1.58
CBWD3-202ENST00000377342 PDIA3P30101 505 aaKnown RBP24.92■■□□□ 1.58
CBWD3-202ENST00000377342 PPIL2Q13356 520 aa24.92■■□□□ 1.58
CBWD3-202ENST00000377342 MICU3Q86XE3 530 aa24.92■■□□□ 1.58
CBWD3-202ENST00000377342 GMCL1P1Q8NEA9 526 aa24.92■■□□□ 1.58
CBWD3-202ENST00000377342 LIMCH1Q9UPQ0 1083 aa24.92■■□□□ 1.58
CBWD3-202ENST00000377342 IRF6O14896 467 aa24.91■■□□□ 1.58
CBWD3-202ENST00000377342 ST3GAL1Q11201 340 aa24.91■■□□□ 1.58
CBWD3-202ENST00000377342 ZYXQ15942 572 aaKnown RBP24.91■■□□□ 1.58
CBWD3-202ENST00000377342 CATIPQ7Z7H3 387 aa24.91■■□□□ 1.58
CBWD3-202ENST00000377342 FEZ1Q99689 392 aa24.91■■□□□ 1.58
CBWD3-202ENST00000377342 NDUFB10O96000 172 aa24.91■■□□□ 1.58
CBWD3-202ENST00000377342 SNHG28P0DPA3 235 aa24.91■■□□□ 1.58
CBWD3-202ENST00000377342 BACE1P56817 501 aa24.91■■□□□ 1.58
CBWD3-202ENST00000377342 SLC10A4Q96EP9 437 aa24.91■■□□□ 1.58
CBWD3-202ENST00000377342 ZNF274Q96GC6 653 aaPredicted RBP24.91■■□□□ 1.58
CBWD3-202ENST00000377342 WNK4Q96J92 1243 aa24.91■■□□□ 1.58
CBWD3-202ENST00000377342 SH2D4AQ9H788 454 aa24.91■■□□□ 1.58
CBWD3-202ENST00000377342 VCPKMTQ9H867 229 aa24.91■■□□□ 1.58
CBWD3-202ENST00000377342 USP17L10C9JJH3 530 aa24.9■■□□□ 1.58
CBWD3-202ENST00000377342 F5H6K3 240 aa24.9■■□□□ 1.58
CBWD3-202ENST00000377342 ZBTB43O43298 467 aa24.9■■□□□ 1.58
CBWD3-202ENST00000377342 PDHBP11177 359 aa24.9■■□□□ 1.58
CBWD3-202ENST00000377342 MCM2P49736 904 aa24.9■■□□□ 1.58
CBWD3-202ENST00000377342 RCAN1P53805 252 aa24.9■■□□□ 1.58
CBWD3-202ENST00000377342 KLRC3Q07444 240 aa24.9■■□□□ 1.58
CBWD3-202ENST00000377342 NAP1L2Q9ULW6 460 aaPredicted RBP24.9■■□□□ 1.58
CBWD3-202ENST00000377342 KCNH4Q9UQ05 1017 aa24.9■■□□□ 1.58
CBWD3-202ENST00000377342 MTMR7Q9Y216 660 aa24.9■■□□□ 1.58
CBWD3-202ENST00000377342 RASAL3Q86YV0 1011 aa24.89■■□□□ 1.58
CBWD3-202ENST00000377342 CCDC144CPQ8IYA2 1237 aa24.89■■□□□ 1.58
CBWD3-202ENST00000377342 CHMP4CQ96CF2 233 aa24.89■■□□□ 1.58
CBWD3-202ENST00000377342 EMILIN3Q9NT22 766 aa24.89■■□□□ 1.58
CBWD3-202ENST00000377342 STK3Q13188 491 aa24.88■■□□□ 1.57
CBWD3-202ENST00000377342 GRM4Q14833 912 aa24.88■■□□□ 1.57
CBWD3-202ENST00000377342 SPICE1Q8N0Z3 855 aa24.88■■□□□ 1.57
CBWD3-202ENST00000377342 NUP133Q8WUM0 1156 aa24.88■■□□□ 1.57
CBWD3-202ENST00000377342 TMX3Q96JJ7 454 aa24.88■■□□□ 1.57
CBWD3-202ENST00000377342 GOPCQ9HD26 462 aa24.88■■□□□ 1.57
CBWD3-202ENST00000377342 RLFQ13129 1914 aa24.88■■□□□ 1.57
CBWD3-202ENST00000377342 GOLGA8AA7E2F4 631 aa24.88■■□□□ 1.57
CBWD3-202ENST00000377342 PFKFB2O60825 505 aa24.88■■□□□ 1.57
CBWD3-202ENST00000377342 APLP1P51693 650 aa24.88■■□□□ 1.57
CBWD3-202ENST00000377342 HMGCS2P54868 508 aa24.88■■□□□ 1.57
CBWD3-202ENST00000377342 SLFN13Q68D06 897 aa24.88■■□□□ 1.57
CBWD3-202ENST00000377342 GMCL1Q96IK5 515 aa24.88■■□□□ 1.57
CBWD3-202ENST00000377342 FAM217BQ9NTX9 383 aaPredicted RBP24.88■■□□□ 1.57
CBWD3-202ENST00000377342 ABT1Q9ULW3 272 aaKnown RBP24.88■■□□□ 1.57
CBWD3-202ENST00000377342 K7ELQ4 463 aaPredicted RBP24.87■■□□□ 1.57
CBWD3-202ENST00000377342 CDC27P30260 824 aa24.87■■□□□ 1.57
CBWD3-202ENST00000377342 METAP2P50579 478 aaKnown RBP eCLIP24.87■■□□□ 1.57
CBWD3-202ENST00000377342 SCRN1Q12765 414 aa24.87■■□□□ 1.57
CBWD3-202ENST00000377342 SH3D19Q5HYK7 790 aa24.87■■□□□ 1.57
CBWD3-202ENST00000377342 SPRYD7Q5W111 196 aa24.87■■□□□ 1.57
CBWD3-202ENST00000377342 RGMBQ6NW40 437 aa24.87■■□□□ 1.57
CBWD3-202ENST00000377342 NECAB1Q8N987 351 aa24.87■■□□□ 1.57
CBWD3-202ENST00000377342 GTF3C6Q969F1 213 aa24.87■■□□□ 1.57
CBWD3-202ENST00000377342 C12orf42Q96LP6 360 aa24.87■■□□□ 1.57
CBWD3-202ENST00000377342 NUP88Q99567 741 aaPredicted RBP24.87■■□□□ 1.57
CBWD3-202ENST00000377342 NCOA5Q9HCD5 579 aaKnown RBP24.87■■□□□ 1.57
CBWD3-202ENST00000377342 A0A0G2JLL6 359 aaPredicted RBP24.86■■□□□ 1.57
CBWD3-202ENST00000377342 CALM1P0DP23 149 aa24.86■■□□□ 1.57
CBWD3-202ENST00000377342 CALM2P0DP24 149 aa24.86■■□□□ 1.57
CBWD3-202ENST00000377342 CALM3P0DP25 149 aa24.86■■□□□ 1.57
CBWD3-202ENST00000377342 USP14P54578 494 aa24.86■■□□□ 1.57
CBWD3-202ENST00000377342 CCT2P78371 535 aaKnown RBP24.86■■□□□ 1.57
CBWD3-202ENST00000377342 USP17L2Q6R6M4 530 aa24.86■■□□□ 1.57
CBWD3-202ENST00000377342 SYNE3Q6ZMZ3 975 aa24.86■■□□□ 1.57
CBWD3-202ENST00000377342 PRRT2Q7Z6L0 340 aaPredicted RBP24.86■■□□□ 1.57
CBWD3-202ENST00000377342 HSCBQ8IWL3 235 aa24.86■■□□□ 1.57
CBWD3-202ENST00000377342 MAP3K14Q99558 947 aa24.86■■□□□ 1.57
CBWD3-202ENST00000377342 MAD2L2Q9UI95 211 aa24.86■■□□□ 1.57
CBWD3-202ENST00000377342 BAZ2BQ9UIF8 2168 aaKnown RBP24.86■■□□□ 1.57
CBWD3-202ENST00000377342 C19orf81C9J6K1 198 aa24.85■■□□□ 1.57
CBWD3-202ENST00000377342 CXCL11O14625 94 aa24.85■■□□□ 1.57
CBWD3-202ENST00000377342 RAD21O60216 631 aa24.85■■□□□ 1.57
CBWD3-202ENST00000377342 ZNF543Q08ER8 600 aa24.85■■□□□ 1.57
CBWD3-202ENST00000377342 MOGSQ13724 837 aa24.85■■□□□ 1.57
CBWD3-202ENST00000377342 RTN1Q16799 776 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms