RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 EXOC3O60645 756 aa19.93■□□□□ 0.78
CLSTN1-202ENST00000377298 MAEAQ7L5Y9 396 aa19.93■□□□□ 0.78
CLSTN1-202ENST00000377298 MIER3Q7Z3K6 550 aa19.93■□□□□ 0.78
CLSTN1-202ENST00000377298 TTLL11Q8NHH1 800 aa19.93■□□□□ 0.78
CLSTN1-202ENST00000377298 IWS1Q96ST2 819 aa19.93■□□□□ 0.78
CLSTN1-202ENST00000377298 MRPL44Q9H9J2 332 aaKnown RBP19.93■□□□□ 0.78
CLSTN1-202ENST00000377298 LMBRD1Q9NUN5 540 aa19.93■□□□□ 0.78
CLSTN1-202ENST00000377298 BSDC1Q9NW68 430 aaPredicted RBP19.93■□□□□ 0.78
CLSTN1-202ENST00000377298 NPR1P16066 1061 aa19.93■□□□□ 0.78
CLSTN1-202ENST00000377298 ZNF445P59923 1031 aa19.93■□□□□ 0.78
CLSTN1-202ENST00000377298 SLFN12Q8IYM2 578 aa19.93■□□□□ 0.78
CLSTN1-202ENST00000377298 CBX8Q9HC52 389 aa19.93■□□□□ 0.78
CLSTN1-202ENST00000377298 MTUS1Q9ULD2 1270 aa19.93■□□□□ 0.78
CLSTN1-202ENST00000377298 AXIN2Q9Y2T1 843 aa19.93■□□□□ 0.78
CLSTN1-202ENST00000377298 TULP4Q9NRJ4 1543 aa19.93■□□□□ 0.78
CLSTN1-202ENST00000377298 GCNT3O95395 438 aa19.93■□□□□ 0.78
CLSTN1-202ENST00000377298 RBSNQ9H1K0 784 aa19.93■□□□□ 0.78
CLSTN1-202ENST00000377298 ARHGEF16Q5VV41 709 aa19.93■□□□□ 0.78
CLSTN1-202ENST00000377298 TPH2Q8IWU9 490 aa19.93■□□□□ 0.78
CLSTN1-202ENST00000377298 FNBP4Q8N3X1 1017 aaPredicted RBP19.93■□□□□ 0.78
CLSTN1-202ENST00000377298 PODXL2Q9NZ53 605 aa19.93■□□□□ 0.78
CLSTN1-202ENST00000377298 SRP68Q9UHB9 627 aaKnown RBP19.93■□□□□ 0.78
CLSTN1-202ENST00000377298 GADD45BO75293 160 aaPredicted RBP19.92■□□□□ 0.78
CLSTN1-202ENST00000377298 FOSP01100 380 aaPredicted RBP19.92■□□□□ 0.78
CLSTN1-202ENST00000377298 CYP26C1Q6V0L0 522 aa19.92■□□□□ 0.78
CLSTN1-202ENST00000377298 GINS2Q9Y248 185 aa19.92■□□□□ 0.78
CLSTN1-202ENST00000377298 CCDC93Q567U6 631 aa19.92■□□□□ 0.78
CLSTN1-202ENST00000377298 TRIM6Q9C030 488 aaPredicted RBP19.92■□□□□ 0.78
CLSTN1-202ENST00000377298 ABCA9Q8IUA7 1624 aa19.92■□□□□ 0.78
CLSTN1-202ENST00000377298 TUBBP07437 444 aa19.92■□□□□ 0.78
CLSTN1-202ENST00000377298 GOLGA8HP0CJ92 632 aa19.92■□□□□ 0.78
CLSTN1-202ENST00000377298 SERTAD1Q9UHV2 236 aa19.92■□□□□ 0.78
CLSTN1-202ENST00000377298 PCDHA12Q9UN75 941 aa19.92■□□□□ 0.78
CLSTN1-202ENST00000377298 MTMR6Q9Y217 621 aa19.92■□□□□ 0.78
CLSTN1-202ENST00000377298 SSX2IPQ9Y2D8 614 aa19.92■□□□□ 0.78
CLSTN1-202ENST00000377298 TRPM1Q7Z4N2 1603 aa19.92■□□□□ 0.78
CLSTN1-202ENST00000377298 SPHKAPQ2M3C7 1700 aa19.92■□□□□ 0.78
CLSTN1-202ENST00000377298 CCDC84Q86UT8 332 aaPredicted RBP19.92■□□□□ 0.78
CLSTN1-202ENST00000377298 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.92■□□□□ 0.78
CLSTN1-202ENST00000377298 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.92■□□□□ 0.78
CLSTN1-202ENST00000377298 TMEM232C9JQI7 657 aa19.91■□□□□ 0.78
CLSTN1-202ENST00000377298 CYP21A2P08686 494 aa19.91■□□□□ 0.78
CLSTN1-202ENST00000377298 TNNC1P63316 161 aa19.91■□□□□ 0.78
CLSTN1-202ENST00000377298 INF2Q27J81 1249 aa19.91■□□□□ 0.78
CLSTN1-202ENST00000377298 ASPRV1Q53RT3 343 aa19.91■□□□□ 0.78
CLSTN1-202ENST00000377298 NELFBQ8WX92 580 aa19.91■□□□□ 0.78
CLSTN1-202ENST00000377298 PAGR1Q9BTK6 254 aa19.91■□□□□ 0.78
CLSTN1-202ENST00000377298 USP31Q70CQ4 1352 aa19.91■□□□□ 0.78
CLSTN1-202ENST00000377298 DTNBO60941 627 aa19.91■□□□□ 0.78
CLSTN1-202ENST00000377298 OR52Z1P0C646 297 aa19.91■□□□□ 0.78
CLSTN1-202ENST00000377298 ASIC2Q16515 512 aa19.91■□□□□ 0.78
CLSTN1-202ENST00000377298 CSRNP1Q96S65 589 aa19.91■□□□□ 0.78
CLSTN1-202ENST00000377298 PTCH1Q13635 1447 aa19.91■□□□□ 0.78
CLSTN1-202ENST00000377298 USP28Q96RU2 1077 aa19.91■□□□□ 0.78
CLSTN1-202ENST00000377298 PSMD1Q99460 953 aa19.91■□□□□ 0.78
CLSTN1-202ENST00000377298 ANTXR1Q9H6X2 564 aa19.91■□□□□ 0.78
CLSTN1-202ENST00000377298 TICAM2Q86XR7 235 aa19.91■□□□□ 0.78
CLSTN1-202ENST00000377298 GLG1Q92896 1179 aa19.91■□□□□ 0.78
CLSTN1-202ENST00000377298 PRR16Q569H4 304 aa19.9■□□□□ 0.78
CLSTN1-202ENST00000377298 IMPACTQ9P2X3 320 aa19.9■□□□□ 0.78
CLSTN1-202ENST00000377298 TESPA1A2RU30 521 aaPredicted RBP19.9■□□□□ 0.78
CLSTN1-202ENST00000377298 STAMBPO95630 424 aa19.9■□□□□ 0.78
CLSTN1-202ENST00000377298 PFKFB1P16118 471 aa19.9■□□□□ 0.78
CLSTN1-202ENST00000377298 NOX5Q96PH1 765 aa19.9■□□□□ 0.78
CLSTN1-202ENST00000377298 DHX36Q9H2U1 1008 aaKnown RBP19.9■□□□□ 0.78
CLSTN1-202ENST00000377298 DBNDD1Q9H9R9 158 aa19.9■□□□□ 0.78
CLSTN1-202ENST00000377298 M0R2C6 588 aa19.9■□□□□ 0.78
CLSTN1-202ENST00000377298 GRIPAP1Q4V328 841 aa19.9■□□□□ 0.78
CLSTN1-202ENST00000377298 SYT10Q6XYQ8 523 aa19.9■□□□□ 0.78
CLSTN1-202ENST00000377298 KRT26Q7Z3Y9 468 aa19.9■□□□□ 0.78
CLSTN1-202ENST00000377298 TBC1D7Q9P0N9 293 aa19.9■□□□□ 0.78
CLSTN1-202ENST00000377298 FLOT1O75955 427 aa19.9■□□□□ 0.78
CLSTN1-202ENST00000377298 SNX16P57768 344 aa19.9■□□□□ 0.78
CLSTN1-202ENST00000377298 SLC9C1Q4G0N8 1177 aa19.9■□□□□ 0.78
CLSTN1-202ENST00000377298 FBXO18Q8NFZ0 1043 aa19.9■□□□□ 0.78
CLSTN1-202ENST00000377298 CAPZA3Q96KX2 299 aa19.9■□□□□ 0.78
CLSTN1-202ENST00000377298 RNF26Q9BY78 433 aaPredicted RBP19.9■□□□□ 0.78
CLSTN1-202ENST00000377298 BTBD18B2RXH4 712 aa19.89■□□□□ 0.78
CLSTN1-202ENST00000377298 SEL1L2Q5TEA6 688 aa19.89■□□□□ 0.78
CLSTN1-202ENST00000377298 NELFCDQ8IXH7 590 aa19.89■□□□□ 0.78
CLSTN1-202ENST00000377298 RASEFQ8IZ41 740 aa19.89■□□□□ 0.78
CLSTN1-202ENST00000377298 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.89■□□□□ 0.78
CLSTN1-202ENST00000377298 AMNQ9BXJ7 453 aa19.89■□□□□ 0.78
CLSTN1-202ENST00000377298 PCDHA1Q9Y5I3 950 aa19.89■□□□□ 0.78
CLSTN1-202ENST00000377298 A0A1W2PRG0 241 aa19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 CMA1P23946 247 aa19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 RAD51AP2Q09MP3 1159 aa19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 SREK1Q8WXA9 508 aaKnown RBP19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 NARFQ9UHQ1 456 aa19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 SERPINB13Q9UIV8 391 aa19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.89■□□□□ 0.771e-7■■■■■ 27.2
CLSTN1-202ENST00000377298 M0QZ92 97 aa19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 GNA14O95837 355 aa19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 TTLL1O95922 423 aa19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 DYNLL1P63167 89 aaKnown RBP19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 LIN9Q5TKA1 542 aa19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 APOA5Q6Q788 366 aa19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 PLCD3Q8N3E9 789 aa19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 STAMQ92783 540 aa19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 IQCDQ96DY2 449 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms