RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 PUS7LQ9H0K6 701 aaKnown RBP25.3■■□□□ 1.64
VSX1-201ENST00000376707 SH2D4AQ9H788 454 aa25.3■■□□□ 1.64
VSX1-201ENST00000376707 HOXC10Q9NYD6 342 aa25.3■■□□□ 1.64
VSX1-201ENST00000376707 IVNS1ABPQ9Y6Y0 642 aa25.3■■□□□ 1.64
VSX1-201ENST00000376707 SLC15A5A6NIM6 579 aa25.29■■□□□ 1.64
VSX1-201ENST00000376707 CDK8P49336 464 aa25.29■■□□□ 1.64
VSX1-201ENST00000376707 CEP290O15078 2479 aa25.29■■□□□ 1.64
VSX1-201ENST00000376707 PTPREP23469 700 aa25.28■■□□□ 1.64
VSX1-201ENST00000376707 C16orf86Q6ZW13 317 aa25.28■■□□□ 1.64
VSX1-201ENST00000376707 CLEC10AQ8IUN9 316 aa25.28■■□□□ 1.64
VSX1-201ENST00000376707 LPAR1Q92633 364 aa25.28■■□□□ 1.64
VSX1-201ENST00000376707 NBPF3Q9H094 633 aa25.28■■□□□ 1.64
VSX1-201ENST00000376707 OGDHLQ9ULD0 1010 aa25.28■■□□□ 1.64
VSX1-201ENST00000376707 SMIM22K7EJ46 135 aa25.27■■□□□ 1.64
VSX1-201ENST00000376707 KBTBD3Q8NAB2 608 aa25.27■■□□□ 1.64
VSX1-201ENST00000376707 RBM27Q9P2N5 1060 aaKnown RBP25.27■■□□□ 1.64
VSX1-201ENST00000376707 TMX2Q9Y320 296 aa25.27■■□□□ 1.64
VSX1-201ENST00000376707 KIAA1755Q5JYT7 1200 aa25.26■■□□□ 1.63
VSX1-201ENST00000376707 MFSD14CQ5VZR4 134 aa25.26■■□□□ 1.63
VSX1-201ENST00000376707 TSHZ3Q63HK5 1081 aa25.26■■□□□ 1.63
VSX1-201ENST00000376707 CTR9Q6PD62 1173 aa25.26■■□□□ 1.63
VSX1-201ENST00000376707 SIAH1Q8IUQ4 282 aa25.26■■□□□ 1.63
VSX1-201ENST00000376707 SPICE1Q8N0Z3 855 aa25.26■■□□□ 1.63
VSX1-201ENST00000376707 C11orf49Q9H6J7 331 aa25.26■■□□□ 1.63
VSX1-201ENST00000376707 ARPP21Q9UBL0 812 aaPredicted RBP25.26■■□□□ 1.63
VSX1-201ENST00000376707 CCND3P30281 292 aaPredicted RBP25.25■■□□□ 1.63
VSX1-201ENST00000376707 RRP1P56182 461 aaKnown RBP25.25■■□□□ 1.63
VSX1-201ENST00000376707 GRB14Q14449 540 aa25.25■■□□□ 1.63
VSX1-201ENST00000376707 STRBPQ96SI9 672 aaKnown RBP25.25■■□□□ 1.63
VSX1-201ENST00000376707 VCPKMTQ9H867 229 aa25.25■■□□□ 1.63
VSX1-201ENST00000376707 BAZ2AQ9UIF9 1905 aaKnown RBP25.24■■□□□ 1.63
VSX1-201ENST00000376707 FLOT1O75955 427 aa25.24■■□□□ 1.63
VSX1-201ENST00000376707 MNX1P50219 401 aaPredicted RBP25.24■■□□□ 1.63
VSX1-201ENST00000376707 ATP2B2Q01814 1243 aa25.24■■□□□ 1.63
VSX1-201ENST00000376707 MB21D1Q8N884 522 aa25.24■■□□□ 1.63
VSX1-201ENST00000376707 MOV10L1Q9BXT6 1211 aaKnown RBP25.24■■□□□ 1.63
VSX1-201ENST00000376707 MYH7P12883 1935 aa25.24■■□□□ 1.63
VSX1-201ENST00000376707 HOXC6P09630 235 aa25.23■■□□□ 1.63
VSX1-201ENST00000376707 DSG3P32926 999 aa25.23■■□□□ 1.63
VSX1-201ENST00000376707 APPBP2Q92624 585 aa25.23■■□□□ 1.63
VSX1-201ENST00000376707 SPATC1LQ9H0A9 340 aa25.23■■□□□ 1.63
VSX1-201ENST00000376707 KANSL2Q9H9L4 492 aa25.23■■□□□ 1.63
VSX1-201ENST00000376707 FLRT1Q9NZU1 646 aa25.23■■□□□ 1.63
VSX1-201ENST00000376707 PCDHB15Q9Y5E8 787 aa25.23■■□□□ 1.63
VSX1-201ENST00000376707 WDR46O15213 610 aaKnown RBP25.22■■□□□ 1.63
VSX1-201ENST00000376707 RNF113AO15541 343 aaKnown RBP25.22■■□□□ 1.63
VSX1-201ENST00000376707 ZFYP08048 801 aaPredicted RBP25.22■■□□□ 1.63
VSX1-201ENST00000376707 EEF2P13639 858 aaKnown RBP25.22■■□□□ 1.63
VSX1-201ENST00000376707 PLS1Q14651 629 aa25.22■■□□□ 1.63
VSX1-201ENST00000376707 SAMD1Q6SPF0 538 aaPredicted RBP25.22■■□□□ 1.63
VSX1-201ENST00000376707 C7orf61Q8IZ16 206 aa25.22■■□□□ 1.63
VSX1-201ENST00000376707 OSBP2Q969R2 916 aa25.22■■□□□ 1.63
VSX1-201ENST00000376707 LHX8Q68G74 356 aa25.21■■□□□ 1.63
VSX1-201ENST00000376707 GIMAP6Q6P9H5 292 aa25.21■■□□□ 1.63
VSX1-201ENST00000376707 DPP9Q86TI2 863 aa25.21■■□□□ 1.63
VSX1-201ENST00000376707 SHCBP1Q8NEM2 672 aa25.21■■□□□ 1.63
VSX1-201ENST00000376707 NPLOC4Q8TAT6 608 aa25.21■■□□□ 1.63
VSX1-201ENST00000376707 ATG4CQ96DT6 458 aa25.21■■□□□ 1.63
VSX1-201ENST00000376707 PRO3102Q9H379 93 aa25.21■■□□□ 1.63
VSX1-201ENST00000376707 MYH8P13535 1937 aa25.21■■□□□ 1.63
VSX1-201ENST00000376707 GSG1L2A8MUP6 293 aa25.2■■□□□ 1.62
VSX1-201ENST00000376707 STRNO43815 780 aa25.2■■□□□ 1.62
VSX1-201ENST00000376707 ERCC3P19447 782 aa25.2■■□□□ 1.62
VSX1-201ENST00000376707 LRRFIP1Q32MZ4 808 aaKnown RBP25.2■■□□□ 1.62
VSX1-201ENST00000376707 SBK1Q52WX2 424 aa25.2■■□□□ 1.62
VSX1-201ENST00000376707 MINDY4BA8MYZ0 360 aa25.19■■□□□ 1.62
VSX1-201ENST00000376707 RAD21O60216 631 aa25.19■■□□□ 1.62
VSX1-201ENST00000376707 ADORA2AP29274 412 aa25.19■■□□□ 1.62
VSX1-201ENST00000376707 STK11IPQ8N1F8 1099 aa25.19■■□□□ 1.62
VSX1-201ENST00000376707 MROH8Q9H579 483 aa25.19■■□□□ 1.62
VSX1-201ENST00000376707 MKNK2Q9HBH9 465 aa25.19■■□□□ 1.62
VSX1-201ENST00000376707 GOPCQ9HD26 462 aa25.19■■□□□ 1.62
VSX1-201ENST00000376707 TRIOBPQ9H2D6 2365 aa25.18■■□□□ 1.62
VSX1-201ENST00000376707 TTC41PQ6P2S7 1318 aa25.18■■□□□ 1.62
VSX1-201ENST00000376707 ERC2O15083 957 aa25.18■■□□□ 1.62
VSX1-201ENST00000376707 GPAA1O43292 621 aa25.18■■□□□ 1.62
VSX1-201ENST00000376707 GNAT2P19087 354 aa25.18■■□□□ 1.62
VSX1-201ENST00000376707 CNGA1P29973 690 aa25.18■■□□□ 1.62
VSX1-201ENST00000376707 CYP2C19P33261 490 aa25.18■■□□□ 1.62
VSX1-201ENST00000376707 NCAPG2Q86XI2 1143 aa25.18■■□□□ 1.62
VSX1-201ENST00000376707 PFASO15067 1338 aa25.17■■□□□ 1.62
VSX1-201ENST00000376707 TDO2P48775 406 aa25.17■■□□□ 1.62
VSX1-201ENST00000376707 SLC5A4Q9NY91 659 aa25.17■■□□□ 1.62
VSX1-201ENST00000376707 STAP2Q9UGK3 403 aa25.17■■□□□ 1.62
VSX1-201ENST00000376707 DDX20Q9UHI6 824 aaKnown RBP25.17■■□□□ 1.62
VSX1-201ENST00000376707 ZMYND8Q9ULU4 1186 aaPredicted RBP25.17■■□□□ 1.62
VSX1-201ENST00000376707 A0A0G2JMZ2 1700 aa25.17■■□□□ 1.62
VSX1-201ENST00000376707 MSCO60682 206 aa25.16■■□□□ 1.62
VSX1-201ENST00000376707 APPP05067 770 aa25.16■■□□□ 1.62
VSX1-201ENST00000376707 RASA1P20936 1047 aa25.16■■□□□ 1.62
VSX1-201ENST00000376707 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.16■■□□□ 1.62
VSX1-201ENST00000376707 ROBO3Q96MS0 1386 aa25.16■■□□□ 1.62
VSX1-201ENST00000376707 A0A1W2PPC1 479 aa25.15■■□□□ 1.62
VSX1-201ENST00000376707 M0R2C6 588 aa25.15■■□□□ 1.62
VSX1-201ENST00000376707 COL6A1P12109 1028 aa25.15■■□□□ 1.62
VSX1-201ENST00000376707 OLFML2BQ68BL8 750 aa25.15■■□□□ 1.62
VSX1-201ENST00000376707 EPB41L4AQ9HCS5 686 aaPredicted RBP25.15■■□□□ 1.62
VSX1-201ENST00000376707 FBXO28Q9NVF7 368 aa25.15■■□□□ 1.62
VSX1-201ENST00000376707 RLFQ13129 1914 aa25.15■■□□□ 1.62
VSX1-201ENST00000376707 ALPK3Q96L96 1907 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms