RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 SYNRGQ9UMZ2 1314 aa14.09□□□□□ -0.15
TNFSF13B-201ENST00000375887 BAZ2AQ9UIF9 1905 aaKnown RBP14.09□□□□□ -0.15
TNFSF13B-201ENST00000375887 FXR1P51114 621 aaKnown RBP eCLIP14.09□□□□□ -0.15
TNFSF13B-201ENST00000375887 CTR9Q6PD62 1173 aa14.09□□□□□ -0.15
TNFSF13B-201ENST00000375887 SLC51AQ86UW1 340 aa14.09□□□□□ -0.15
TNFSF13B-201ENST00000375887 ZSWIM4Q9H7M6 989 aa14.09□□□□□ -0.15
TNFSF13B-201ENST00000375887 RTL9Q8NET4 1388 aa14.09□□□□□ -0.15
TNFSF13B-201ENST00000375887 USP17L12C9JPN9 530 aa14.09□□□□□ -0.15
TNFSF13B-201ENST00000375887 USP17L21D6R901 530 aa14.09□□□□□ -0.15
TNFSF13B-201ENST00000375887 TFRCP02786 760 aaKnown RBP14.09□□□□□ -0.15
TNFSF13B-201ENST00000375887 XBP1P17861 261 aa14.09□□□□□ -0.15
TNFSF13B-201ENST00000375887 GTF2E1P29083 439 aaPredicted RBP14.09□□□□□ -0.15
TNFSF13B-201ENST00000375887 CASP14P31944 242 aa14.09□□□□□ -0.15
TNFSF13B-201ENST00000375887 PPP2R5BQ15173 497 aa14.09□□□□□ -0.15
TNFSF13B-201ENST00000375887 CCDC12Q8WUD4 166 aaPredicted RBP14.09□□□□□ -0.15
TNFSF13B-201ENST00000375887 GSDMAQ96QA5 445 aa14.09□□□□□ -0.15
TNFSF13B-201ENST00000375887 NOL10Q9BSC4 688 aaKnown RBP14.09□□□□□ -0.15
TNFSF13B-201ENST00000375887 PARD6BQ9BYG5 372 aa14.09□□□□□ -0.15
TNFSF13B-201ENST00000375887 ARGLU1Q9NWB6 273 aaPredicted RBP14.09□□□□□ -0.15
TNFSF13B-201ENST00000375887 GYPCP04921 128 aa14.08□□□□□ -0.16
TNFSF13B-201ENST00000375887 CCDC175P0C221 793 aa14.08□□□□□ -0.16
TNFSF13B-201ENST00000375887 KLRK1P26718 216 aa14.08□□□□□ -0.16
TNFSF13B-201ENST00000375887 CDC25AP30304 524 aa14.08□□□□□ -0.16
TNFSF13B-201ENST00000375887 E2F4Q16254 413 aa14.08□□□□□ -0.16
TNFSF13B-201ENST00000375887 PARP10Q53GL7 1025 aa14.08□□□□□ -0.16
TNFSF13B-201ENST00000375887 TTC38Q5R3I4 469 aa14.08□□□□□ -0.16
TNFSF13B-201ENST00000375887 CC2D1AQ6P1N0 951 aaPredicted RBP14.08□□□□□ -0.16
TNFSF13B-201ENST00000375887 TMTC3Q6ZXV5 915 aa14.08□□□□□ -0.16
TNFSF13B-201ENST00000375887 FERMT2Q96AC1 680 aa14.08□□□□□ -0.16
TNFSF13B-201ENST00000375887 ZCCHC17Q9NP64 241 aaKnown RBP14.08□□□□□ -0.16
TNFSF13B-201ENST00000375887 LOC102724428A0A0B4J2F2 783 aa14.08□□□□□ -0.16
TNFSF13B-201ENST00000375887 ERICH4A6NGS2 130 aa14.08□□□□□ -0.16
TNFSF13B-201ENST00000375887 FGRP09769 529 aa14.08□□□□□ -0.16
TNFSF13B-201ENST00000375887 CCT6AP40227 531 aaKnown RBP14.08□□□□□ -0.16
TNFSF13B-201ENST00000375887 SIK1P57059 783 aa14.08□□□□□ -0.16
TNFSF13B-201ENST00000375887 FAM47AQ5JRC9 791 aa14.08□□□□□ -0.16
TNFSF13B-201ENST00000375887 GPR161Q8N6U8 529 aaKnown RBP14.08□□□□□ -0.16
TNFSF13B-201ENST00000375887 FAM84BQ96KN1 310 aaPredicted RBP14.08□□□□□ -0.16
TNFSF13B-201ENST00000375887 CICQ96RK0 1608 aaPredicted RBP14.08□□□□□ -0.16
TNFSF13B-201ENST00000375887 MYH14Q7Z406 1995 aaKnown RBP14.07□□□□□ -0.16
TNFSF13B-201ENST00000375887 MFAP3LO75121 409 aa14.07□□□□□ -0.16
TNFSF13B-201ENST00000375887 ADAMTS2O95450 1211 aa14.07□□□□□ -0.16
TNFSF13B-201ENST00000375887 ATP2C1P98194 919 aaPredicted RBP14.07□□□□□ -0.16
TNFSF13B-201ENST00000375887 PPFIBP1Q86W92 1011 aa14.07□□□□□ -0.16
TNFSF13B-201ENST00000375887 UBXN6Q9BZV1 441 aa14.07□□□□□ -0.16
TNFSF13B-201ENST00000375887 CTNND2Q9UQB3 1225 aa14.07□□□□□ -0.16
TNFSF13B-201ENST00000375887 MTMR7Q9Y216 660 aa14.07□□□□□ -0.16
TNFSF13B-201ENST00000375887 TAF1P21675 1872 aa14.07□□□□□ -0.16
TNFSF13B-201ENST00000375887 CNTNAP5Q8WYK1 1306 aa14.07□□□□□ -0.16
TNFSF13B-201ENST00000375887 CACNA1SQ13698 1873 aa14.07□□□□□ -0.16
TNFSF13B-201ENST00000375887 POLR3GO15318 223 aaPredicted RBP14.07□□□□□ -0.16
TNFSF13B-201ENST00000375887 PDE4CQ08493 712 aa14.07□□□□□ -0.16
TNFSF13B-201ENST00000375887 ERFEQ4G0M1 354 aa14.07□□□□□ -0.16
TNFSF13B-201ENST00000375887 PIK3AP1Q6ZUJ8 805 aa14.07□□□□□ -0.16
TNFSF13B-201ENST00000375887 IQCA1Q86XH1 822 aa14.07□□□□□ -0.16
TNFSF13B-201ENST00000375887 BRIP1Q9BX63 1249 aa14.07□□□□□ -0.16
TNFSF13B-201ENST00000375887 PLCH1Q4KWH8 1693 aa14.07□□□□□ -0.16
TNFSF13B-201ENST00000375887 CYP2D6P10635 497 aa14.06□□□□□ -0.16
TNFSF13B-201ENST00000375887 MCM7P33993 719 aa14.06□□□□□ -0.16
TNFSF13B-201ENST00000375887 KRT31Q15323 416 aa14.06□□□□□ -0.16
TNFSF13B-201ENST00000375887 PDXDC2PQ6P474 469 aa14.06□□□□□ -0.16
TNFSF13B-201ENST00000375887 TPM1P09493 284 aa14.06□□□□□ -0.16
TNFSF13B-201ENST00000375887 CT47A1Q5JQC4 288 aaPredicted RBP14.06□□□□□ -0.16
TNFSF13B-201ENST00000375887 RASGRP2Q7LDG7 609 aa14.06□□□□□ -0.16
TNFSF13B-201ENST00000375887 ACRBPQ8NEB7 543 aa14.06□□□□□ -0.16
TNFSF13B-201ENST00000375887 RBM28Q9NW13 759 aaKnown RBP14.06□□□□□ -0.16
TNFSF13B-201ENST00000375887 MINPP1Q9UNW1 487 aa14.06□□□□□ -0.16
TNFSF13B-201ENST00000375887 MAPK8IP1Q9UQF2 711 aa14.06□□□□□ -0.16
TNFSF13B-201ENST00000375887 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.06□□□□□ -0.16
TNFSF13B-201ENST00000375887 DUOX1Q9NRD9 1551 aa14.05□□□□□ -0.16
TNFSF13B-201ENST00000375887 ERVK-24P63145 666 aa14.05□□□□□ -0.16
TNFSF13B-201ENST00000375887 RABGGTAQ92696 567 aa14.05□□□□□ -0.16
TNFSF13B-201ENST00000375887 CCDC34Q96HJ3 373 aa14.05□□□□□ -0.16
TNFSF13B-201ENST00000375887 CDC5LQ99459 802 aaKnown RBP14.05□□□□□ -0.16
TNFSF13B-201ENST00000375887 LRRC10BA6NIK2 292 aa14.05□□□□□ -0.16
TNFSF13B-201ENST00000375887 RRAGBQ5VZM2 374 aa14.05□□□□□ -0.16
TNFSF13B-201ENST00000375887 ANKRD18AQ8IVF6 992 aa14.05□□□□□ -0.16
TNFSF13B-201ENST00000375887 CELF1Q92879 486 aaKnown RBP14.05□□□□□ -0.16
TNFSF13B-201ENST00000375887 FUT8Q9BYC5 575 aa14.05□□□□□ -0.16
TNFSF13B-201ENST00000375887 VPS16Q9H269 839 aa14.05□□□□□ -0.16
TNFSF13B-201ENST00000375887 GNL3LQ9NVN8 582 aaKnown RBP14.05□□□□□ -0.16
TNFSF13B-201ENST00000375887 PUF60Q9UHX1 559 aaKnown RBP14.05□□□□□ -0.16
TNFSF13B-201ENST00000375887 KCNQ2O43526 872 aa14.04□□□□□ -0.16
TNFSF13B-201ENST00000375887 CYP2C19P33261 490 aa14.04□□□□□ -0.16
TNFSF13B-201ENST00000375887 UBE4AQ14139 1066 aa14.04□□□□□ -0.16
TNFSF13B-201ENST00000375887 ZNF569Q5MCW4 686 aa14.04□□□□□ -0.16
TNFSF13B-201ENST00000375887 NSUN4Q96CB9 384 aaKnown RBP14.04□□□□□ -0.16
TNFSF13B-201ENST00000375887 DCP1AQ9NPI6 582 aaPredicted RBP14.04□□□□□ -0.16
TNFSF13B-201ENST00000375887 TFCP2L1Q9NZI6 479 aa14.04□□□□□ -0.16
TNFSF13B-201ENST00000375887 GDAQ9Y2T3 454 aa14.04□□□□□ -0.16
TNFSF13B-201ENST00000375887 SEMA3EO15041 775 aa14.04□□□□□ -0.16
TNFSF13B-201ENST00000375887 N4BP3O15049 544 aa14.04□□□□□ -0.16
TNFSF13B-201ENST00000375887 DDAH1O94760 285 aa14.04□□□□□ -0.16
TNFSF13B-201ENST00000375887 BMP15O95972 392 aa14.04□□□□□ -0.16
TNFSF13B-201ENST00000375887 SCG2P13521 617 aa14.04□□□□□ -0.16
TNFSF13B-201ENST00000375887 NLRP5P59047 1200 aa14.04□□□□□ -0.16
TNFSF13B-201ENST00000375887 MECOMQ03112 1051 aa14.04□□□□□ -0.16
TNFSF13B-201ENST00000375887 IQUBQ8NA54 791 aa14.04□□□□□ -0.16
TNFSF13B-201ENST00000375887 CTAGE1Q96RT6 745 aa14.04□□□□□ -0.16
TNFSF13B-201ENST00000375887 NAA15Q9BXJ9 866 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms