RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 PPP4CP60510 307 aa15.98■□□□□ 0.15
MSH5-202ENST00000375740 TGFBRAP1Q8WUH2 860 aa15.98■□□□□ 0.15
MSH5-202ENST00000375740 SRPRBQ9Y5M8 271 aaKnown RBP15.98■□□□□ 0.15
MSH5-202ENST00000375740 LDHCP07864 332 aa15.97■□□□□ 0.15
MSH5-202ENST00000375740 NCAPHQ15003 741 aa15.97■□□□□ 0.15
MSH5-202ENST00000375740 SLC27A3Q5K4L6 730 aa15.97■□□□□ 0.15
MSH5-202ENST00000375740 IL17RBQ9NRM6 502 aa15.97■□□□□ 0.15
MSH5-202ENST00000375740 TRMT1Q9NXH9 659 aaKnown RBP15.97■□□□□ 0.15
MSH5-202ENST00000375740 GGA1Q9UJY5 639 aa15.97■□□□□ 0.15
MSH5-202ENST00000375740 FOXN1O15353 648 aa15.97■□□□□ 0.15
MSH5-202ENST00000375740 TRIM37O94972 964 aa15.97■□□□□ 0.15
MSH5-202ENST00000375740 ZNF579Q8NAF0 562 aaKnown RBP15.97■□□□□ 0.15
MSH5-202ENST00000375740 NOL10Q9BSC4 688 aaKnown RBP15.97■□□□□ 0.15
MSH5-202ENST00000375740 TRIM75PA6NK02 468 aa15.96■□□□□ 0.15
MSH5-202ENST00000375740 POLR2DO15514 142 aaKnown RBP15.96■□□□□ 0.15
MSH5-202ENST00000375740 MDM2Q00987 491 aaPredicted RBP15.96■□□□□ 0.15
MSH5-202ENST00000375740 MKNK2Q9HBH9 465 aa15.96■□□□□ 0.15
MSH5-202ENST00000375740 PCDHA5Q9Y5H7 936 aa15.96■□□□□ 0.15
MSH5-202ENST00000375740 BBOX1O75936 387 aa15.96■□□□□ 0.15
MSH5-202ENST00000375740 DDR1Q08345 913 aa15.96■□□□□ 0.15
MSH5-202ENST00000375740 NPY5RQ15761 445 aa15.96■□□□□ 0.15
MSH5-202ENST00000375740 NOM1Q5C9Z4 860 aaKnown RBP15.96■□□□□ 0.15
MSH5-202ENST00000375740 CSRNP2Q9H175 543 aa15.96■□□□□ 0.15
MSH5-202ENST00000375740 KAT14Q9H8E8 782 aa15.96■□□□□ 0.15
MSH5-202ENST00000375740 TULP2O00295 520 aa15.95■□□□□ 0.14
MSH5-202ENST00000375740 IL1R1P14778 569 aa15.95■□□□□ 0.14
MSH5-202ENST00000375740 USP49Q70CQ1 688 aa15.95■□□□□ 0.14
MSH5-202ENST00000375740 DGKHQ86XP1 1220 aa15.95■□□□□ 0.14
MSH5-202ENST00000375740 MAPKAPK5Q8IW41 473 aa15.95■□□□□ 0.14
MSH5-202ENST00000375740 LRRC8AQ8IWT6 810 aa15.95■□□□□ 0.14
MSH5-202ENST00000375740 TNFRSF25Q93038 417 aa15.95■□□□□ 0.14
MSH5-202ENST00000375740 RTFDC1Q9BY42 306 aaPredicted RBP15.95■□□□□ 0.14
MSH5-202ENST00000375740 SAP30BPQ9UHR5 308 aaKnown RBP15.95■□□□□ 0.14
MSH5-202ENST00000375740 SERTAD1Q9UHV2 236 aa15.95■□□□□ 0.14
MSH5-202ENST00000375740 BAZ2BQ9UIF8 2168 aaKnown RBP15.95■□□□□ 0.14
MSH5-202ENST00000375740 VEGFAP15692 232 aaPredicted RBP15.95■□□□□ 0.14
MSH5-202ENST00000375740 PLCD1P51178 756 aa15.95■□□□□ 0.14
MSH5-202ENST00000375740 FILIP1Q7Z7B0 1213 aa15.95■□□□□ 0.14
MSH5-202ENST00000375740 ELOA2Q8IYF1 753 aaPredicted RBP15.95■□□□□ 0.14
MSH5-202ENST00000375740 LRRN4CLQ8ND94 238 aa15.95■□□□□ 0.14
MSH5-202ENST00000375740 BRMS1Q9HCU9 246 aa15.95■□□□□ 0.14
MSH5-202ENST00000375740 POLLQ9UGP5 575 aa15.95■□□□□ 0.14
MSH5-202ENST00000375740 USP17L3A6NCW0 530 aa15.94■□□□□ 0.14
MSH5-202ENST00000375740 USP17L4A6NCW7 530 aa15.94■□□□□ 0.14
MSH5-202ENST00000375740 WNT7AO00755 349 aa15.94■□□□□ 0.14
MSH5-202ENST00000375740 IKBKBO14920 756 aa15.94■□□□□ 0.14
MSH5-202ENST00000375740 SCG2P13521 617 aa15.94■□□□□ 0.14
MSH5-202ENST00000375740 TPM4P67936 248 aa15.94■□□□□ 0.14
MSH5-202ENST00000375740 USP17L1Q7RTZ2 530 aa15.94■□□□□ 0.14
MSH5-202ENST00000375740 AMOTL1Q8IY63 956 aa15.94■□□□□ 0.14
MSH5-202ENST00000375740 IFNKQ9P0W0 207 aa15.94■□□□□ 0.14
MSH5-202ENST00000375740 POLRMTO00411 1230 aaKnown RBP15.94■□□□□ 0.14
MSH5-202ENST00000375740 HOXA10P31260 410 aaPredicted RBP15.94■□□□□ 0.14
MSH5-202ENST00000375740 KIF5BP33176 963 aa15.94■□□□□ 0.14
MSH5-202ENST00000375740 BTDP43251 543 aa15.94■□□□□ 0.14
MSH5-202ENST00000375740 HNRNPH2P55795 449 aaKnown RBP15.94■□□□□ 0.14
MSH5-202ENST00000375740 PFKFB3Q16875 520 aaPredicted RBP15.94■□□□□ 0.14
MSH5-202ENST00000375740 ZNF444Q8N0Y2 327 aaPredicted RBP15.94■□□□□ 0.14
MSH5-202ENST00000375740 PDILTQ8N807 584 aa15.94■□□□□ 0.14
MSH5-202ENST00000375740 SLC44A5Q8NCS7 719 aa15.94■□□□□ 0.14
MSH5-202ENST00000375740 TBC1D16Q8TBP0 767 aa15.94■□□□□ 0.14
MSH5-202ENST00000375740 ANKS1AQ92625 1134 aa15.94■□□□□ 0.14
MSH5-202ENST00000375740 XPO4Q9C0E2 1151 aaKnown RBP15.94■□□□□ 0.14
MSH5-202ENST00000375740 LMOD1P29536 600 aaPredicted RBP15.93■□□□□ 0.14
MSH5-202ENST00000375740 NLRP5P59047 1200 aa15.93■□□□□ 0.14
MSH5-202ENST00000375740 ZNF174Q15697 407 aa15.93■□□□□ 0.14
MSH5-202ENST00000375740 KRT27Q7Z3Y8 459 aa15.93■□□□□ 0.14
MSH5-202ENST00000375740 PNMA1Q8ND90 353 aa15.93■□□□□ 0.14
MSH5-202ENST00000375740 HOOK1Q9UJC3 728 aaKnown RBP15.93■□□□□ 0.14
MSH5-202ENST00000375740 SMC2O95347 1197 aa15.93■□□□□ 0.14
MSH5-202ENST00000375740 POSTNQ15063 836 aa15.93■□□□□ 0.14
MSH5-202ENST00000375740 PTPN14Q15678 1187 aa15.93■□□□□ 0.14
MSH5-202ENST00000375740 OLFM4Q6UX06 510 aa15.93■□□□□ 0.14
MSH5-202ENST00000375740 NYAP1Q6ZVC0 841 aa15.93■□□□□ 0.14
MSH5-202ENST00000375740 PROM2Q8N271 834 aa15.93■□□□□ 0.14
MSH5-202ENST00000375740 CRAMP1Q96RY5 1269 aa15.93■□□□□ 0.14
MSH5-202ENST00000375740 HSD3B7Q9H2F3 369 aa15.93■□□□□ 0.14
MSH5-202ENST00000375740 ROBO3Q96MS0 1386 aa15.93■□□□□ 0.14
MSH5-202ENST00000375740 GPR75-ASB3A0A0A6YYF3 556 aa15.92■□□□□ 0.14
MSH5-202ENST00000375740 C6orf229H3BNL8 230 aa15.92■□□□□ 0.14
MSH5-202ENST00000375740 PRR29P0C7W0 189 aa15.92■□□□□ 0.14
MSH5-202ENST00000375740 TSPY3P0CV98 308 aa15.92■□□□□ 0.14
MSH5-202ENST00000375740 TSPY8P0CW00 308 aa15.92■□□□□ 0.14
MSH5-202ENST00000375740 BMP6P22004 513 aa15.92■□□□□ 0.14
MSH5-202ENST00000375740 STAG2Q8N3U4 1231 aa15.92■□□□□ 0.14
MSH5-202ENST00000375740 ADAMTS3O15072 1205 aa15.92■□□□□ 0.14
MSH5-202ENST00000375740 GRAMD1CQ8IYS0 662 aa15.92■□□□□ 0.14
MSH5-202ENST00000375740 TRIM34Q9BYJ4 488 aa15.92■□□□□ 0.14
MSH5-202ENST00000375740 CALCOCO1Q9P1Z2 691 aa15.92■□□□□ 0.14
MSH5-202ENST00000375740 NT5C2P49902 561 aa15.91■□□□□ 0.14
MSH5-202ENST00000375740 TTC38Q5R3I4 469 aa15.91■□□□□ 0.14
MSH5-202ENST00000375740 MFSD14BQ5SR56 506 aa15.91■□□□□ 0.14
MSH5-202ENST00000375740 CERS3Q8IU89 383 aa15.91■□□□□ 0.14
MSH5-202ENST00000375740 TEX11Q8IYF3 940 aa15.91■□□□□ 0.14
MSH5-202ENST00000375740 EPSTI1Q96J88 318 aa15.91■□□□□ 0.14
MSH5-202ENST00000375740 TCP11L1Q9NUJ3 509 aa15.91■□□□□ 0.14
MSH5-202ENST00000375740 MAN1B1Q9UKM7 699 aa15.91■□□□□ 0.14
MSH5-202ENST00000375740 NAV1Q8NEY1 1877 aa15.91■□□□□ 0.14
MSH5-202ENST00000375740 ACTN4O43707 911 aaKnown RBP15.91■□□□□ 0.14
MSH5-202ENST00000375740 NEMFO60524 1076 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms