RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 BCAMP50895 628 aa18.75■□□□□ 0.59
VARS-215ENST00000375663 DCAF17Q5H9S7 520 aaPredicted RBP18.75■□□□□ 0.59
VARS-215ENST00000375663 RRAGAQ7L523 313 aa18.75■□□□□ 0.59
VARS-215ENST00000375663 FAM71BQ8TC56 605 aa18.75■□□□□ 0.59
VARS-215ENST00000375663 PLVAPQ9BX97 442 aa18.75■□□□□ 0.59
VARS-215ENST00000375663 ANKRD2Q9GZV1 360 aa18.75■□□□□ 0.59
VARS-215ENST00000375663 TFAP4Q01664 338 aa18.75■□□□□ 0.59
VARS-215ENST00000375663 IQCB1Q15051 598 aa18.75■□□□□ 0.59
VARS-215ENST00000375663 ANKS4BQ8N8V4 417 aa18.75■□□□□ 0.59
VARS-215ENST00000375663 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.75■□□□□ 0.59
VARS-215ENST00000375663 TRIM58Q8NG06 486 aa18.75■□□□□ 0.59
VARS-215ENST00000375663 ATG3Q9NT62 314 aa18.75■□□□□ 0.59
VARS-215ENST00000375663 SAP30BPQ9UHR5 308 aaKnown RBP18.75■□□□□ 0.59
VARS-215ENST00000375663 USP42Q9H9J4 1324 aaKnown RBP18.75■□□□□ 0.59
VARS-215ENST00000375663 SLFN14P0C7P3 912 aa18.74■□□□□ 0.59
VARS-215ENST00000375663 RFC4P35249 363 aa18.74■□□□□ 0.59
VARS-215ENST00000375663 UBE4AQ14139 1066 aa18.74■□□□□ 0.59
VARS-215ENST00000375663 CFAP221Q4G0U5 840 aa18.74■□□□□ 0.59
VARS-215ENST00000375663 KRT25Q7Z3Z0 450 aa18.74■□□□□ 0.59
VARS-215ENST00000375663 ZNF804AQ7Z570 1209 aa18.74■□□□□ 0.59
VARS-215ENST00000375663 NLRC4Q9NPP4 1024 aa18.74■□□□□ 0.59
VARS-215ENST00000375663 INCENPQ9NQS7 918 aa18.74■□□□□ 0.59
VARS-215ENST00000375663 ENC1O14682 589 aa18.74■□□□□ 0.59
VARS-215ENST00000375663 MMP1P03956 469 aa18.74■□□□□ 0.59
VARS-215ENST00000375663 PLCG2P16885 1265 aa18.74■□□□□ 0.59
VARS-215ENST00000375663 PAK2Q13177 524 aa18.74■□□□□ 0.59
VARS-215ENST00000375663 RGS22Q8NE09 1264 aa18.74■□□□□ 0.59
VARS-215ENST00000375663 NSRP1Q9H0G5 558 aaKnown RBP18.74■□□□□ 0.59
VARS-215ENST00000375663 ZSWIM5Q9P217 1185 aa18.74■□□□□ 0.59
VARS-215ENST00000375663 PTPRMP28827 1452 aa18.74■□□□□ 0.59
VARS-215ENST00000375663 ERBB3P21860 1342 aa18.74■□□□□ 0.59
VARS-215ENST00000375663 RPN1P04843 607 aaKnown RBP18.74■□□□□ 0.59
VARS-215ENST00000375663 BLIDQ8IZY5 108 aa18.74■□□□□ 0.59
VARS-215ENST00000375663 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.74■□□□□ 0.592e-6■■■■■ 50.3
VARS-215ENST00000375663 LMTK2Q8IWU2 1503 aa18.74■□□□□ 0.59
VARS-215ENST00000375663 MSL1Q68DK7 614 aa18.73■□□□□ 0.59
VARS-215ENST00000375663 HS2ST1Q7LGA3 356 aa18.73■□□□□ 0.59
VARS-215ENST00000375663 DHX40Q8IX18 779 aaKnown RBP18.73■□□□□ 0.59
VARS-215ENST00000375663 SETD1BQ9UPS6 1966 aaKnown RBP18.73■□□□□ 0.59
VARS-215ENST00000375663 AK9Q5TCS8 1911 aa18.73■□□□□ 0.59
VARS-215ENST00000375663 SNX29Q8TEQ0 813 aa18.73■□□□□ 0.59
VARS-215ENST00000375663 HINFPQ9BQA5 517 aa18.73■□□□□ 0.59
VARS-215ENST00000375663 RNF26Q9BY78 433 aaPredicted RBP18.73■□□□□ 0.59
VARS-215ENST00000375663 SCG2P13521 617 aa18.73■□□□□ 0.59
VARS-215ENST00000375663 POTEDQ86YR6 584 aa18.73■□□□□ 0.59
VARS-215ENST00000375663 KLHL7Q8IXQ5 586 aa18.73■□□□□ 0.59
VARS-215ENST00000375663 ACRBPQ8NEB7 543 aa18.73■□□□□ 0.59
VARS-215ENST00000375663 NYXQ9GZU5 481 aa18.73■□□□□ 0.59
VARS-215ENST00000375663 SAMM50Q9Y512 469 aa18.73■□□□□ 0.59
VARS-215ENST00000375663 MORC2Q9Y6X9 1032 aaPredicted RBP18.73■□□□□ 0.59
VARS-215ENST00000375663 KIAA1210Q9ULL0 1709 aa18.73■□□□□ 0.59
VARS-215ENST00000375663 EZRP15311 586 aaKnown RBP18.73■□□□□ 0.59
VARS-215ENST00000375663 PPARDQ03181 441 aa18.73■□□□□ 0.59
VARS-215ENST00000375663 EHMT1Q9H9B1 1298 aa18.73■□□□□ 0.59
VARS-215ENST00000375663 BTG4Q9NY30 223 aa18.73■□□□□ 0.59
VARS-215ENST00000375663 PCDHB6Q9Y5E3 794 aa18.73■□□□□ 0.59
VARS-215ENST00000375663 TMEM232C9JQI7 657 aa18.72■□□□□ 0.59
VARS-215ENST00000375663 CETN3O15182 167 aa18.72■□□□□ 0.59
VARS-215ENST00000375663 VWA3BQ502W6 1294 aa18.72■□□□□ 0.59
VARS-215ENST00000375663 CCDC26Q8TAB7 109 aa18.72■□□□□ 0.59
VARS-215ENST00000375663 PLEKHA4Q9H4M7 779 aa18.72■□□□□ 0.59
VARS-215ENST00000375663 TFCP2L1Q9NZI6 479 aa18.72■□□□□ 0.59
VARS-215ENST00000375663 FAN1Q9Y2M0 1017 aa18.72■□□□□ 0.59
VARS-215ENST00000375663 PPRC1Q5VV67 1664 aaKnown RBP18.72■□□□□ 0.59
VARS-215ENST00000375663 H7C1W4 665 aa18.72■□□□□ 0.59
VARS-215ENST00000375663 MRPL12P52815 198 aaKnown RBP18.72■□□□□ 0.59
VARS-215ENST00000375663 NGLY1Q96IV0 654 aa18.72■□□□□ 0.59
VARS-215ENST00000375663 MYO1AQ9UBC5 1043 aa18.72■□□□□ 0.59
VARS-215ENST00000375663 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.72■□□□□ 0.59
VARS-215ENST00000375663 KIF4AO95239 1232 aa18.72■□□□□ 0.59
VARS-215ENST00000375663 ACTN2P35609 894 aa18.72■□□□□ 0.59
VARS-215ENST00000375663 HNRNPH2P55795 449 aaKnown RBP18.72■□□□□ 0.59
VARS-215ENST00000375663 TEX11Q8IYF3 940 aa18.72■□□□□ 0.59
VARS-215ENST00000375663 CEP104O60308 925 aa18.71■□□□□ 0.59
VARS-215ENST00000375663 RPL13P26373 211 aaKnown RBP18.71■□□□□ 0.59
VARS-215ENST00000375663 IRX3P78415 501 aaPredicted RBP18.71■□□□□ 0.59
VARS-215ENST00000375663 STOX1Q6ZVD7 989 aa18.71■□□□□ 0.59
VARS-215ENST00000375663 BPIFA3Q9BQP9 254 aa18.71■□□□□ 0.59
VARS-215ENST00000375663 FAM204AQ9H8W3 233 aa18.71■□□□□ 0.59
VARS-215ENST00000375663 LIFRP42702 1097 aa18.71■□□□□ 0.59
VARS-215ENST00000375663 INF2Q27J81 1249 aa18.71■□□□□ 0.59
VARS-215ENST00000375663 HERC4Q5GLZ8 1057 aaPredicted RBP18.71■□□□□ 0.59
VARS-215ENST00000375663 SPDYE3A6NKU9 549 aa18.71■□□□□ 0.59
VARS-215ENST00000375663 TMEM110-MUSTN1A8MSY1 372 aa18.71■□□□□ 0.59
VARS-215ENST00000375663 KLHL30Q0D2K2 578 aa18.71■□□□□ 0.59
VARS-215ENST00000375663 EXOC4Q96A65 974 aa18.71■□□□□ 0.59
VARS-215ENST00000375663 LRRC45Q96CN5 670 aa18.71■□□□□ 0.59
VARS-215ENST00000375663 GYG1P46976 350 aa18.7■□□□□ 0.58
VARS-215ENST00000375663 HOOK3Q86VS8 718 aa18.7■□□□□ 0.58
VARS-215ENST00000375663 BCAS4Q8TDM0 211 aa18.7■□□□□ 0.58
VARS-215ENST00000375663 ANKRD7Q92527 254 aa18.7■□□□□ 0.58
VARS-215ENST00000375663 SCLT1Q96NL6 688 aa18.7■□□□□ 0.58
VARS-215ENST00000375663 SRPRBQ9Y5M8 271 aaKnown RBP18.7■□□□□ 0.58
VARS-215ENST00000375663 ASIC2Q16515 512 aa18.7■□□□□ 0.58
VARS-215ENST00000375663 ARMCX5Q6P1M9 558 aa18.7■□□□□ 0.58
VARS-215ENST00000375663 GPCPD1Q9NPB8 672 aa18.7■□□□□ 0.58
VARS-215ENST00000375663 ZNF219Q9P2Y4 722 aaPredicted RBP18.7■□□□□ 0.58
VARS-215ENST00000375663 TSKSQ9UJT2 592 aa18.7■□□□□ 0.58
VARS-215ENST00000375663 FAM13AO94988 1023 aa18.7■□□□□ 0.58
VARS-215ENST00000375663 GNGT1P63211 74 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms