RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 PTPN21Q16825 1174 aa16.32■□□□□ 0.2
NOTCH4-201ENST00000375023 RRAGAQ7L523 313 aa16.32■□□□□ 0.2
NOTCH4-201ENST00000375023 UBL4BQ8N7F7 174 aa16.32■□□□□ 0.2
NOTCH4-201ENST00000375023 TTF2Q9UNY4 1162 aaKnown RBP16.31■□□□□ 0.2
NOTCH4-201ENST00000375023 TACC3Q9Y6A5 838 aa16.31■□□□□ 0.2
NOTCH4-201ENST00000375023 ALAS1P13196 640 aa16.31■□□□□ 0.2
NOTCH4-201ENST00000375023 ARHGEF16Q5VV41 709 aa16.31■□□□□ 0.2
NOTCH4-201ENST00000375023 GPKOWQ92917 476 aaPredicted RBP eCLIP16.31■□□□□ 0.2
NOTCH4-201ENST00000375023 ZBTB7BO15156 539 aaPredicted RBP16.31■□□□□ 0.2
NOTCH4-201ENST00000375023 SECISBP2LQ93073 1101 aaKnown RBP16.31■□□□□ 0.2
NOTCH4-201ENST00000375023 MKRN1Q9UHC7 482 aaKnown RBP16.31■□□□□ 0.2
NOTCH4-201ENST00000375023 LSM14BQ9BX40 385 aaKnown RBP16.31■□□□□ 0.2
NOTCH4-201ENST00000375023 YTHDC2Q9H6S0 1430 aaKnown RBP16.31■□□□□ 0.2
NOTCH4-201ENST00000375023 VPS37BQ9H9H4 285 aa16.31■□□□□ 0.2
NOTCH4-201ENST00000375023 BUB1O43683 1085 aa16.31■□□□□ 0.2
NOTCH4-201ENST00000375023 ABI1Q8IZP0 508 aa16.31■□□□□ 0.2
NOTCH4-201ENST00000375023 YARSP54577 528 aaKnown RBP16.3■□□□□ 0.2
NOTCH4-201ENST00000375023 KIAA0825Q8IV33 1275 aa16.3■□□□□ 0.2
NOTCH4-201ENST00000375023 AFAP1L1Q8TED9 768 aa16.3■□□□□ 0.2
NOTCH4-201ENST00000375023 APPBP2Q92624 585 aa16.3■□□□□ 0.2
NOTCH4-201ENST00000375023 RILPL1Q5EBL4 403 aa16.3■□□□□ 0.2
NOTCH4-201ENST00000375023 RYBPQ8N488 228 aaPredicted RBP16.3■□□□□ 0.2
NOTCH4-201ENST00000375023 STK10O94804 968 aaKnown RBP16.3■□□□□ 0.2
NOTCH4-201ENST00000375023 NEDD9Q14511 834 aa16.3■□□□□ 0.2
NOTCH4-201ENST00000375023 ARHGEF6Q15052 776 aa16.3■□□□□ 0.2
NOTCH4-201ENST00000375023 POSTNQ15063 836 aa16.3■□□□□ 0.2
NOTCH4-201ENST00000375023 NONOQ15233 471 aaKnown RBP eCLIP16.3■□□□□ 0.2
NOTCH4-201ENST00000375023 PRR16Q569H4 304 aa16.3■□□□□ 0.2
NOTCH4-201ENST00000375023 GIPC1O14908 333 aa16.3■□□□□ 0.2
NOTCH4-201ENST00000375023 KLHL30Q0D2K2 578 aa16.3■□□□□ 0.2
NOTCH4-201ENST00000375023 CCDC89Q8N998 374 aa16.3■□□□□ 0.2
NOTCH4-201ENST00000375023 NOX5Q96PH1 765 aa16.3■□□□□ 0.2
NOTCH4-201ENST00000375023 RIOK1Q9BRS2 568 aaKnown RBP16.3■□□□□ 0.2
NOTCH4-201ENST00000375023 SUGCTQ9HAC7 445 aa16.3■□□□□ 0.2
NOTCH4-201ENST00000375023 SERTAD1Q9UHV2 236 aa16.3■□□□□ 0.2
NOTCH4-201ENST00000375023 EXOC7Q9UPT5 735 aa16.3■□□□□ 0.2
NOTCH4-201ENST00000375023 FYB2Q5VWT5 728 aa16.3■□□□□ 0.2
NOTCH4-201ENST00000375023 KAZNQ674X7 775 aa16.3■□□□□ 0.2
NOTCH4-201ENST00000375023 MAP10Q9P2G4 905 aa16.3■□□□□ 0.2
NOTCH4-201ENST00000375023 KCNQ3O43525 872 aa16.29■□□□□ 0.2
NOTCH4-201ENST00000375023 KRT15P19012 456 aa16.29■□□□□ 0.2
NOTCH4-201ENST00000375023 U2AF1L4Q8WU68 220 aaKnown RBP16.29■□□□□ 0.2
NOTCH4-201ENST00000375023 SUDS3Q9H7L9 328 aaPredicted RBP16.29■□□□□ 0.2
NOTCH4-201ENST00000375023 URB2Q14146 1524 aaKnown RBP16.29■□□□□ 0.2
NOTCH4-201ENST00000375023 SYCP2Q9BX26 1530 aa16.29■□□□□ 0.2
NOTCH4-201ENST00000375023 STK38LQ9Y2H1 464 aa16.29■□□□□ 0.2
NOTCH4-201ENST00000375023 SMCO2A6NFE2 343 aa16.29■□□□□ 0.2
NOTCH4-201ENST00000375023 KRT40Q6A162 431 aa16.29■□□□□ 0.2
NOTCH4-201ENST00000375023 MLXIPQ9HAP2 919 aa16.29■□□□□ 0.2
NOTCH4-201ENST00000375023 LACTBP83111 547 aaPredicted RBP16.29■□□□□ 0.2
NOTCH4-201ENST00000375023 BZW2Q9Y6E2 419 aaKnown RBP16.29■□□□□ 0.2
NOTCH4-201ENST00000375023 ZNF608Q9ULD9 1512 aaPredicted RBP16.29■□□□□ 0.2
NOTCH4-201ENST00000375023 NR1I2O75469 434 aa16.29■□□□□ 0.2
NOTCH4-201ENST00000375023 HHATQ5VTY9 493 aa16.29■□□□□ 0.2
NOTCH4-201ENST00000375023 TMEM87BQ96K49 555 aa16.29■□□□□ 0.2
NOTCH4-201ENST00000375023 CARD10Q9BWT7 1032 aa16.29■□□□□ 0.2
NOTCH4-201ENST00000375023 SLC5A4Q9NY91 659 aa16.29■□□□□ 0.2
NOTCH4-201ENST00000375023 DNM2P50570 870 aa16.28■□□□□ 0.2
NOTCH4-201ENST00000375023 BCAMP50895 628 aa16.28■□□□□ 0.2
NOTCH4-201ENST00000375023 PPP2R5AQ15172 486 aa16.28■□□□□ 0.2
NOTCH4-201ENST00000375023 RILPQ96NA2 401 aa16.28■□□□□ 0.2
NOTCH4-201ENST00000375023 MOSPD1Q9UJG1 213 aa16.28■□□□□ 0.2
NOTCH4-201ENST00000375023 DLATP10515 647 aaKnown RBP16.28■□□□□ 0.2
NOTCH4-201ENST00000375023 CTAGE3PQ8IX95 158 aa16.28■□□□□ 0.2
NOTCH4-201ENST00000375023 UBN2Q6ZU65 1347 aa16.28■□□□□ 0.2
NOTCH4-201ENST00000375023 IFNB1P01574 187 aa16.28■□□□□ 0.2
NOTCH4-201ENST00000375023 CSRNP2Q9H175 543 aa16.28■□□□□ 0.2
NOTCH4-201ENST00000375023 SLC52A2Q9HAB3 445 aa16.28■□□□□ 0.2
NOTCH4-201ENST00000375023 ANKFY1Q9P2R3 1169 aa16.28■□□□□ 0.2
NOTCH4-201ENST00000375023 NXNQ6DKJ4 435 aa16.28■□□□□ 0.2
NOTCH4-201ENST00000375023 CDAN1Q8IWY9 1227 aa16.28■□□□□ 0.2
NOTCH4-201ENST00000375023 SKA2Q8WVK7 121 aaPredicted RBP16.28■□□□□ 0.2
NOTCH4-201ENST00000375023 PALM3A6NDB9 673 aaPredicted RBP16.28■□□□□ 0.2
NOTCH4-201ENST00000375023 BNIP3LO60238 219 aa16.28■□□□□ 0.2
NOTCH4-201ENST00000375023 ATP11AP98196 1134 aa16.28■□□□□ 0.2
NOTCH4-201ENST00000375023 FOXD4Q12950 439 aaPredicted RBP16.28■□□□□ 0.2
NOTCH4-201ENST00000375023 ZNF772Q68DY9 489 aaPredicted RBP16.28■□□□□ 0.2
NOTCH4-201ENST00000375023 NFE2L3Q9Y4A8 694 aa16.28■□□□□ 0.2
NOTCH4-201ENST00000375023 SLC9C1Q4G0N8 1177 aa16.27■□□□□ 0.2
NOTCH4-201ENST00000375023 MFSD14BQ5SR56 506 aa16.27■□□□□ 0.2
NOTCH4-201ENST00000375023 SPICE1Q8N0Z3 855 aa16.27■□□□□ 0.2
NOTCH4-201ENST00000375023 GAS7O60861 476 aa16.27■□□□□ 0.2
NOTCH4-201ENST00000375023 SLC4A1P02730 911 aa16.27■□□□□ 0.2
NOTCH4-201ENST00000375023 PCK1P35558 622 aa16.27■□□□□ 0.2
NOTCH4-201ENST00000375023 ZNF827Q17R98 1081 aa16.27■□□□□ 0.2
NOTCH4-201ENST00000375023 WDR66Q8TBY9 1149 aa16.27■□□□□ 0.2
NOTCH4-201ENST00000375023 DESI2Q9BSY9 194 aa16.27■□□□□ 0.2
NOTCH4-201ENST00000375023 RNASELQ05823 741 aaKnown RBP16.27■□□□□ 0.2
NOTCH4-201ENST00000375023 PPME1Q9Y570 386 aa16.27■□□□□ 0.2
NOTCH4-201ENST00000375023 E7EWF7 191 aa16.27■□□□□ 0.19
NOTCH4-201ENST00000375023 LLGL1Q15334 1064 aa16.27■□□□□ 0.19
NOTCH4-201ENST00000375023 MIER3Q7Z3K6 550 aa16.27■□□□□ 0.19
NOTCH4-201ENST00000375023 GPBP1Q86WP2 473 aa16.27■□□□□ 0.19
NOTCH4-201ENST00000375023 CCDC125Q86Z20 511 aa16.27■□□□□ 0.19
NOTCH4-201ENST00000375023 SLITRK6Q9H5Y7 841 aa16.27■□□□□ 0.19
NOTCH4-201ENST00000375023 BUB1BO60566 1050 aaPredicted RBP16.27■□□□□ 0.19
NOTCH4-201ENST00000375023 MAGEA1P43355 309 aa16.27■□□□□ 0.19
NOTCH4-201ENST00000375023 KRT81Q14533 505 aa16.27■□□□□ 0.19
NOTCH4-201ENST00000375023 LONRF2Q1L5Z9 754 aa16.27■□□□□ 0.19
NOTCH4-201ENST00000375023 LPIN2Q92539 896 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms