RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 SDR42E1Q8WUS8 393 aa17.94■□□□□ 0.46
CCDC40-202ENST00000374876 DNAJC25Q9H1X3 360 aa17.94■□□□□ 0.46
CCDC40-202ENST00000374876 EPB41L4AQ9HCS5 686 aaPredicted RBP17.94■□□□□ 0.46
CCDC40-202ENST00000374876 GNAT2P19087 354 aa17.94■□□□□ 0.46
CCDC40-202ENST00000374876 USP5P45974 858 aa17.94■□□□□ 0.46
CCDC40-202ENST00000374876 STK38Q15208 465 aa17.94■□□□□ 0.46
CCDC40-202ENST00000374876 SLC4A8Q2Y0W8 1093 aa17.94■□□□□ 0.46
CCDC40-202ENST00000374876 TMEM67Q5HYA8 995 aa17.94■□□□□ 0.46
CCDC40-202ENST00000374876 APOA5Q6Q788 366 aa17.94■□□□□ 0.46
CCDC40-202ENST00000374876 C2orf69Q8N8R5 385 aa17.94■□□□□ 0.46
CCDC40-202ENST00000374876 NKX2-3Q8TAU0 364 aa17.94■□□□□ 0.46
CCDC40-202ENST00000374876 KCNG4Q8TDN1 519 aa17.94■□□□□ 0.46
CCDC40-202ENST00000374876 NACAP1Q9BZK3 213 aa17.94■□□□□ 0.46
CCDC40-202ENST00000374876 OSBPL5Q9H0X9 879 aaPredicted RBP17.94■□□□□ 0.46
CCDC40-202ENST00000374876 CREBZFQ9NS37 354 aa17.94■□□□□ 0.46
CCDC40-202ENST00000374876 PCDHA7Q9UN72 937 aa17.94■□□□□ 0.46
CCDC40-202ENST00000374876 R3HCC1Q9Y3T6 440 aaKnown RBP17.94■□□□□ 0.46
CCDC40-202ENST00000374876 FLT1P17948 1338 aa17.93■□□□□ 0.46
CCDC40-202ENST00000374876 ZBTB43O43298 467 aa17.93■□□□□ 0.46
CCDC40-202ENST00000374876 ADALQ6DHV7 355 aa17.93■□□□□ 0.46
CCDC40-202ENST00000374876 SYNE3Q6ZMZ3 975 aa17.93■□□□□ 0.46
CCDC40-202ENST00000374876 MICU3Q86XE3 530 aa17.93■□□□□ 0.46
CCDC40-202ENST00000374876 RGS22Q8NE09 1264 aa17.93■□□□□ 0.46
CCDC40-202ENST00000374876 ENGASEQ8NFI3 743 aa17.93■□□□□ 0.46
CCDC40-202ENST00000374876 IGDCC4Q8TDY8 1250 aa17.93■□□□□ 0.46
CCDC40-202ENST00000374876 MRPS27Q92552 414 aaKnown RBP17.93■□□□□ 0.46
CCDC40-202ENST00000374876 CNNM2Q9H8M5 875 aa17.93■□□□□ 0.46
CCDC40-202ENST00000374876 POLR3EQ9NVU0 708 aa17.93■□□□□ 0.46
CCDC40-202ENST00000374876 SAP30BPQ9UHR5 308 aaKnown RBP17.93■□□□□ 0.46
CCDC40-202ENST00000374876 SSC5DA1L4H1 1573 aa17.93■□□□□ 0.46
CCDC40-202ENST00000374876 GSG1L2A8MUP6 293 aa17.93■□□□□ 0.46
CCDC40-202ENST00000374876 UBE2Q2LH0YL09 131 aa17.93■□□□□ 0.46
CCDC40-202ENST00000374876 RXRAP19793 462 aa17.93■□□□□ 0.46
CCDC40-202ENST00000374876 TDO2P48775 406 aa17.93■□□□□ 0.46
CCDC40-202ENST00000374876 CTDSPL2Q05D32 466 aa17.93■□□□□ 0.46
CCDC40-202ENST00000374876 MYSM1Q5VVJ2 828 aa17.93■□□□□ 0.46
CCDC40-202ENST00000374876 SPC24Q8NBT2 197 aa17.93■□□□□ 0.46
CCDC40-202ENST00000374876 LINC00301Q8NCQ3 95 aa17.93■□□□□ 0.46
CCDC40-202ENST00000374876 PIBF1Q8WXW3 757 aa17.93■□□□□ 0.46
CCDC40-202ENST00000374876 CSRNP1Q96S65 589 aa17.93■□□□□ 0.46
CCDC40-202ENST00000374876 ALG1Q9BT22 464 aa17.93■□□□□ 0.46
CCDC40-202ENST00000374876 CRNKL1Q9BZJ0 848 aaKnown RBP17.93■□□□□ 0.46
CCDC40-202ENST00000374876 GJB4Q9NTQ9 266 aa17.93■□□□□ 0.46
CCDC40-202ENST00000374876 CLIC4Q9Y696 253 aa17.93■□□□□ 0.46
CCDC40-202ENST00000374876 CDK5RAP2Q96SN8 1893 aa17.92■□□□□ 0.46
CCDC40-202ENST00000374876 YEATS4O95619 227 aa17.92■□□□□ 0.46
CCDC40-202ENST00000374876 TERF1P54274 439 aa17.92■□□□□ 0.46
CCDC40-202ENST00000374876 KIF23Q02241 960 aaPredicted RBP17.92■□□□□ 0.46
CCDC40-202ENST00000374876 STX1AQ16623 288 aa17.92■□□□□ 0.46
CCDC40-202ENST00000374876 SAPCD2Q86UD0 394 aa17.92■□□□□ 0.46
CCDC40-202ENST00000374876 SGMS1Q86VZ5 419 aa17.92■□□□□ 0.46
CCDC40-202ENST00000374876 CERS3Q8IU89 383 aa17.92■□□□□ 0.46
CCDC40-202ENST00000374876 KRT23Q9C075 422 aa17.92■□□□□ 0.46
CCDC40-202ENST00000374876 LY9Q9HBG7 655 aa17.92■□□□□ 0.46
CCDC40-202ENST00000374876 INCENPQ9NQS7 918 aa17.92■□□□□ 0.46
CCDC40-202ENST00000374876 SLC4A4Q9Y6R1 1079 aa17.92■□□□□ 0.46
CCDC40-202ENST00000374876 A0A1W2PQ27 194 aa17.91■□□□□ 0.46
CCDC40-202ENST00000374876 A0A1W2PQ64 194 aa17.91■□□□□ 0.46
CCDC40-202ENST00000374876 A0A1W2PQD8 194 aa17.91■□□□□ 0.46
CCDC40-202ENST00000374876 IFIT3O14879 490 aaKnown RBP17.91■□□□□ 0.46
CCDC40-202ENST00000374876 USP2O75604 605 aaPredicted RBP17.91■□□□□ 0.46
CCDC40-202ENST00000374876 NPM3O75607 178 aaKnown RBP17.91■□□□□ 0.46
CCDC40-202ENST00000374876 AKNAD1Q5T1N1 836 aa17.91■□□□□ 0.46
CCDC40-202ENST00000374876 MFSD6Q6ZSS7 791 aa17.91■□□□□ 0.46
CCDC40-202ENST00000374876 SENP2Q9HC62 589 aa17.91■□□□□ 0.46
CCDC40-202ENST00000374876 TLL2Q9Y6L7 1015 aa17.91■□□□□ 0.46
CCDC40-202ENST00000374876 GOLGA8AA7E2F4 631 aa17.91■□□□□ 0.46
CCDC40-202ENST00000374876 KIF28PB7ZC32 967 aa17.91■□□□□ 0.46
CCDC40-202ENST00000374876 SPTLC2O15270 562 aa17.91■□□□□ 0.46
CCDC40-202ENST00000374876 PPP1R12BO60237 982 aaPredicted RBP17.91■□□□□ 0.46
CCDC40-202ENST00000374876 LIFRP42702 1097 aa17.91■□□□□ 0.46
CCDC40-202ENST00000374876 HUNKP57058 714 aa17.91■□□□□ 0.46
CCDC40-202ENST00000374876 CCDC144CPQ8IYA2 1237 aa17.91■□□□□ 0.46
CCDC40-202ENST00000374876 ZSWIM5Q9P217 1185 aa17.91■□□□□ 0.46
CCDC40-202ENST00000374876 SLC12A7Q9Y666 1083 aa17.91■□□□□ 0.46
CCDC40-202ENST00000374876 CCDC69A6NI79 296 aa17.9■□□□□ 0.46
CCDC40-202ENST00000374876 CDC27P30260 824 aa17.9■□□□□ 0.46
CCDC40-202ENST00000374876 PHKBQ93100 1093 aa17.9■□□□□ 0.46
CCDC40-202ENST00000374876 TRIM5Q9C035 493 aa17.9■□□□□ 0.46
CCDC40-202ENST00000374876 MKRN1Q9UHC7 482 aaKnown RBP17.9■□□□□ 0.46
CCDC40-202ENST00000374876 GOLGA6L19H0YKK7 550 aa17.89■□□□□ 0.46
CCDC40-202ENST00000374876 GNL2Q13823 731 aaKnown RBP17.89■□□□□ 0.46
CCDC40-202ENST00000374876 FMR1NBQ8N0W7 255 aaPredicted RBP17.89■□□□□ 0.46
CCDC40-202ENST00000374876 AIFM3Q96NN9 605 aa17.89■□□□□ 0.46
CCDC40-202ENST00000374876 DCP1AQ9NPI6 582 aaPredicted RBP17.89■□□□□ 0.46
CCDC40-202ENST00000374876 TOMM22Q9NS69 142 aa17.89■□□□□ 0.46
CCDC40-202ENST00000374876 A0A1B0GVL5 298 aa17.89■□□□□ 0.45
CCDC40-202ENST00000374876 FAM196BA6NMK8 535 aa17.89■□□□□ 0.45
CCDC40-202ENST00000374876 TRIM29Q14134 588 aa17.89■□□□□ 0.45
CCDC40-202ENST00000374876 NOLC1Q14978 699 aaKnown RBP eCLIP17.89■□□□□ 0.45
CCDC40-202ENST00000374876 SART3Q15020 963 aaKnown RBP17.89■□□□□ 0.45
CCDC40-202ENST00000374876 RRP12Q5JTH9 1297 aaKnown RBP17.89■□□□□ 0.45
CCDC40-202ENST00000374876 ANO1Q5XXA6 986 aa17.89■□□□□ 0.45
CCDC40-202ENST00000374876 ARMC9Q7Z3E5 817 aa17.89■□□□□ 0.45
CCDC40-202ENST00000374876 STAG1Q8WVM7 1258 aa17.89■□□□□ 0.45
CCDC40-202ENST00000374876 SDF4Q9BRK5 362 aa17.89■□□□□ 0.45
CCDC40-202ENST00000374876 ANO10Q9NW15 660 aa17.89■□□□□ 0.45
CCDC40-202ENST00000374876 MCM9Q9NXL9 1143 aa17.89■□□□□ 0.45
CCDC40-202ENST00000374876 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.88■□□□□ 0.45
CCDC40-202ENST00000374876 NDUFA8P51970 172 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms