RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 FECHP22830 423 aa20.37■□□□□ 0.85
PHF1-201ENST00000374512 CC2D1AQ6P1N0 951 aaPredicted RBP20.37■□□□□ 0.85
PHF1-201ENST00000374512 TMED8Q6PL24 325 aaPredicted RBP20.37■□□□□ 0.85
PHF1-201ENST00000374512 SDR42E1Q8WUS8 393 aa20.37■□□□□ 0.85
PHF1-201ENST00000374512 BRIP1Q9BX63 1249 aa20.37■□□□□ 0.85
PHF1-201ENST00000374512 ADGRG1Q9Y653 693 aa20.37■□□□□ 0.85
PHF1-201ENST00000374512 COL4A1P02462 1669 aa20.37■□□□□ 0.85
PHF1-201ENST00000374512 ATP2B1P20020 1258 aa20.37■□□□□ 0.85
PHF1-201ENST00000374512 GYG1P46976 350 aa20.37■□□□□ 0.85
PHF1-201ENST00000374512 VPS72Q15906 364 aa20.37■□□□□ 0.85
PHF1-201ENST00000374512 IQCA1Q86XH1 822 aa20.37■□□□□ 0.85
PHF1-201ENST00000374512 ENAHQ8N8S7 591 aaPredicted RBP20.37■□□□□ 0.85
PHF1-201ENST00000374512 SYMPKQ92797 1274 aaKnown RBP20.37■□□□□ 0.85
PHF1-201ENST00000374512 ARFGAP3Q9NP61 516 aa20.37■□□□□ 0.85
PHF1-201ENST00000374512 DDAH1O94760 285 aa20.36■□□□□ 0.85
PHF1-201ENST00000374512 TRAPPC10P48553 1259 aa20.36■□□□□ 0.85
PHF1-201ENST00000374512 SF3B3Q15393 1217 aaKnown RBP20.36■□□□□ 0.85
PHF1-201ENST00000374512 CAVIN4Q5BKX8 364 aa20.36■□□□□ 0.85
PHF1-201ENST00000374512 RASGRP2Q7LDG7 609 aa20.36■□□□□ 0.85
PHF1-201ENST00000374512 LINC00116Q8NCU8 138 aa20.36■□□□□ 0.85
PHF1-201ENST00000374512 CCDC12Q8WUD4 166 aaPredicted RBP20.36■□□□□ 0.85
PHF1-201ENST00000374512 BSDC1Q9NW68 430 aaPredicted RBP20.36■□□□□ 0.85
PHF1-201ENST00000374512 CACNA1SQ13698 1873 aa20.36■□□□□ 0.85
PHF1-201ENST00000374512 DLEC1Q9Y238 1755 aa20.35■□□□□ 0.85
PHF1-201ENST00000374512 RGL2O15211 777 aa20.35■□□□□ 0.85
PHF1-201ENST00000374512 KIF5CO60282 957 aa20.35■□□□□ 0.85
PHF1-201ENST00000374512 CYP2C19P33261 490 aa20.35■□□□□ 0.85
PHF1-201ENST00000374512 IFIT1BQ5T764 474 aaKnown RBP20.35■□□□□ 0.85
PHF1-201ENST00000374512 EPSTI1Q96J88 318 aa20.35■□□□□ 0.85
PHF1-201ENST00000374512 VPS54Q9P1Q0 977 aa20.35■□□□□ 0.85
PHF1-201ENST00000374512 DUOX1Q9NRD9 1551 aa20.35■□□□□ 0.85
PHF1-201ENST00000374512 A0A087X0B3 334 aa20.35■□□□□ 0.85
PHF1-201ENST00000374512 LRRC10BA6NIK2 292 aa20.35■□□□□ 0.85
PHF1-201ENST00000374512 PPP1R3GB7ZBB8 358 aa20.35■□□□□ 0.85
PHF1-201ENST00000374512 POTEB2H3BUK9 544 aa20.35■□□□□ 0.85
PHF1-201ENST00000374512 MFAP3LO75121 409 aa20.35■□□□□ 0.85
PHF1-201ENST00000374512 TXLNAP40222 546 aa20.35■□□□□ 0.85
PHF1-201ENST00000374512 SPAG1Q07617 926 aa20.35■□□□□ 0.85
PHF1-201ENST00000374512 RBL2Q08999 1139 aa20.35■□□□□ 0.85
PHF1-201ENST00000374512 ERFEQ4G0M1 354 aa20.35■□□□□ 0.85
PHF1-201ENST00000374512 AEBP2Q6ZN18 517 aaPredicted RBP20.35■□□□□ 0.85
PHF1-201ENST00000374512 CEP112Q8N8E3 955 aa20.35■□□□□ 0.85
PHF1-201ENST00000374512 TNFRSF25Q93038 417 aa20.35■□□□□ 0.85
PHF1-201ENST00000374512 RIOK1Q9BRS2 568 aaKnown RBP20.35■□□□□ 0.85
PHF1-201ENST00000374512 CASZ1Q86V15 1759 aa20.35■□□□□ 0.85
PHF1-201ENST00000374512 MYH2Q9UKX2 1941 aa20.34■□□□□ 0.85
PHF1-201ENST00000374512 CCDC151A5D8V7 595 aa20.34■□□□□ 0.85
PHF1-201ENST00000374512 TEX33O43247 280 aa20.34■□□□□ 0.85
PHF1-201ENST00000374512 TBC1D8O95759 1140 aa20.34■□□□□ 0.85
PHF1-201ENST00000374512 ATP2C1P98194 919 aaPredicted RBP20.34■□□□□ 0.85
PHF1-201ENST00000374512 BRD3Q15059 726 aa20.34■□□□□ 0.85
PHF1-201ENST00000374512 IQUBQ8NA54 791 aa20.34■□□□□ 0.85
PHF1-201ENST00000374512 MRPL44Q9H9J2 332 aaKnown RBP20.34■□□□□ 0.85
PHF1-201ENST00000374512 ST7Q9NRC1 585 aa20.34■□□□□ 0.85
PHF1-201ENST00000374512 TTF2Q9UNY4 1162 aaKnown RBP20.34■□□□□ 0.85
PHF1-201ENST00000374512 CNTNAP4Q9C0A0 1308 aa20.34■□□□□ 0.85
PHF1-201ENST00000374512 COL1A1P02452 1464 aaPredicted RBP20.34■□□□□ 0.85
PHF1-201ENST00000374512 CD44P16070 742 aaKnown RBP20.34■□□□□ 0.85
PHF1-201ENST00000374512 AFMP43652 599 aa20.34■□□□□ 0.85
PHF1-201ENST00000374512 TROAPQ12815 778 aa20.34■□□□□ 0.85
PHF1-201ENST00000374512 TRIM14Q14142 442 aa20.34■□□□□ 0.85
PHF1-201ENST00000374512 SRGAP1Q7Z6B7 1085 aa20.34■□□□□ 0.85
PHF1-201ENST00000374512 SHISA4Q96DD7 197 aa20.34■□□□□ 0.85
PHF1-201ENST00000374512 NGLY1Q96IV0 654 aa20.34■□□□□ 0.85
PHF1-201ENST00000374512 DESI2Q9BSY9 194 aa20.34■□□□□ 0.85
PHF1-201ENST00000374512 V9GY48 417 aaPredicted RBP20.34■□□□□ 0.85
PHF1-201ENST00000374512 SOWAHDA6NJG2 315 aa20.33■□□□□ 0.85
PHF1-201ENST00000374512 TTC38Q5R3I4 469 aa20.33■□□□□ 0.85
PHF1-201ENST00000374512 TMTC1Q8IUR5 882 aa20.33■□□□□ 0.85
PHF1-201ENST00000374512 PARD6BQ9BYG5 372 aa20.33■□□□□ 0.85
PHF1-201ENST00000374512 CALCOCO1Q9P1Z2 691 aa20.33■□□□□ 0.85
PHF1-201ENST00000374512 LIMA1Q9UHB6 759 aaKnown RBP20.33■□□□□ 0.85
PHF1-201ENST00000374512 TAF1P21675 1872 aa20.33■□□□□ 0.84
PHF1-201ENST00000374512 BAZ2AQ9UIF9 1905 aaKnown RBP20.33■□□□□ 0.84
PHF1-201ENST00000374512 SCN7AQ01118 1682 aa20.33■□□□□ 0.84
PHF1-201ENST00000374512 TMTC3Q6ZXV5 915 aa20.33■□□□□ 0.84
PHF1-201ENST00000374512 MYO1AQ9UBC5 1043 aa20.33■□□□□ 0.84
PHF1-201ENST00000374512 CDC23Q9UJX2 597 aa20.33■□□□□ 0.84
PHF1-201ENST00000374512 KLHL10Q6JEL2 608 aa20.32■□□□□ 0.84
PHF1-201ENST00000374512 RAD9BQ6WBX8 426 aa20.32■□□□□ 0.84
PHF1-201ENST00000374512 ANKRD20A12PQ8NF67 263 aa20.32■□□□□ 0.84
PHF1-201ENST00000374512 HNRNPLLQ8WVV9 542 aaKnown RBP20.32■□□□□ 0.84
PHF1-201ENST00000374512 C8orf37Q96NL8 207 aa20.32■□□□□ 0.84
PHF1-201ENST00000374512 RWDD2AQ9UIY3 292 aa20.32■□□□□ 0.84
PHF1-201ENST00000374512 MINPP1Q9UNW1 487 aa20.32■□□□□ 0.84
PHF1-201ENST00000374512 KARSQ15046 597 aaKnown RBP20.31■□□□□ 0.84
PHF1-201ENST00000374512 C3orf67Q6ZVT6 689 aa20.31■□□□□ 0.84
PHF1-201ENST00000374512 RMND1Q9NWS8 449 aa20.31■□□□□ 0.84
PHF1-201ENST00000374512 FAM205CA6NFA0 338 aa20.31■□□□□ 0.84
PHF1-201ENST00000374512 CHMP4BP1P59074 171 aa20.31■□□□□ 0.84
PHF1-201ENST00000374512 MTF1Q14872 753 aa20.31■□□□□ 0.84
PHF1-201ENST00000374512 E2F4Q16254 413 aa20.31■□□□□ 0.84
PHF1-201ENST00000374512 EARS2Q5JPH6 523 aaKnown RBP20.31■□□□□ 0.84
PHF1-201ENST00000374512 MSL3Q8N5Y2 521 aaKnown RBP20.31■□□□□ 0.84
PHF1-201ENST00000374512 GTPBP6O43824 516 aaPredicted RBP20.3■□□□□ 0.84
PHF1-201ENST00000374512 SEC31AO94979 1220 aaKnown RBP20.3■□□□□ 0.84
PHF1-201ENST00000374512 TUBBP07437 444 aa20.3■□□□□ 0.84
PHF1-201ENST00000374512 PTGDRQ13258 359 aa20.3■□□□□ 0.84
PHF1-201ENST00000374512 NPY5RQ15761 445 aa20.3■□□□□ 0.84
PHF1-201ENST00000374512 FAM84BQ96KN1 310 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms