RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 NYAP2Q9P242 653 aa20.51■□□□□ 0.87
C9orf43-202ENST00000374165 VGLL4Q14135 290 aa20.5■□□□□ 0.87
C9orf43-202ENST00000374165 CHADLQ6NUI6 762 aa20.5■□□□□ 0.87
C9orf43-202ENST00000374165 CATIPQ7Z7H3 387 aa20.5■□□□□ 0.87
C9orf43-202ENST00000374165 SCYL3Q8IZE3 742 aa20.5■□□□□ 0.87
C9orf43-202ENST00000374165 CMTR1Q8N1G2 835 aaKnown RBP20.5■□□□□ 0.87
C9orf43-202ENST00000374165 PCNTO95613 3336 aa20.5■□□□□ 0.87
C9orf43-202ENST00000374165 CTDNEP1O95476 244 aa20.49■□□□□ 0.87
C9orf43-202ENST00000374165 METAP2P50579 478 aaKnown RBP eCLIP20.49■□□□□ 0.87
C9orf43-202ENST00000374165 FANCBQ8NB91 859 aa20.49■□□□□ 0.87
C9orf43-202ENST00000374165 MKL1Q969V6 931 aa20.49■□□□□ 0.87
C9orf43-202ENST00000374165 CLMNQ96JQ2 1002 aa20.49■□□□□ 0.87
C9orf43-202ENST00000374165 PHIPQ8WWQ0 1821 aa20.49■□□□□ 0.87
C9orf43-202ENST00000374165 NF2P35240 595 aa20.49■□□□□ 0.87
C9orf43-202ENST00000374165 TTLL12Q14166 644 aaPredicted RBP20.49■□□□□ 0.87
C9orf43-202ENST00000374165 PTPRAP18433 802 aa20.48■□□□□ 0.87
C9orf43-202ENST00000374165 KIAA1755Q5JYT7 1200 aa20.48■□□□□ 0.87
C9orf43-202ENST00000374165 CST9Q5W186 159 aa20.48■□□□□ 0.87
C9orf43-202ENST00000374165 SYNE3Q6ZMZ3 975 aa20.48■□□□□ 0.87
C9orf43-202ENST00000374165 CNKSR2Q8WXI2 1034 aa20.48■□□□□ 0.87
C9orf43-202ENST00000374165 SNCAIPQ9Y6H5 919 aa20.48■□□□□ 0.87
C9orf43-202ENST00000374165 GOLGA8AA7E2F4 631 aa20.48■□□□□ 0.87
C9orf43-202ENST00000374165 UBE2Q2LH0YL09 131 aa20.48■□□□□ 0.87
C9orf43-202ENST00000374165 GOLGA8HP0CJ92 632 aa20.48■□□□□ 0.87
C9orf43-202ENST00000374165 MAP3K9P80192 1104 aa20.48■□□□□ 0.87
C9orf43-202ENST00000374165 DGKZQ13574 1117 aa20.48■□□□□ 0.87
C9orf43-202ENST00000374165 USP17L2Q6R6M4 530 aa20.48■□□□□ 0.87
C9orf43-202ENST00000374165 STAG2Q8N3U4 1231 aa20.48■□□□□ 0.87
C9orf43-202ENST00000374165 USP17L5A8MUK1 530 aa20.47■□□□□ 0.87
C9orf43-202ENST00000374165 JAK2O60674 1132 aa20.47■□□□□ 0.87
C9orf43-202ENST00000374165 CCDC82Q8N4S0 544 aa20.47■□□□□ 0.87
C9orf43-202ENST00000374165 RAD21O60216 631 aa20.46■□□□□ 0.87
C9orf43-202ENST00000374165 DDAH1O94760 285 aa20.46■□□□□ 0.87
C9orf43-202ENST00000374165 CELF2O95319 508 aaKnown RBP20.46■□□□□ 0.87
C9orf43-202ENST00000374165 PDHBP11177 359 aa20.46■□□□□ 0.87
C9orf43-202ENST00000374165 YY1P25490 414 aa20.46■□□□□ 0.87
C9orf43-202ENST00000374165 IREB2P48200 963 aaKnown RBP20.46■□□□□ 0.87
C9orf43-202ENST00000374165 ZYXQ15942 572 aaKnown RBP20.46■□□□□ 0.87
C9orf43-202ENST00000374165 NTRK3Q16288 839 aa20.46■□□□□ 0.87
C9orf43-202ENST00000374165 MAP3K11Q16584 847 aa20.46■□□□□ 0.87
C9orf43-202ENST00000374165 NBPF11Q86T75 865 aa20.46■□□□□ 0.87
C9orf43-202ENST00000374165 SPICE1Q8N0Z3 855 aa20.46■□□□□ 0.87
C9orf43-202ENST00000374165 CWC22Q9HCG8 908 aaKnown RBP20.46■□□□□ 0.87
C9orf43-202ENST00000374165 ZHX2Q9Y6X8 837 aa20.46■□□□□ 0.87
C9orf43-202ENST00000374165 F5H6K3 240 aa20.46■□□□□ 0.87
C9orf43-202ENST00000374165 PLEKHA8P1O95397 391 aa20.46■□□□□ 0.87
C9orf43-202ENST00000374165 KLRC3Q07444 240 aa20.46■□□□□ 0.87
C9orf43-202ENST00000374165 RTN1Q16799 776 aa20.46■□□□□ 0.87
C9orf43-202ENST00000374165 NOL9Q5SY16 702 aaKnown RBP20.46■□□□□ 0.87
C9orf43-202ENST00000374165 CPVLQ9H3G5 476 aa20.46■□□□□ 0.87
C9orf43-202ENST00000374165 MAD2L2Q9UI95 211 aa20.46■□□□□ 0.87
C9orf43-202ENST00000374165 TMX2Q9Y320 296 aa20.46■□□□□ 0.87
C9orf43-202ENST00000374165 NID2Q14112 1375 aa20.45■□□□□ 0.86
C9orf43-202ENST00000374165 SPP2Q13103 211 aa20.45■□□□□ 0.86
C9orf43-202ENST00000374165 ZNF784Q8NCA9 323 aaPredicted RBP20.45■□□□□ 0.86
C9orf43-202ENST00000374165 PICK1Q9NRD5 415 aa20.45■□□□□ 0.86
C9orf43-202ENST00000374165 TRPM7Q96QT4 1865 aa20.45■□□□□ 0.86
C9orf43-202ENST00000374165 SLC35G1Q2M3R5 365 aa20.44■□□□□ 0.86
C9orf43-202ENST00000374165 NSUN7Q8NE18 718 aaKnown RBP20.44■□□□□ 0.86
C9orf43-202ENST00000374165 NUP88Q99567 741 aaPredicted RBP20.44■□□□□ 0.86
C9orf43-202ENST00000374165 ELP3Q9H9T3 547 aa20.44■□□□□ 0.86
C9orf43-202ENST00000374165 ARHGEF10LQ9HCE6 1279 aa20.44■□□□□ 0.86
C9orf43-202ENST00000374165 FRMPD2Q68DX3 1309 aaPredicted RBP20.44■□□□□ 0.86
C9orf43-202ENST00000374165 CALM1P0DP23 149 aa20.44■□□□□ 0.86
C9orf43-202ENST00000374165 CALM2P0DP24 149 aa20.44■□□□□ 0.86
C9orf43-202ENST00000374165 CALM3P0DP25 149 aa20.44■□□□□ 0.86
C9orf43-202ENST00000374165 SNHG28P0DPA3 235 aa20.44■□□□□ 0.86
C9orf43-202ENST00000374165 RCAN1P53805 252 aa20.44■□□□□ 0.86
C9orf43-202ENST00000374165 GRM4Q14833 912 aa20.44■□□□□ 0.86
C9orf43-202ENST00000374165 LDLRAD1Q5T700 205 aa20.44■□□□□ 0.86
C9orf43-202ENST00000374165 ANKRD13AQ8IZ07 590 aa20.44■□□□□ 0.86
C9orf43-202ENST00000374165 TNPO1Q92973 898 aaKnown RBP20.44■□□□□ 0.86
C9orf43-202ENST00000374165 PHKBQ93100 1093 aa20.44■□□□□ 0.86
C9orf43-202ENST00000374165 INTS4Q96HW7 963 aaKnown RBP20.44■□□□□ 0.86
C9orf43-202ENST00000374165 TRIM75PA6NK02 468 aa20.43■□□□□ 0.86
C9orf43-202ENST00000374165 NDUFB10O96000 172 aa20.43■□□□□ 0.86
C9orf43-202ENST00000374165 ARMC9Q7Z3E5 817 aa20.43■□□□□ 0.86
C9orf43-202ENST00000374165 DDX11Q96FC9 970 aa20.43■□□□□ 0.86
C9orf43-202ENST00000374165 GINM1Q9NU53 330 aa20.43■□□□□ 0.86
C9orf43-202ENST00000374165 CSADQ9Y600 493 aa20.43■□□□□ 0.86
C9orf43-202ENST00000374165 PALM3A6NDB9 673 aaPredicted RBP20.43■□□□□ 0.86
C9orf43-202ENST00000374165 FUT2Q10981 343 aa20.43■□□□□ 0.86
C9orf43-202ENST00000374165 MTMR2Q13614 643 aa20.43■□□□□ 0.86
C9orf43-202ENST00000374165 PPP4R3BQ5MIZ7 849 aa20.43■□□□□ 0.86
C9orf43-202ENST00000374165 SLFN13Q68D06 897 aa20.43■□□□□ 0.86
C9orf43-202ENST00000374165 KCTD1Q719H9 257 aa20.43■□□□□ 0.86
C9orf43-202ENST00000374165 SRBD1Q8N5C6 995 aaKnown RBP20.43■□□□□ 0.86
C9orf43-202ENST00000374165 CTCFLQ8NI51 663 aaPredicted RBP20.43■□□□□ 0.86
C9orf43-202ENST00000374165 GBA2Q9HCG7 927 aaPredicted RBP20.43■□□□□ 0.86
C9orf43-202ENST00000374165 CPLX1O14810 134 aa20.42■□□□□ 0.86
C9orf43-202ENST00000374165 FDPSP14324 419 aaKnown RBP20.42■□□□□ 0.86
C9orf43-202ENST00000374165 TTBK2Q6IQ55 1244 aa20.42■□□□□ 0.86
C9orf43-202ENST00000374165 ZNF280CQ8ND82 737 aa20.42■□□□□ 0.86
C9orf43-202ENST00000374165 GMCL1P1Q8NEA9 526 aa20.42■□□□□ 0.86
C9orf43-202ENST00000374165 AFG3L2Q9Y4W6 797 aa20.42■□□□□ 0.86
C9orf43-202ENST00000374165 PTPRFP10586 1907 aa20.41■□□□□ 0.86
C9orf43-202ENST00000374165 PTPDC1A2A3K4 754 aa20.41■□□□□ 0.86
C9orf43-202ENST00000374165 CYTH3O43739 400 aa20.41■□□□□ 0.86
C9orf43-202ENST00000374165 PARP1P09874 1014 aaKnown RBP20.41■□□□□ 0.86
C9orf43-202ENST00000374165 PKP1Q13835 747 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms