RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 KLHL30Q0D2K2 578 aa12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 PPP1R21Q6ZMI0 780 aa12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 EXOC8Q8IYI6 725 aa12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 FAM227BQ96M60 508 aa12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 LARSQ9P2J5 1176 aaKnown RBP12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 IFT20Q8IY31 132 aa12.29□□□□□ -0.44
PHACTR4-202ENST00000373839 ABCD1P33897 745 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 SFMBT2Q5VUG0 894 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 FBXO11Q86XK2 927 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 FAM76AQ8TAV0 307 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 TEKT3Q9BXF9 490 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 PSTPIP2Q9H939 334 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 MAGEF1Q9HAY2 307 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 USP17L12C9JPN9 530 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 USP17L21D6R901 530 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 E7EWF7 191 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 TNNI1P19237 187 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 AOC3Q16853 763 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 INTS8Q75QN2 995 aaKnown RBP12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 DAAM2Q86T65 1068 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 VPS52Q8N1B4 723 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 UBLCP1Q8WVY7 318 aaPredicted RBP12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 NBPF3Q9H094 633 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 ZNF277Q9NRM2 450 aaPredicted RBP12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 ZNF202O95125 648 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 RUFY4Q6ZNE9 571 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 SSH3Q8TE77 659 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 RABGAP1Q9Y3P9 1069 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 PTPRTO14522 1441 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 ARHGAP6O43182 974 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 CLCN1P35523 988 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 FANCCQ00597 558 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 UBE3CQ15386 1083 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 SUPT20HL1Q3ZLR7 823 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 BLIDQ8IZY5 108 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 TIGD1Q96MW7 591 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 SEC62Q99442 399 aaKnown RBP12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 METTL14Q9HCE5 456 aaKnown RBP12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 PARP2Q9UGN5 583 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 TRIM35Q9UPQ4 493 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 SARNPP82979 210 aaKnown RBP12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 GPATCH4Q5T3I0 446 aaKnown RBP12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 SYT10Q6XYQ8 523 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 ANKRD35Q8N283 1001 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 PPFIBP2Q8ND30 876 aa12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 NOC2LQ9Y3T9 749 aaKnown RBP12.28□□□□□ -0.44
PHACTR4-202ENST00000373839 CFAP43Q8NDM7 1665 aa12.27□□□□□ -0.44
PHACTR4-202ENST00000373839 ATP2C2O75185 946 aa12.27□□□□□ -0.44
PHACTR4-202ENST00000373839 CIB2O75838 187 aa12.27□□□□□ -0.44
PHACTR4-202ENST00000373839 ZWINTO95229 277 aa12.27□□□□□ -0.44
PHACTR4-202ENST00000373839 TFDP1Q14186 410 aa12.27□□□□□ -0.44
PHACTR4-202ENST00000373839 RSPH3Q86UC2 560 aa12.27□□□□□ -0.44
PHACTR4-202ENST00000373839 PAGR1Q9BTK6 254 aa12.27□□□□□ -0.44
PHACTR4-202ENST00000373839 ZMYND15Q9H091 742 aa12.27□□□□□ -0.44
PHACTR4-202ENST00000373839 LOC102724428A0A0B4J2F2 783 aa12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 hCG_1984214I3L0E3 225 aa12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 BBOX1O75936 387 aa12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 TRIM37O94972 964 aa12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 SIK1P57059 783 aa12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 KCTD2Q14681 263 aa12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 ZNF713Q8N859 430 aaPredicted RBP12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 FAM193BQ96PV7 902 aaPredicted RBP12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 TNNQ9UQP3 1299 aa12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 SOS2Q07890 1332 aaPredicted RBP12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 KIF21AQ7Z4S6 1674 aa12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 PFDN6O15212 129 aa12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 ALAS1P13196 640 aa12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 GABPAQ06546 454 aa12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 MTMR3Q13615 1198 aa12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 PPP2R5AQ15172 486 aa12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 CDC37L1Q7L3B6 337 aa12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 TPH2Q8IWU9 490 aa12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 HAUS1Q96CS2 278 aa12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 WDR17Q8IZU2 1322 aa12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 PZPP20742 1482 aa12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 CIAO1O76071 339 aa12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 ARHGAP27Q6ZUM4 889 aa12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 IFNL3Q8IZI9 196 aa12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 CACYBPQ9HB71 228 aaKnown RBP12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 NCOA5Q9HCD5 579 aaKnown RBP12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 PFDN4Q9NQP4 134 aa12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 PLEKHG1Q9ULL1 1385 aa12.27□□□□□ -0.45
PHACTR4-202ENST00000373839 TESPA1A2RU30 521 aaPredicted RBP12.26□□□□□ -0.45
PHACTR4-202ENST00000373839 PDE6AP16499 860 aa12.26□□□□□ -0.45
PHACTR4-202ENST00000373839 LIG4P49917 911 aa12.26□□□□□ -0.45
PHACTR4-202ENST00000373839 FAM47CQ5HY64 1035 aa12.26□□□□□ -0.45
PHACTR4-202ENST00000373839 RPGRIP1Q96KN7 1286 aa12.26□□□□□ -0.45
PHACTR4-202ENST00000373839 HESX1Q9UBX0 185 aa12.26□□□□□ -0.45
PHACTR4-202ENST00000373839 TPCN1Q9ULQ1 816 aa12.26□□□□□ -0.45
PHACTR4-202ENST00000373839 COL4A3BPQ9Y5P4 624 aa12.26□□□□□ -0.45
PHACTR4-202ENST00000373839 XRCC5P13010 732 aaKnown RBP12.26□□□□□ -0.45
PHACTR4-202ENST00000373839 NEK8Q86SG6 692 aa12.26□□□□□ -0.45
PHACTR4-202ENST00000373839 MYOCDQ8IZQ8 938 aa12.26□□□□□ -0.45
PHACTR4-202ENST00000373839 PNMA1Q8ND90 353 aa12.26□□□□□ -0.45
PHACTR4-202ENST00000373839 ASIC3Q9UHC3 531 aa12.26□□□□□ -0.45
PHACTR4-202ENST00000373839 SERPINA10Q9UK55 444 aa12.26□□□□□ -0.45
PHACTR4-202ENST00000373839 NFE2L3Q9Y4A8 694 aa12.26□□□□□ -0.45
PHACTR4-202ENST00000373839 ARHGEF37A1IGU5 675 aa12.26□□□□□ -0.45
PHACTR4-202ENST00000373839 POLR2BP30876 1174 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms