RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 HHIPL2Q6UWX4 724 aa9.99□□□□□ -0.81
SNRNP40-202ENST00000373720 OLFM4Q6UX06 510 aa9.99□□□□□ -0.81
SNRNP40-202ENST00000373720 MLKLQ8NB16 471 aa9.99□□□□□ -0.81
SNRNP40-202ENST00000373720 DAGLBQ8NCG7 672 aa9.99□□□□□ -0.81
SNRNP40-202ENST00000373720 SUPT20HQ8NEM7 779 aa9.99□□□□□ -0.81
SNRNP40-202ENST00000373720 MASTLQ96GX5 879 aa9.99□□□□□ -0.81
SNRNP40-202ENST00000373720 PRIMPOLQ96LW4 560 aa9.99□□□□□ -0.81
SNRNP40-202ENST00000373720 ZC3H12CQ9C0D7 883 aaKnown RBP9.99□□□□□ -0.81
SNRNP40-202ENST00000373720 GPHNQ9NQX3 736 aaPredicted RBP9.99□□□□□ -0.81
SNRNP40-202ENST00000373720 LRRC4BQ9NT99 713 aa9.99□□□□□ -0.81
SNRNP40-202ENST00000373720 CLIC4Q9Y696 253 aa9.99□□□□□ -0.81
SNRNP40-202ENST00000373720 PLIN4Q96Q06 1357 aa9.99□□□□□ -0.81
SNRNP40-202ENST00000373720 LRRC37AA6NMS7 1700 aa9.99□□□□□ -0.81
SNRNP40-202ENST00000373720 NRXN2Q9P2S2 1712 aa9.99□□□□□ -0.81
SNRNP40-202ENST00000373720 MYO5AQ9Y4I1 1855 aaKnown RBP9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 SNAP23O00161 211 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 PPEF1O14829 653 aaPredicted RBP9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 CCP110O43303 1012 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 TSPY3P0CV98 308 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 TSPY8P0CW00 308 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 SCG2P13521 617 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 PFKFB1P16118 471 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 GNA11P29992 359 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 PRDX5P30044 214 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 PPP1R2P41236 205 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 NDUFA8P51970 172 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 TRAF1Q13077 416 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 STYK1Q6J9G0 422 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 C16orf86Q6ZW13 317 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 NEDD1Q8NHV4 660 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 TBC1D16Q8TBP0 767 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 ZNF384Q8TF68 577 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 NUP133Q8WUM0 1156 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 PHKBQ93100 1093 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 CCDC17Q96LX7 622 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 NAP1L4Q99733 375 aaKnown RBP9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 SPZ1Q9BXG8 430 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 TRIM5Q9C035 493 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 DHX36Q9H2U1 1008 aaKnown RBP9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 CUEDC2Q9H467 287 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 MAGEF1Q9HAY2 307 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 RRAGDQ9NQL2 400 aaPredicted RBP9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 KCND1Q9NSA2 647 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 KCNH3Q9ULD8 1083 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 PARP3Q9Y6F1 533 aa9.98□□□□□ -0.81
SNRNP40-202ENST00000373720 ESYT2A0FGR8 921 aa9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 KIF2AO00139 706 aaPredicted RBP9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 SLC26A4O43511 780 aa9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 SRGNP10124 158 aa9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 TOP1P11387 765 aaKnown RBP9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 ERCC5P28715 1186 aaPredicted RBP9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 LONP1P36776 959 aaKnown RBP9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 TXLNAP40222 546 aa9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 PRPHP41219 470 aa9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 ZNF75DP51815 510 aa9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 DYNLL1P63167 89 aaKnown RBP9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 GPSM2P81274 684 aa9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 GUCY1B3Q02153 619 aa9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 CEBPZQ03701 1054 aaKnown RBP9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 CHAF1AQ13111 956 aaPredicted RBP9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 GRM4Q14833 912 aa9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 RCSD1Q6JBY9 416 aa9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 KRBA2Q6ZNG9 492 aa9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 MTERF4Q7Z6M4 381 aaKnown RBP9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 CKAP2LQ8IYA6 745 aa9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 CNNM3Q8NE01 707 aa9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 AK8Q96MA6 479 aa9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 GSDMAQ96QA5 445 aa9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 RTFDC1Q9BY42 306 aaPredicted RBP9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 KRTAP3-3Q9BYR6 98 aa9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 KRTAP3-2Q9BYR7 98 aa9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 EHD4Q9H223 541 aa9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 SPTLC3Q9NUV7 552 aa9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 TFCP2L1Q9NZI6 479 aa9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 BOLA1Q9Y3E2 137 aa9.97□□□□□ -0.81
SNRNP40-202ENST00000373720 BTBD18B2RXH4 712 aa9.96□□□□□ -0.82
SNRNP40-202ENST00000373720 KIF28PB7ZC32 967 aa9.96□□□□□ -0.82
SNRNP40-202ENST00000373720 TFAP4Q01664 338 aa9.96□□□□□ -0.82
SNRNP40-202ENST00000373720 PKN1Q16512 942 aa9.96□□□□□ -0.82
SNRNP40-202ENST00000373720 MFSD14BQ5SR56 506 aa9.96□□□□□ -0.82
SNRNP40-202ENST00000373720 PPP1R18Q6NYC8 613 aa9.96□□□□□ -0.82
SNRNP40-202ENST00000373720 ZNF710Q8N1W2 664 aa9.96□□□□□ -0.82
SNRNP40-202ENST00000373720 MPNDQ8N594 471 aa9.96□□□□□ -0.82
SNRNP40-202ENST00000373720 PNMA1Q8ND90 353 aa9.96□□□□□ -0.82
SNRNP40-202ENST00000373720 CNKSR1Q969H4 720 aa9.96□□□□□ -0.82
SNRNP40-202ENST00000373720 DNAJC25Q9H1X3 360 aa9.96□□□□□ -0.82
SNRNP40-202ENST00000373720 GOLPH3LQ9H4A5 285 aa9.96□□□□□ -0.82
SNRNP40-202ENST00000373720 RMND1Q9NWS8 449 aa9.96□□□□□ -0.82
SNRNP40-202ENST00000373720 V9GY48 417 aaPredicted RBP9.96□□□□□ -0.82
SNRNP40-202ENST00000373720 A0A1B0GVL5 298 aa9.95□□□□□ -0.82
SNRNP40-202ENST00000373720 PALM3A6NDB9 673 aaPredicted RBP9.95□□□□□ -0.82
SNRNP40-202ENST00000373720 SLFN14P0C7P3 912 aa9.95□□□□□ -0.82
SNRNP40-202ENST00000373720 NLRP5P59047 1200 aa9.95□□□□□ -0.82
SNRNP40-202ENST00000373720 MYL5Q02045 173 aa9.95□□□□□ -0.82
SNRNP40-202ENST00000373720 ASPRV1Q53RT3 343 aa9.95□□□□□ -0.82
SNRNP40-202ENST00000373720 SHC4Q6S5L8 630 aa9.95□□□□□ -0.82
SNRNP40-202ENST00000373720 PTF1AQ7RTS3 328 aa9.95□□□□□ -0.82
SNRNP40-202ENST00000373720 TEX11Q8IYF3 940 aa9.95□□□□□ -0.82
SNRNP40-202ENST00000373720 IQUBQ8NA54 791 aa9.95□□□□□ -0.82
SNRNP40-202ENST00000373720 CCDC150Q8NCX0 1101 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms