RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 ZFYVE28Q9HCC9 887 aa21.6■■□□□ 1.05
PBX3-202ENST00000373482 SYNPO2Q9UMS6 1093 aa21.6■■□□□ 1.05
PBX3-202ENST00000373482 STX8Q9UNK0 236 aa21.6■■□□□ 1.05
PBX3-202ENST00000373482 RAD21O60216 631 aa21.59■■□□□ 1.05
PBX3-202ENST00000373482 NMT2O60551 498 aa21.59■■□□□ 1.05
PBX3-202ENST00000373482 OSBPP22059 807 aa21.59■■□□□ 1.05
PBX3-202ENST00000373482 TREML2Q5T2D2 321 aa21.59■■□□□ 1.05
PBX3-202ENST00000373482 MKL1Q969V6 931 aa21.59■■□□□ 1.05
PBX3-202ENST00000373482 PARK7Q99497 189 aaKnown RBP21.59■■□□□ 1.05
PBX3-202ENST00000373482 CFHR5Q9BXR6 569 aa21.59■■□□□ 1.05
PBX3-202ENST00000373482 IL17RBQ9NRM6 502 aa21.59■■□□□ 1.05
PBX3-202ENST00000373482 ZSWIM5Q9P217 1185 aa21.59■■□□□ 1.05
PBX3-202ENST00000373482 TBC1D8O95759 1140 aa21.58■■□□□ 1.05
PBX3-202ENST00000373482 TTC14Q96N46 770 aa21.58■■□□□ 1.05
PBX3-202ENST00000373482 UBAC1Q9BSL1 405 aa21.58■■□□□ 1.05
PBX3-202ENST00000373482 FOXN1O15353 648 aa21.57■■□□□ 1.04
PBX3-202ENST00000373482 VCAM1P19320 739 aa21.57■■□□□ 1.04
PBX3-202ENST00000373482 MCCP23508 829 aa21.57■■□□□ 1.04
PBX3-202ENST00000373482 HOXA7P31268 230 aaPredicted RBP21.57■■□□□ 1.04
PBX3-202ENST00000373482 CTCFP49711 727 aaPredicted RBP21.57■■□□□ 1.04
PBX3-202ENST00000373482 IRX3P78415 501 aaPredicted RBP21.57■■□□□ 1.04
PBX3-202ENST00000373482 CRHR2Q13324 411 aa21.57■■□□□ 1.04
PBX3-202ENST00000373482 KRT32Q14532 448 aa21.57■■□□□ 1.04
PBX3-202ENST00000373482 STOX1Q6ZVD7 989 aa21.57■■□□□ 1.04
PBX3-202ENST00000373482 ZKSCAN3Q9BRR0 538 aa21.57■■□□□ 1.04
PBX3-202ENST00000373482 TAF6LQ9Y6J9 622 aa21.57■■□□□ 1.04
PBX3-202ENST00000373482 USP17L15C9J2P7 530 aa21.56■■□□□ 1.04
PBX3-202ENST00000373482 USP17L13C9JLJ4 530 aa21.56■■□□□ 1.04
PBX3-202ENST00000373482 USP17L11C9JVI0 530 aa21.56■■□□□ 1.04
PBX3-202ENST00000373482 USP17L18D6R9N7 530 aa21.56■■□□□ 1.04
PBX3-202ENST00000373482 USP17L22D6RA61 530 aa21.56■■□□□ 1.04
PBX3-202ENST00000373482 USP17L17D6RBQ6 530 aa21.56■■□□□ 1.04
PBX3-202ENST00000373482 USP17L19D6RCP7 530 aa21.56■■□□□ 1.04
PBX3-202ENST00000373482 USP17L20D6RJB6 530 aa21.56■■□□□ 1.04
PBX3-202ENST00000373482 WDR46O15213 610 aaKnown RBP21.56■■□□□ 1.04
PBX3-202ENST00000373482 HSPA4P34932 840 aa21.56■■□□□ 1.04
PBX3-202ENST00000373482 USP17L24Q0WX57 530 aa21.56■■□□□ 1.04
PBX3-202ENST00000373482 SPICE1Q8N0Z3 855 aa21.56■■□□□ 1.04
PBX3-202ENST00000373482 LRRC47Q8N1G4 583 aaKnown RBP21.56■■□□□ 1.04
PBX3-202ENST00000373482 ZSCAN10Q96SZ4 725 aaPredicted RBP21.56■■□□□ 1.04
PBX3-202ENST00000373482 TSKSQ9UJT2 592 aa21.56■■□□□ 1.04
PBX3-202ENST00000373482 ERICH2A1L162 156 aa21.55■■□□□ 1.04
PBX3-202ENST00000373482 TOP1P11387 765 aaKnown RBP21.55■■□□□ 1.04
PBX3-202ENST00000373482 NOVP48745 357 aa21.55■■□□□ 1.04
PBX3-202ENST00000373482 SART3Q15020 963 aaKnown RBP21.55■■□□□ 1.04
PBX3-202ENST00000373482 TSGA10IPQ3SY00 556 aa21.55■■□□□ 1.04
PBX3-202ENST00000373482 DGKHQ86XP1 1220 aa21.55■■□□□ 1.04
PBX3-202ENST00000373482 GMCL1P1Q8NEA9 526 aa21.55■■□□□ 1.04
PBX3-202ENST00000373482 SMCR8Q8TEV9 937 aaPredicted RBP21.55■■□□□ 1.04
PBX3-202ENST00000373482 USP26Q9BXU7 913 aa21.55■■□□□ 1.04
PBX3-202ENST00000373482 TANGO6Q9C0B7 1094 aa21.55■■□□□ 1.04
PBX3-202ENST00000373482 RPAP3Q9H6T3 665 aaPredicted RBP21.55■■□□□ 1.04
PBX3-202ENST00000373482 TNKSO95271 1327 aa21.55■■□□□ 1.04
PBX3-202ENST00000373482 F5H6K3 240 aa21.54■■□□□ 1.04
PBX3-202ENST00000373482 TLR2O60603 784 aa21.54■■□□□ 1.04
PBX3-202ENST00000373482 CYP2C8P10632 490 aa21.54■■□□□ 1.04
PBX3-202ENST00000373482 KLRC3Q07444 240 aa21.54■■□□□ 1.04
PBX3-202ENST00000373482 CATSPERGQ6ZRH7 1159 aa21.54■■□□□ 1.04
PBX3-202ENST00000373482 CYB5R4Q7L1T6 521 aa21.54■■□□□ 1.04
PBX3-202ENST00000373482 NKX2-3Q8TAU0 364 aa21.54■■□□□ 1.04
PBX3-202ENST00000373482 ASCC2Q9H1I8 757 aaPredicted RBP21.54■■□□□ 1.04
PBX3-202ENST00000373482 A0A0G2JMZ2 1700 aa21.54■■□□□ 1.04
PBX3-202ENST00000373482 NDUFB10O96000 172 aa21.53■■□□□ 1.04
PBX3-202ENST00000373482 HSPA8P11142 646 aaKnown RBP21.53■■□□□ 1.04
PBX3-202ENST00000373482 MCM5P33992 734 aa21.53■■□□□ 1.04
PBX3-202ENST00000373482 KIAA1755Q5JYT7 1200 aa21.53■■□□□ 1.04
PBX3-202ENST00000373482 MB21D2Q8IYB1 491 aaPredicted RBP21.53■■□□□ 1.04
PBX3-202ENST00000373482 TMEM47Q9BQJ4 181 aa21.53■■□□□ 1.04
PBX3-202ENST00000373482 DOCK3Q8IZD9 2030 aa21.53■■□□□ 1.04
PBX3-202ENST00000373482 IFIT3O14879 490 aaKnown RBP21.52■■□□□ 1.04
PBX3-202ENST00000373482 NOM1Q5C9Z4 860 aaKnown RBP21.52■■□□□ 1.04
PBX3-202ENST00000373482 SLFN13Q68D06 897 aa21.52■■□□□ 1.04
PBX3-202ENST00000373482 RCSD1Q6JBY9 416 aa21.52■■□□□ 1.04
PBX3-202ENST00000373482 RASEFQ8IZ41 740 aa21.52■■□□□ 1.04
PBX3-202ENST00000373482 ENAHQ8N8S7 591 aaPredicted RBP21.52■■□□□ 1.04
PBX3-202ENST00000373482 GTF3C2Q8WUA4 911 aaPredicted RBP21.52■■□□□ 1.04
PBX3-202ENST00000373482 KCNB2Q92953 911 aa21.52■■□□□ 1.04
PBX3-202ENST00000373482 NEK1Q96PY6 1258 aa21.52■■□□□ 1.04
PBX3-202ENST00000373482 KAT14Q9H8E8 782 aa21.52■■□□□ 1.04
PBX3-202ENST00000373482 ZNFX1Q9P2E3 1918 aaKnown RBP21.51■■□□□ 1.03
PBX3-202ENST00000373482 GPR25O00155 361 aa21.51■■□□□ 1.03
PBX3-202ENST00000373482 HMGB1P09429 215 aaKnown RBP21.51■■□□□ 1.03
PBX3-202ENST00000373482 GCLCP48506 637 aaPredicted RBP21.51■■□□□ 1.03
PBX3-202ENST00000373482 C8orf34Q49A92 452 aa21.51■■□□□ 1.03
PBX3-202ENST00000373482 FAM83BQ5T0W9 1011 aa21.51■■□□□ 1.03
PBX3-202ENST00000373482 IFIT1BQ5T764 474 aaKnown RBP21.51■■□□□ 1.03
PBX3-202ENST00000373482 MTA3Q9BTC8 594 aa21.51■■□□□ 1.03
PBX3-202ENST00000373482 R3HDMLQ9H3Y0 253 aa21.51■■□□□ 1.03
PBX3-202ENST00000373482 ISY1Q9ULR0 285 aaKnown RBP21.51■■□□□ 1.03
PBX3-202ENST00000373482 SNX14Q9Y5W7 946 aa21.51■■□□□ 1.03
PBX3-202ENST00000373482 ZSWIM8A7E2V4 1837 aa21.5■■□□□ 1.03
PBX3-202ENST00000373482 FLOT1O75955 427 aa21.5■■□□□ 1.03
PBX3-202ENST00000373482 SLC1A4P43007 532 aa21.5■■□□□ 1.03
PBX3-202ENST00000373482 LBX1P52954 281 aa21.5■■□□□ 1.03
PBX3-202ENST00000373482 HERVK_113P62684 666 aa21.5■■□□□ 1.03
PBX3-202ENST00000373482 COG2Q14746 738 aa21.5■■□□□ 1.03
PBX3-202ENST00000373482 WTAPQ15007 396 aa21.5■■□□□ 1.03
PBX3-202ENST00000373482 CHST3Q7LGC8 479 aa21.5■■□□□ 1.03
PBX3-202ENST00000373482 ANKS1AQ92625 1134 aa21.5■■□□□ 1.03
PBX3-202ENST00000373482 GMCL1Q96IK5 515 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms