RNA–Protein interactions for RNA: ENST00000373377.1

CSMD2-203, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-203ENST00000373377 TCIRG1Q13488 830 aa11.04□□□□□ -0.64
CSMD2-203ENST00000373377 AKNAD1Q5T1N1 836 aa11.04□□□□□ -0.64
CSMD2-203ENST00000373377 CCDC148Q8NFR7 591 aa11.04□□□□□ -0.64
CSMD2-203ENST00000373377 PANX2Q96RD6 677 aa11.04□□□□□ -0.64
CSMD2-203ENST00000373377 UBXN6Q9BZV1 441 aa11.04□□□□□ -0.64
CSMD2-203ENST00000373377 MYO6Q9UM54 1294 aa11.04□□□□□ -0.64
CSMD2-203ENST00000373377 SPEF2Q9C093 1822 aa11.04□□□□□ -0.64
CSMD2-203ENST00000373377 TRIM49BA6NDI0 452 aa11.04□□□□□ -0.64
CSMD2-203ENST00000373377 KRT31Q15323 416 aa11.04□□□□□ -0.64
CSMD2-203ENST00000373377 MUM1L1Q5H9M0 696 aa11.04□□□□□ -0.64
CSMD2-203ENST00000373377 KIAA1328Q86T90 577 aa11.04□□□□□ -0.64
CSMD2-203ENST00000373377 CNGA4Q8IV77 575 aa11.04□□□□□ -0.64
CSMD2-203ENST00000373377 LCORLQ8N3X6 602 aa11.04□□□□□ -0.64
CSMD2-203ENST00000373377 JADE2Q9NQC1 790 aa11.04□□□□□ -0.64
CSMD2-203ENST00000373377 ADD3Q9UEY8 706 aaKnown RBP11.04□□□□□ -0.64
CSMD2-203ENST00000373377 L1RE1Q9UN81 338 aa11.04□□□□□ -0.64
CSMD2-203ENST00000373377 CEP131Q9UPN4 1083 aa11.04□□□□□ -0.64
CSMD2-203ENST00000373377 MYH3P11055 1940 aa11.04□□□□□ -0.64
CSMD2-203ENST00000373377 MAP2K7O14733 419 aa11.03□□□□□ -0.64
CSMD2-203ENST00000373377 RNF40O75150 1001 aa11.03□□□□□ -0.64
CSMD2-203ENST00000373377 IFNAR1P17181 557 aa11.03□□□□□ -0.64
CSMD2-203ENST00000373377 TSR1Q2NL82 804 aaKnown RBP11.03□□□□□ -0.64
CSMD2-203ENST00000373377 ZNF654Q8IZM8 581 aa11.03□□□□□ -0.64
CSMD2-203ENST00000373377 FBXL16Q8N461 479 aa11.03□□□□□ -0.64
CSMD2-203ENST00000373377 FANCBQ8NB91 859 aa11.03□□□□□ -0.64
CSMD2-203ENST00000373377 ANKRD20A12PQ8NF67 263 aa11.03□□□□□ -0.64
CSMD2-203ENST00000373377 GDAQ9Y2T3 454 aa11.03□□□□□ -0.64
CSMD2-203ENST00000373377 SRPRBQ9Y5M8 271 aaKnown RBP11.03□□□□□ -0.64
CSMD2-203ENST00000373377 ARAP2Q8WZ64 1704 aa11.03□□□□□ -0.64
CSMD2-203ENST00000373377 LRP5O75197 1615 aa11.03□□□□□ -0.64
CSMD2-203ENST00000373377 IRS4O14654 1257 aaPredicted RBP11.03□□□□□ -0.64
CSMD2-203ENST00000373377 DEXIO95424 95 aa11.03□□□□□ -0.64
CSMD2-203ENST00000373377 MAP3K12Q12852 859 aa11.03□□□□□ -0.64
CSMD2-203ENST00000373377 CCDC122Q5T0U0 273 aa11.03□□□□□ -0.64
CSMD2-203ENST00000373377 KANK3Q6NY19 840 aa11.03□□□□□ -0.64
CSMD2-203ENST00000373377 CTR9Q6PD62 1173 aa11.03□□□□□ -0.64
CSMD2-203ENST00000373377 CRACR2BQ8N4Y2 399 aaPredicted RBP11.03□□□□□ -0.64
CSMD2-203ENST00000373377 TTLL11Q8NHH1 800 aa11.03□□□□□ -0.64
CSMD2-203ENST00000373377 ZCRB1Q8TBF4 217 aaKnown RBP11.03□□□□□ -0.64
CSMD2-203ENST00000373377 CARD10Q9BWT7 1032 aa11.03□□□□□ -0.64
CSMD2-203ENST00000373377 LAMB2P55268 1798 aa11.03□□□□□ -0.64
CSMD2-203ENST00000373377 ZNF831Q5JPB2 1677 aa11.03□□□□□ -0.64
CSMD2-203ENST00000373377 ZNF185O15231 689 aa11.03□□□□□ -0.64
CSMD2-203ENST00000373377 SARSP49591 514 aaKnown RBP11.03□□□□□ -0.64
CSMD2-203ENST00000373377 PTGDRQ13258 359 aa11.03□□□□□ -0.64
CSMD2-203ENST00000373377 CUL4BQ13620 913 aa11.03□□□□□ -0.64
CSMD2-203ENST00000373377 TTF1Q15361 905 aaPredicted RBP11.03□□□□□ -0.64
CSMD2-203ENST00000373377 IPO4Q8TEX9 1081 aaKnown RBP11.03□□□□□ -0.64
CSMD2-203ENST00000373377 SMARCC1Q92922 1105 aaPredicted RBP11.03□□□□□ -0.64
CSMD2-203ENST00000373377 ABHD10Q9NUJ1 306 aa11.03□□□□□ -0.64
CSMD2-203ENST00000373377 GNL3LQ9NVN8 582 aaKnown RBP11.03□□□□□ -0.64
CSMD2-203ENST00000373377 NWD2Q9ULI1 1742 aa11.02□□□□□ -0.64
CSMD2-203ENST00000373377 PATL2C9JE40 543 aaKnown RBP11.02□□□□□ -0.64
CSMD2-203ENST00000373377 PLEKHA8P1O95397 391 aa11.02□□□□□ -0.64
CSMD2-203ENST00000373377 PIP4K2BP78356 416 aa11.02□□□□□ -0.64
CSMD2-203ENST00000373377 PIK3AP1Q6ZUJ8 805 aa11.02□□□□□ -0.64
CSMD2-203ENST00000373377 NELFBQ8WX92 580 aa11.02□□□□□ -0.64
CSMD2-203ENST00000373377 MMS19Q96T76 1030 aa11.02□□□□□ -0.64
CSMD2-203ENST00000373377 CRACR2AQ9BSW2 395 aa11.02□□□□□ -0.64
CSMD2-203ENST00000373377 NACAP1Q9BZK3 213 aa11.02□□□□□ -0.64
CSMD2-203ENST00000373377 PRDM11Q9NQV5 511 aa11.02□□□□□ -0.64
CSMD2-203ENST00000373377 EIF3CLB5ME19 914 aaKnown RBP11.02□□□□□ -0.65
CSMD2-203ENST00000373377 ATP1A1P05023 1023 aaKnown RBP11.02□□□□□ -0.65
CSMD2-203ENST00000373377 XBP1P17861 261 aa11.02□□□□□ -0.65
CSMD2-203ENST00000373377 ERCC5P28715 1186 aaPredicted RBP11.02□□□□□ -0.65
CSMD2-203ENST00000373377 BCAMP50895 628 aa11.02□□□□□ -0.65
CSMD2-203ENST00000373377 EIF5P55010 431 aaKnown RBP11.02□□□□□ -0.65
CSMD2-203ENST00000373377 CYP27A1Q02318 531 aa11.02□□□□□ -0.65
CSMD2-203ENST00000373377 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.02□□□□□ -0.65
CSMD2-203ENST00000373377 SPATA5Q8NB90 893 aa11.02□□□□□ -0.65
CSMD2-203ENST00000373377 CTAGE1Q96RT6 745 aa11.02□□□□□ -0.65
CSMD2-203ENST00000373377 EIF3CQ99613 913 aaKnown RBP11.02□□□□□ -0.65
CSMD2-203ENST00000373377 ACBD3Q9H3P7 528 aa11.02□□□□□ -0.65
CSMD2-203ENST00000373377 ASAP1Q9ULH1 1129 aa11.02□□□□□ -0.65
CSMD2-203ENST00000373377 TTF2Q9UNY4 1162 aaKnown RBP11.02□□□□□ -0.65
CSMD2-203ENST00000373377 COL5A3P25940 1745 aaPredicted RBP11.02□□□□□ -0.65
CSMD2-203ENST00000373377 KCNJ18B7U540 433 aa11.01□□□□□ -0.65
CSMD2-203ENST00000373377 IVLP07476 585 aa11.01□□□□□ -0.65
CSMD2-203ENST00000373377 RASGRF1Q13972 1273 aa11.01□□□□□ -0.65
CSMD2-203ENST00000373377 KCNJ12Q14500 433 aa11.01□□□□□ -0.65
CSMD2-203ENST00000373377 CYP26C1Q6V0L0 522 aa11.01□□□□□ -0.65
CSMD2-203ENST00000373377 RASGRP2Q7LDG7 609 aa11.01□□□□□ -0.65
CSMD2-203ENST00000373377 MICALL1Q8N3F8 863 aa11.01□□□□□ -0.65
CSMD2-203ENST00000373377 FOXP1Q9H334 677 aaPredicted RBP11.01□□□□□ -0.65
CSMD2-203ENST00000373377 RIPOR2Q9Y4F9 1068 aa11.01□□□□□ -0.65
CSMD2-203ENST00000373377 NUP98P52948 1817 aa11.01□□□□□ -0.65
CSMD2-203ENST00000373377 ERVV-2B6SEH9 535 aa11.01□□□□□ -0.65
CSMD2-203ENST00000373377 POTEB2H3BUK9 544 aa11.01□□□□□ -0.65
CSMD2-203ENST00000373377 MYO1BO43795 1136 aa11.01□□□□□ -0.65
CSMD2-203ENST00000373377 PDE8BO95263 885 aa11.01□□□□□ -0.65
CSMD2-203ENST00000373377 KRT2P35908 639 aa11.01□□□□□ -0.65
CSMD2-203ENST00000373377 GTF2A1P52655 376 aaPredicted RBP11.01□□□□□ -0.65
CSMD2-203ENST00000373377 E2F4Q16254 413 aa11.01□□□□□ -0.65
CSMD2-203ENST00000373377 TTC31Q49AM3 519 aaPredicted RBP11.01□□□□□ -0.65
CSMD2-203ENST00000373377 TMTC1Q8IUR5 882 aa11.01□□□□□ -0.65
CSMD2-203ENST00000373377 AFAP1L1Q8TED9 768 aa11.01□□□□□ -0.65
CSMD2-203ENST00000373377 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.01□□□□□ -0.65
CSMD2-203ENST00000373377 KRT23Q9C075 422 aa11.01□□□□□ -0.65
CSMD2-203ENST00000373377 EPN1Q9Y6I3 576 aaPredicted RBP11.01□□□□□ -0.65
CSMD2-203ENST00000373377 TNKSO95271 1327 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms