RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 KANSL2Q9H9L4 492 aa11.26□□□□□ -0.61
TMEM254-201ENST00000372273 ZSWIM5Q9P217 1185 aa11.26□□□□□ -0.61
TMEM254-201ENST00000372273 DNAH12Q6ZR08 3092 aa11.25□□□□□ -0.61
TMEM254-201ENST00000372273 ZMYM6O95789 1325 aa11.25□□□□□ -0.61
TMEM254-201ENST00000372273 IGKV6D-41A0A0C4DH26 115 aa11.25□□□□□ -0.61
TMEM254-201ENST00000372273 RASEFQ8IZ41 740 aa11.25□□□□□ -0.61
TMEM254-201ENST00000372273 NEDD1Q8NHV4 660 aa11.25□□□□□ -0.61
TMEM254-201ENST00000372273 CTNNA3Q9UI47 895 aa11.25□□□□□ -0.61
TMEM254-201ENST00000372273 AGTPBP1Q9UPW5 1226 aa11.25□□□□□ -0.61
TMEM254-201ENST00000372273 E7EWF7 191 aa11.24□□□□□ -0.61
TMEM254-201ENST00000372273 NECTIN1Q15223 517 aa11.24□□□□□ -0.61
TMEM254-201ENST00000372273 COL13A1Q5TAT6 717 aaPredicted RBP11.24□□□□□ -0.61
TMEM254-201ENST00000372273 CYB5R4Q7L1T6 521 aa11.24□□□□□ -0.61
TMEM254-201ENST00000372273 FASTKD5Q7L8L6 764 aaKnown RBP11.24□□□□□ -0.61
TMEM254-201ENST00000372273 ZNF296Q8WUU4 475 aaPredicted RBP11.24□□□□□ -0.61
TMEM254-201ENST00000372273 P2RX7Q99572 595 aaKnown RBP11.24□□□□□ -0.61
TMEM254-201ENST00000372273 ARHGAP39Q9C0H5 1083 aa11.24□□□□□ -0.61
TMEM254-201ENST00000372273 KIAA1683Q9H0B3 1180 aa11.24□□□□□ -0.61
TMEM254-201ENST00000372273 ZNF287Q9HBT7 754 aa11.24□□□□□ -0.61
TMEM254-201ENST00000372273 SENP2Q9HC62 589 aa11.24□□□□□ -0.61
TMEM254-201ENST00000372273 GPHNQ9NQX3 736 aaPredicted RBP11.24□□□□□ -0.61
TMEM254-201ENST00000372273 FBXO28Q9NVF7 368 aa11.24□□□□□ -0.61
TMEM254-201ENST00000372273 TMOD4Q9NZQ9 345 aa11.24□□□□□ -0.61
TMEM254-201ENST00000372273 TMX2Q9Y320 296 aa11.24□□□□□ -0.61
TMEM254-201ENST00000372273 DOCK1Q14185 1865 aa11.24□□□□□ -0.61
TMEM254-201ENST00000372273 SLC27A2O14975 620 aa11.24□□□□□ -0.61
TMEM254-201ENST00000372273 CA12O43570 354 aa11.24□□□□□ -0.61
TMEM254-201ENST00000372273 ORC4O43929 436 aa11.24□□□□□ -0.61
TMEM254-201ENST00000372273 PRKCSHP14314 528 aaPredicted RBP11.24□□□□□ -0.61
TMEM254-201ENST00000372273 ADCK5Q3MIX3 580 aa11.24□□□□□ -0.61
TMEM254-201ENST00000372273 SH3D19Q5HYK7 790 aa11.24□□□□□ -0.61
TMEM254-201ENST00000372273 CREB3L3Q68CJ9 461 aa11.24□□□□□ -0.61
TMEM254-201ENST00000372273 OTUD7BQ6GQQ9 843 aa11.24□□□□□ -0.61
TMEM254-201ENST00000372273 ANKRD23Q86SG2 305 aa11.24□□□□□ -0.61
TMEM254-201ENST00000372273 ANKRD13CQ8N6S4 541 aa11.24□□□□□ -0.61
TMEM254-201ENST00000372273 TCEANC2Q96MN5 208 aa11.24□□□□□ -0.61
TMEM254-201ENST00000372273 ASCC2Q9H1I8 757 aaPredicted RBP11.24□□□□□ -0.61
TMEM254-201ENST00000372273 RPAP3Q9H6T3 665 aaPredicted RBP11.24□□□□□ -0.61
TMEM254-201ENST00000372273 TXNRD2Q9NNW7 524 aa11.24□□□□□ -0.61
TMEM254-201ENST00000372273 FOXD4L1Q9NU39 408 aa11.24□□□□□ -0.61
TMEM254-201ENST00000372273 U3KPZ7 1027 aaPredicted RBP11.24□□□□□ -0.61
TMEM254-201ENST00000372273 C19orf81C9J6K1 198 aa11.23□□□□□ -0.61
TMEM254-201ENST00000372273 CPA1P15085 419 aa11.23□□□□□ -0.61
TMEM254-201ENST00000372273 L1TD1Q5T7N2 865 aaKnown RBP11.23□□□□□ -0.61
TMEM254-201ENST00000372273 RCSD1Q6JBY9 416 aa11.23□□□□□ -0.61
TMEM254-201ENST00000372273 PROCA1Q8NCQ7 364 aaPredicted RBP11.23□□□□□ -0.61
TMEM254-201ENST00000372273 SMCR8Q8TEV9 937 aaPredicted RBP11.23□□□□□ -0.61
TMEM254-201ENST00000372273 LRRC2Q9BYS8 371 aa11.23□□□□□ -0.61
TMEM254-201ENST00000372273 TANGO6Q9C0B7 1094 aa11.23□□□□□ -0.61
TMEM254-201ENST00000372273 PHIPQ8WWQ0 1821 aa11.23□□□□□ -0.61
TMEM254-201ENST00000372273 F5H6K3 240 aa11.23□□□□□ -0.61
TMEM254-201ENST00000372273 GOLGA6L22H0YM25 854 aa11.23□□□□□ -0.61
TMEM254-201ENST00000372273 GPR25O00155 361 aa11.23□□□□□ -0.61
TMEM254-201ENST00000372273 TLR2O60603 784 aa11.23□□□□□ -0.61
TMEM254-201ENST00000372273 TTLL1O95922 423 aa11.23□□□□□ -0.61
TMEM254-201ENST00000372273 CTGFP29279 349 aa11.23□□□□□ -0.61
TMEM254-201ENST00000372273 KLRC3Q07444 240 aa11.23□□□□□ -0.61
TMEM254-201ENST00000372273 FAM83BQ5T0W9 1011 aa11.23□□□□□ -0.61
TMEM254-201ENST00000372273 USP17L2Q6R6M4 530 aa11.23□□□□□ -0.61
TMEM254-201ENST00000372273 TNPO1Q92973 898 aaKnown RBP11.23□□□□□ -0.61
TMEM254-201ENST00000372273 ARHGEF10LQ9HCE6 1279 aa11.23□□□□□ -0.61
TMEM254-201ENST00000372273 THSD7BQ9C0I4 1608 aa11.22□□□□□ -0.61
TMEM254-201ENST00000372273 ATAD5Q96QE3 1844 aa11.22□□□□□ -0.61
TMEM254-201ENST00000372273 EPB41L2O43491 1005 aaKnown RBP11.22□□□□□ -0.61
TMEM254-201ENST00000372273 TRAK2O60296 914 aa11.22□□□□□ -0.61
TMEM254-201ENST00000372273 NDUFB10O96000 172 aa11.22□□□□□ -0.61
TMEM254-201ENST00000372273 CTCFP49711 727 aaPredicted RBP11.22□□□□□ -0.61
TMEM254-201ENST00000372273 ESR2Q92731 530 aa11.22□□□□□ -0.61
TMEM254-201ENST00000372273 TMEM47Q9BQJ4 181 aa11.22□□□□□ -0.61
TMEM254-201ENST00000372273 RNF41Q9H4P4 317 aaPredicted RBP11.22□□□□□ -0.61
TMEM254-201ENST00000372273 VCPKMTQ9H867 229 aa11.22□□□□□ -0.61
TMEM254-201ENST00000372273 ZFYVE28Q9HCC9 887 aa11.22□□□□□ -0.61
TMEM254-201ENST00000372273 ISY1Q9ULR0 285 aaKnown RBP11.22□□□□□ -0.61
TMEM254-201ENST00000372273 ALDH1A1P00352 501 aa11.21□□□□□ -0.61
TMEM254-201ENST00000372273 MCM2P49736 904 aa11.21□□□□□ -0.61
TMEM254-201ENST00000372273 IRX3P78415 501 aaPredicted RBP11.21□□□□□ -0.61
TMEM254-201ENST00000372273 Q3C1V9 767 aa11.21□□□□□ -0.61
TMEM254-201ENST00000372273 KCTD1Q719H9 257 aa11.21□□□□□ -0.61
TMEM254-201ENST00000372273 REM2Q8IYK8 340 aaPredicted RBP11.21□□□□□ -0.61
TMEM254-201ENST00000372273 ENAHQ8N8S7 591 aaPredicted RBP11.21□□□□□ -0.61
TMEM254-201ENST00000372273 CPVLQ9H3G5 476 aa11.21□□□□□ -0.61
TMEM254-201ENST00000372273 CWC22Q9HCG8 908 aaKnown RBP11.21□□□□□ -0.61
TMEM254-201ENST00000372273 GINM1Q9NU53 330 aa11.21□□□□□ -0.61
TMEM254-201ENST00000372273 SAGE1Q9NXZ1 904 aa11.21□□□□□ -0.61
TMEM254-201ENST00000372273 NYAP2Q9P242 653 aa11.21□□□□□ -0.61
TMEM254-201ENST00000372273 FLOT1O75955 427 aa11.21□□□□□ -0.62
TMEM254-201ENST00000372273 GOLGA8HP0CJ92 632 aa11.21□□□□□ -0.62
TMEM254-201ENST00000372273 USP14P54578 494 aa11.21□□□□□ -0.62
TMEM254-201ENST00000372273 ANTXR2P58335 489 aa11.21□□□□□ -0.62
TMEM254-201ENST00000372273 ANAPC15P60006 121 aa11.21□□□□□ -0.62
TMEM254-201ENST00000372273 SNAP25P60880 206 aa11.21□□□□□ -0.62
TMEM254-201ENST00000372273 HERVK_113P62684 666 aa11.21□□□□□ -0.62
TMEM254-201ENST00000372273 NUCB2P80303 420 aa11.21□□□□□ -0.62
TMEM254-201ENST00000372273 CATSPERGQ6ZRH7 1159 aa11.21□□□□□ -0.62
TMEM254-201ENST00000372273 CD99L2Q8TCZ2 262 aa11.21□□□□□ -0.62
TMEM254-201ENST00000372273 PAGR1Q9BTK6 254 aa11.21□□□□□ -0.62
TMEM254-201ENST00000372273 TNKSO95271 1327 aa11.2□□□□□ -0.62
TMEM254-201ENST00000372273 CASP8AP2Q9UKL3 1982 aa11.2□□□□□ -0.62
TMEM254-201ENST00000372273 LAMB1P07942 1786 aa11.2□□□□□ -0.62
TMEM254-201ENST00000372273 HOXA7P31268 230 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms