RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 UPF2Q9HAU5 1272 aaKnown RBP19.2■□□□□ 0.66
TMEM53-203ENST00000372242 SENP2Q9HC62 589 aa19.2■□□□□ 0.66
TMEM53-203ENST00000372242 MTMR7Q9Y216 660 aa19.2■□□□□ 0.66
TMEM53-203ENST00000372242 EXOSC10Q01780 885 aaKnown RBP19.19■□□□□ 0.66
TMEM53-203ENST00000372242 SEC23AQ15436 765 aa19.19■□□□□ 0.66
TMEM53-203ENST00000372242 TMEM67Q5HYA8 995 aa19.19■□□□□ 0.66
TMEM53-203ENST00000372242 TREML2Q5T2D2 321 aa19.19■□□□□ 0.66
TMEM53-203ENST00000372242 BLOC1S2Q6QNY1 142 aa19.19■□□□□ 0.66
TMEM53-203ENST00000372242 USP17L2Q6R6M4 530 aa19.19■□□□□ 0.66
TMEM53-203ENST00000372242 DHX32Q7L7V1 743 aaKnown RBP19.19■□□□□ 0.66
TMEM53-203ENST00000372242 DGKHQ86XP1 1220 aa19.19■□□□□ 0.66
TMEM53-203ENST00000372242 IGDCC4Q8TDY8 1250 aa19.19■□□□□ 0.66
TMEM53-203ENST00000372242 TTC14Q96N46 770 aa19.19■□□□□ 0.66
TMEM53-203ENST00000372242 UPF3BQ9BZI7 483 aaKnown RBP19.19■□□□□ 0.66
TMEM53-203ENST00000372242 VCPKMTQ9H867 229 aa19.19■□□□□ 0.66
TMEM53-203ENST00000372242 TMOD4Q9NZQ9 345 aa19.19■□□□□ 0.66
TMEM53-203ENST00000372242 TESPA1A2RU30 521 aaPredicted RBP19.18■□□□□ 0.66
TMEM53-203ENST00000372242 F5H6K3 240 aa19.18■□□□□ 0.66
TMEM53-203ENST00000372242 IGF2BP3O00425 579 aaKnown RBP eCLIP19.18■□□□□ 0.66
TMEM53-203ENST00000372242 HMGB1P09429 215 aaKnown RBP19.18■□□□□ 0.66
TMEM53-203ENST00000372242 PSMA5P28066 241 aa19.18■□□□□ 0.66
TMEM53-203ENST00000372242 USP14P54578 494 aa19.18■□□□□ 0.66
TMEM53-203ENST00000372242 ANAPC15P60006 121 aa19.18■□□□□ 0.66
TMEM53-203ENST00000372242 KLRC3Q07444 240 aa19.18■□□□□ 0.66
TMEM53-203ENST00000372242 SART3Q15020 963 aaKnown RBP19.18■□□□□ 0.66
TMEM53-203ENST00000372242 PPP4R3BQ5MIZ7 849 aa19.18■□□□□ 0.66
TMEM53-203ENST00000372242 FASTKD5Q7L8L6 764 aaKnown RBP19.18■□□□□ 0.66
TMEM53-203ENST00000372242 ERICH2A1L162 156 aa19.18■□□□□ 0.66
TMEM53-203ENST00000372242 BTBD19C9JJ37 291 aa19.18■□□□□ 0.66
TMEM53-203ENST00000372242 TOP1P11387 765 aaKnown RBP19.18■□□□□ 0.66
TMEM53-203ENST00000372242 SREBF2Q12772 1141 aa19.18■□□□□ 0.66
TMEM53-203ENST00000372242 CCDC178Q5BJE1 867 aa19.18■□□□□ 0.66
TMEM53-203ENST00000372242 IFIT1BQ5T764 474 aaKnown RBP19.18■□□□□ 0.66
TMEM53-203ENST00000372242 GPAT2Q6NUI2 795 aa19.18■□□□□ 0.66
TMEM53-203ENST00000372242 RASGRP2Q7LDG7 609 aa19.18■□□□□ 0.66
TMEM53-203ENST00000372242 FAM43AQ8N2R8 423 aa19.18■□□□□ 0.66
TMEM53-203ENST00000372242 PROCA1Q8NCQ7 364 aaPredicted RBP19.18■□□□□ 0.66
TMEM53-203ENST00000372242 GOPCQ9HD26 462 aa19.18■□□□□ 0.66
TMEM53-203ENST00000372242 VCAM1P19320 739 aa19.17■□□□□ 0.66
TMEM53-203ENST00000372242 RPS6KB1P23443 525 aa19.17■□□□□ 0.66
TMEM53-203ENST00000372242 TM4SF4P48230 202 aa19.17■□□□□ 0.66
TMEM53-203ENST00000372242 INHBEP58166 350 aa19.17■□□□□ 0.66
TMEM53-203ENST00000372242 WTAPQ15007 396 aa19.17■□□□□ 0.66
TMEM53-203ENST00000372242 IFNL1Q8IU54 200 aa19.17■□□□□ 0.66
TMEM53-203ENST00000372242 ANKS1AQ92625 1134 aa19.17■□□□□ 0.66
TMEM53-203ENST00000372242 C12orf42Q96LP6 360 aa19.17■□□□□ 0.66
TMEM53-203ENST00000372242 NUP88Q99567 741 aaPredicted RBP19.17■□□□□ 0.66
TMEM53-203ENST00000372242 ZSWIM6Q9HCJ5 1215 aa19.17■□□□□ 0.66
TMEM53-203ENST00000372242 LOC285556D6RIA3 1793 aa19.17■□□□□ 0.66
TMEM53-203ENST00000372242 THSD7BQ9C0I4 1608 aa19.17■□□□□ 0.66
TMEM53-203ENST00000372242 NDUFB10O96000 172 aa19.16■□□□□ 0.66
TMEM53-203ENST00000372242 RBM25P49756 843 aaKnown RBP19.16■□□□□ 0.66
TMEM53-203ENST00000372242 RUFY3Q7L099 469 aa19.16■□□□□ 0.66
TMEM53-203ENST00000372242 TMEM87BQ96K49 555 aa19.16■□□□□ 0.66
TMEM53-203ENST00000372242 TM6SF1Q9BZW5 370 aa19.16■□□□□ 0.66
TMEM53-203ENST00000372242 KAT14Q9H8E8 782 aa19.16■□□□□ 0.66
TMEM53-203ENST00000372242 LY9Q9HBG7 655 aa19.16■□□□□ 0.66
TMEM53-203ENST00000372242 AGTPBP1Q9UPW5 1226 aa19.16■□□□□ 0.66
TMEM53-203ENST00000372242 SH2B2O14492 632 aaPredicted RBP19.16■□□□□ 0.66
TMEM53-203ENST00000372242 PNMA1Q8ND90 353 aa19.16■□□□□ 0.66
TMEM53-203ENST00000372242 GMCL1P1Q8NEA9 526 aa19.16■□□□□ 0.66
TMEM53-203ENST00000372242 CYP46A1Q9Y6A2 500 aa19.16■□□□□ 0.66
TMEM53-203ENST00000372242 PDHXO00330 501 aa19.15■□□□□ 0.66
TMEM53-203ENST00000372242 SLFN13Q68D06 897 aa19.15■□□□□ 0.66
TMEM53-203ENST00000372242 LPAR1Q92633 364 aa19.15■□□□□ 0.66
TMEM53-203ENST00000372242 IL17RAQ96F46 866 aa19.15■□□□□ 0.66
TMEM53-203ENST00000372242 KIF2CQ99661 725 aa19.15■□□□□ 0.66
TMEM53-203ENST00000372242 RPAP3Q9H6T3 665 aaPredicted RBP19.15■□□□□ 0.66
TMEM53-203ENST00000372242 SYNPO2Q9UMS6 1093 aa19.15■□□□□ 0.66
TMEM53-203ENST00000372242 WDR19Q8NEZ3 1342 aa19.15■□□□□ 0.66
TMEM53-203ENST00000372242 FGD1P98174 961 aa19.14■□□□□ 0.65
TMEM53-203ENST00000372242 FAM83BQ5T0W9 1011 aa19.14■□□□□ 0.65
TMEM53-203ENST00000372242 ANKRD23Q86SG2 305 aa19.14■□□□□ 0.65
TMEM53-203ENST00000372242 TBC1D32Q96NH3 1257 aa19.14■□□□□ 0.65
TMEM53-203ENST00000372242 MTA3Q9BTC8 594 aa19.14■□□□□ 0.65
TMEM53-203ENST00000372242 NFXL1Q6ZNB6 911 aa19.14■□□□□ 0.65
TMEM53-203ENST00000372242 Q6ZUG5 572 aa19.14■□□□□ 0.65
TMEM53-203ENST00000372242 REM2Q8IYK8 340 aaPredicted RBP19.14■□□□□ 0.65
TMEM53-203ENST00000372242 TANGO6Q9C0B7 1094 aa19.14■□□□□ 0.65
TMEM53-203ENST00000372242 ISY1Q9ULR0 285 aaKnown RBP19.13■□□□□ 0.65
TMEM53-203ENST00000372242 WDR46O15213 610 aaKnown RBP19.12■□□□□ 0.65
TMEM53-203ENST00000372242 CYP2C8P10632 490 aa19.12■□□□□ 0.65
TMEM53-203ENST00000372242 LIFRP42702 1097 aa19.12■□□□□ 0.65
TMEM53-203ENST00000372242 SLC1A4P43007 532 aa19.12■□□□□ 0.65
TMEM53-203ENST00000372242 OTUD7BQ6GQQ9 843 aa19.12■□□□□ 0.65
TMEM53-203ENST00000372242 SAMD1Q6SPF0 538 aaPredicted RBP19.12■□□□□ 0.65
TMEM53-203ENST00000372242 KCTD1Q719H9 257 aa19.12■□□□□ 0.65
TMEM53-203ENST00000372242 MYL10Q9BUA6 226 aa19.12■□□□□ 0.65
TMEM53-203ENST00000372242 CCDC69A6NI79 296 aa19.11■□□□□ 0.65
TMEM53-203ENST00000372242 PDHBP11177 359 aa19.11■□□□□ 0.65
TMEM53-203ENST00000372242 HOXA7P31268 230 aaPredicted RBP19.11■□□□□ 0.65
TMEM53-203ENST00000372242 BRF1Q92994 677 aa19.11■□□□□ 0.65
TMEM53-203ENST00000372242 GMCL1Q96IK5 515 aa19.11■□□□□ 0.65
TMEM53-203ENST00000372242 LARP6Q9BRS8 491 aaKnown RBP19.11■□□□□ 0.65
TMEM53-203ENST00000372242 ASCC2Q9H1I8 757 aaPredicted RBP19.11■□□□□ 0.65
TMEM53-203ENST00000372242 PDRG1Q9NUG6 133 aa19.11■□□□□ 0.65
TMEM53-203ENST00000372242 FBXO28Q9NVF7 368 aa19.11■□□□□ 0.65
TMEM53-203ENST00000372242 FRMPD2Q68DX3 1309 aaPredicted RBP19.11■□□□□ 0.65
TMEM53-203ENST00000372242 USP17L15C9J2P7 530 aa19.11■□□□□ 0.65
TMEM53-203ENST00000372242 USP17L13C9JLJ4 530 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms