RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 HDXQ7Z353 690 aa10.03□□□□□ -0.8
ATG4A-203ENST00000372232 TMX4Q9H1E5 349 aaPredicted RBP10.03□□□□□ -0.8
ATG4A-203ENST00000372232 BOLA2Q9H3K6 86 aa10.03□□□□□ -0.8
ATG4A-203ENST00000372232 SEPT3Q9UH03 358 aa10.03□□□□□ -0.8
ATG4A-203ENST00000372232 AHDC1Q5TGY3 1603 aaPredicted RBP10.03□□□□□ -0.8
ATG4A-203ENST00000372232 MRPL58Q14197 206 aaKnown RBP10.02□□□□□ -0.8
ATG4A-203ENST00000372232 OCLNQ16625 522 aa10.02□□□□□ -0.8
ATG4A-203ENST00000372232 SWI5Q1ZZU3 235 aa10.02□□□□□ -0.8
ATG4A-203ENST00000372232 VPS53Q5VIR6 699 aa10.02□□□□□ -0.8
ATG4A-203ENST00000372232 DDX54Q8TDD1 881 aaKnown RBP10.02□□□□□ -0.8
ATG4A-203ENST00000372232 FAM227BQ96M60 508 aa10.02□□□□□ -0.8
ATG4A-203ENST00000372232 MKNK1Q9BUB5 465 aa10.02□□□□□ -0.8
ATG4A-203ENST00000372232 OSBPL5Q9H0X9 879 aaPredicted RBP10.02□□□□□ -0.8
ATG4A-203ENST00000372232 ACBD3Q9H3P7 528 aa10.02□□□□□ -0.8
ATG4A-203ENST00000372232 PLEKHA4Q9H4M7 779 aa10.02□□□□□ -0.8
ATG4A-203ENST00000372232 H7C1W4 665 aa10.02□□□□□ -0.81
ATG4A-203ENST00000372232 CCP110O43303 1012 aa10.02□□□□□ -0.81
ATG4A-203ENST00000372232 F13A1P00488 732 aa10.02□□□□□ -0.81
ATG4A-203ENST00000372232 A1BGP04217 495 aa10.02□□□□□ -0.81
ATG4A-203ENST00000372232 INPP5BP32019 993 aa10.02□□□□□ -0.81
ATG4A-203ENST00000372232 FNTAP49354 379 aa10.02□□□□□ -0.81
ATG4A-203ENST00000372232 ZNF165P49910 485 aa10.02□□□□□ -0.81
ATG4A-203ENST00000372232 AK2P54819 239 aa10.02□□□□□ -0.81
ATG4A-203ENST00000372232 NMIQ13287 307 aaPredicted RBP10.02□□□□□ -0.81
ATG4A-203ENST00000372232 NECTIN1Q15223 517 aa10.02□□□□□ -0.81
ATG4A-203ENST00000372232 TNNI3KQ59H18 835 aa10.02□□□□□ -0.81
ATG4A-203ENST00000372232 CDCA2Q69YH5 1023 aaPredicted RBP10.02□□□□□ -0.81
ATG4A-203ENST00000372232 TSHZ1Q6ZSZ6 1077 aa10.02□□□□□ -0.81
ATG4A-203ENST00000372232 TTLL7Q6ZT98 887 aa10.02□□□□□ -0.81
ATG4A-203ENST00000372232 EPC1Q9H2F5 836 aa10.02□□□□□ -0.81
ATG4A-203ENST00000372232 CD248Q9HCU0 757 aa10.02□□□□□ -0.81
ATG4A-203ENST00000372232 STRN4Q9NRL3 753 aa10.02□□□□□ -0.81
ATG4A-203ENST00000372232 LIMCH1Q9UPQ0 1083 aa10.02□□□□□ -0.81
ATG4A-203ENST00000372232 SMC3Q9UQE7 1217 aa10.02□□□□□ -0.81
ATG4A-203ENST00000372232 PARP3Q9Y6F1 533 aa10.02□□□□□ -0.81
ATG4A-203ENST00000372232 FPGT-TNNI3KV9GXZ4 949 aa10.02□□□□□ -0.81
ATG4A-203ENST00000372232 NHSL1Q5SYE7 1610 aa10.02□□□□□ -0.81
ATG4A-203ENST00000372232 NRDCO43847 1150 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 GCKP35557 465 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 EVA1CP58658 441 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 ARHGAP4P98171 946 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 TFCP2Q12800 502 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 BEND6Q5SZJ8 279 aaPredicted RBP10.01□□□□□ -0.81
ATG4A-203ENST00000372232 PRPF40BQ6NWY9 871 aaKnown RBP10.01□□□□□ -0.81
ATG4A-203ENST00000372232 RUFY3Q7L099 469 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 RPUSD2Q8IZ73 545 aaKnown RBP10.01□□□□□ -0.81
ATG4A-203ENST00000372232 MAP4K1Q92918 833 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 CLIC6Q96NY7 704 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 TM6SF1Q9BZW5 370 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 RNF19AQ9NV58 838 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 CHCHD3Q9NX63 227 aaKnown RBP10.01□□□□□ -0.81
ATG4A-203ENST00000372232 DBNLQ9UJU6 430 aaKnown RBP10.01□□□□□ -0.81
ATG4A-203ENST00000372232 KCPQ6ZWJ8 1503 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 FSBPO95073 299 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 SETSIPP0DME0 302 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 ABCD1P33897 745 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 USP5P45974 858 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 RAB27AP51159 221 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 CLNS1AP54105 237 aaKnown RBP10.01□□□□□ -0.81
ATG4A-203ENST00000372232 SLC8A3P57103 927 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 FOXO4P98177 505 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 ADCK5Q3MIX3 580 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 EAPPQ56P03 285 aaPredicted RBP10.01□□□□□ -0.81
ATG4A-203ENST00000372232 ASTLQ6HA08 431 aaPredicted RBP10.01□□□□□ -0.81
ATG4A-203ENST00000372232 RCSD1Q6JBY9 416 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 TLDC1Q6P9B6 456 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 TRIM65Q6PJ69 517 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 LMBR1LQ6UX01 489 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 PARD3BQ8TEW8 1205 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 FSD1Q9BTV5 496 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 KIF9Q9HAQ2 790 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 ZSWIM6Q9HCJ5 1215 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 HOMER3Q9NSC5 361 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 IMPACTQ9P2X3 320 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 DCTN4Q9UJW0 460 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 IQSEC3Q9UPP2 1182 aaPredicted RBP10.01□□□□□ -0.81
ATG4A-203ENST00000372232 LAMB4A4D0S4 1761 aa10.01□□□□□ -0.81
ATG4A-203ENST00000372232 COL16A1Q07092 1604 aaPredicted RBP10□□□□□ -0.81
ATG4A-203ENST00000372232 PHLPP1O60346 1717 aa10□□□□□ -0.81
ATG4A-203ENST00000372232 A0A0D9SFI3 127 aa10□□□□□ -0.81
ATG4A-203ENST00000372232 EBAG9O00559 213 aa10□□□□□ -0.81
ATG4A-203ENST00000372232 N4BP1O75113 896 aaKnown RBP10□□□□□ -0.81
ATG4A-203ENST00000372232 URI1O94763 535 aaPredicted RBP10□□□□□ -0.81
ATG4A-203ENST00000372232 CPA1P15085 419 aa10□□□□□ -0.81
ATG4A-203ENST00000372232 ZKSCAN1P17029 563 aaPredicted RBP10□□□□□ -0.81
ATG4A-203ENST00000372232 ATP5JP18859 108 aa10□□□□□ -0.81
ATG4A-203ENST00000372232 TXLNAP40222 546 aa10□□□□□ -0.81
ATG4A-203ENST00000372232 CD151P48509 253 aa10□□□□□ -0.81
ATG4A-203ENST00000372232 NT5DC4Q86YG4 428 aa10□□□□□ -0.81
ATG4A-203ENST00000372232 PLPP7Q8NBV4 271 aa10□□□□□ -0.81
ATG4A-203ENST00000372232 JAKMIP1Q96N16 626 aaKnown RBP10□□□□□ -0.81
ATG4A-203ENST00000372232 CWC25Q9NXE8 425 aaPredicted RBP10□□□□□ -0.81
ATG4A-203ENST00000372232 DNMT3AQ9Y6K1 912 aaPredicted RBP10□□□□□ -0.81
ATG4A-203ENST00000372232 ARFGEF2Q9Y6D5 1785 aa10□□□□□ -0.81
ATG4A-203ENST00000372232 TNS2Q63HR2 1409 aa10□□□□□ -0.81
ATG4A-203ENST00000372232 STX6O43752 255 aa10□□□□□ -0.81
ATG4A-203ENST00000372232 SHOX2O60902 331 aaPredicted RBP10□□□□□ -0.81
ATG4A-203ENST00000372232 P4HBP07237 508 aaKnown RBP10□□□□□ -0.81
ATG4A-203ENST00000372232 PDIA5Q14554 519 aa10□□□□□ -0.81
ATG4A-203ENST00000372232 DHX8Q14562 1220 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms