RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 FILIP1Q7Z7B0 1213 aa13.14□□□□□ -0.31
TSPAN1-201ENST00000372003 APOBEC3FQ8IUX4 373 aaKnown RBP13.14□□□□□ -0.31
TSPAN1-201ENST00000372003 FMR1NBQ8N0W7 255 aaPredicted RBP13.14□□□□□ -0.31
TSPAN1-201ENST00000372003 LCORLQ8N3X6 602 aa13.14□□□□□ -0.31
TSPAN1-201ENST00000372003 SMC1BQ8NDV3 1235 aa13.14□□□□□ -0.31
TSPAN1-201ENST00000372003 TGFBRAP1Q8WUH2 860 aa13.14□□□□□ -0.31
TSPAN1-201ENST00000372003 TCEANC2Q96MN5 208 aa13.14□□□□□ -0.31
TSPAN1-201ENST00000372003 RIOK1Q9BRS2 568 aaKnown RBP13.14□□□□□ -0.31
TSPAN1-201ENST00000372003 HELLSQ9NRZ9 838 aa13.14□□□□□ -0.31
TSPAN1-201ENST00000372003 M0R2C6 588 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 TRAF5O00463 557 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 YEATS4O95619 227 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 PLCG2P16885 1265 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 EVCP57679 992 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 EXOSC10Q01780 885 aaKnown RBP13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 FMR1Q06787 632 aaKnown RBP eCLIP13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 RASA3Q14644 834 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 NAA30Q147X3 362 aaPredicted RBP13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 ZMYM1Q5SVZ6 1142 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 NBPF11Q86T75 865 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 FCHSD1Q86WN1 690 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 FSIP1Q8NA03 581 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 DEFB129Q9H1M3 183 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 GOLPH3LQ9H4A5 285 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 ARGLU1Q9NWB6 273 aaPredicted RBP13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 PITPNM2Q9BZ72 1349 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 PTPDC1A2A3K4 754 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 IKBKBO14920 756 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 PRKAB2O43741 272 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 WDHD1O75717 1129 aaPredicted RBP13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 CYP21A2P08686 494 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 USP5P45974 858 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 TNNI2P48788 182 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 TNFAIP1Q13829 316 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 ELF2Q15723 593 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 E4F1Q66K89 784 aaPredicted RBP13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 CCDC129Q6ZRS4 1044 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 MAPKAPK5Q8IW41 473 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 ZFPM1Q8IX07 1006 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 RBM46Q8TBY0 533 aaKnown RBP13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 KCNG4Q8TDN1 519 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 USP28Q96RU2 1077 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 TMEM39BQ9GZU3 492 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 DDX4Q9NQI0 724 aaKnown RBP13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 FAM198AQ9UFP1 575 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 TAF6LQ9Y6J9 622 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 ADAMTSL1Q8N6G6 1762 aa13.13□□□□□ -0.31
TSPAN1-201ENST00000372003 GPAA1O43292 621 aa13.12□□□□□ -0.31
TSPAN1-201ENST00000372003 SFPQP23246 707 aaKnown RBP eCLIP13.12□□□□□ -0.31
TSPAN1-201ENST00000372003 COL9A3Q14050 684 aaPredicted RBP13.12□□□□□ -0.31
TSPAN1-201ENST00000372003 ZRSR1Q15695 479 aaKnown RBP13.12□□□□□ -0.31
TSPAN1-201ENST00000372003 AOPEPQ8N6M6 819 aa13.12□□□□□ -0.31
TSPAN1-201ENST00000372003 SDR42E1Q8WUS8 393 aa13.12□□□□□ -0.31
TSPAN1-201ENST00000372003 PPP1R13BQ96KQ4 1090 aa13.12□□□□□ -0.31
TSPAN1-201ENST00000372003 TIGD1Q96MW7 591 aa13.12□□□□□ -0.31
TSPAN1-201ENST00000372003 CRNKL1Q9BZJ0 848 aaKnown RBP13.12□□□□□ -0.31
TSPAN1-201ENST00000372003 ZNF408Q9H9D4 720 aa13.12□□□□□ -0.31
TSPAN1-201ENST00000372003 KIAA1468Q9P260 1216 aa13.12□□□□□ -0.31
TSPAN1-201ENST00000372003 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.12□□□□□ -0.31
TSPAN1-201ENST00000372003 CTDNEP1O95476 244 aa13.11□□□□□ -0.31
TSPAN1-201ENST00000372003 ITGBL1O95965 494 aaPredicted RBP13.11□□□□□ -0.31
TSPAN1-201ENST00000372003 NLRP12P59046 1061 aa13.11□□□□□ -0.31
TSPAN1-201ENST00000372003 FGD1P98174 961 aa13.11□□□□□ -0.31
TSPAN1-201ENST00000372003 SLC20A2Q08357 652 aa13.11□□□□□ -0.31
TSPAN1-201ENST00000372003 ARID5BQ14865 1188 aa13.11□□□□□ -0.31
TSPAN1-201ENST00000372003 SLC4A8Q2Y0W8 1093 aa13.11□□□□□ -0.31
TSPAN1-201ENST00000372003 CERS3Q8IU89 383 aa13.11□□□□□ -0.31
TSPAN1-201ENST00000372003 ZSCAN29Q8IWY8 852 aaPredicted RBP13.11□□□□□ -0.31
TSPAN1-201ENST00000372003 CDAN1Q8IWY9 1227 aa13.11□□□□□ -0.31
TSPAN1-201ENST00000372003 STRBPQ96SI9 672 aaKnown RBP13.11□□□□□ -0.31
TSPAN1-201ENST00000372003 IDI2Q9BXS1 227 aa13.11□□□□□ -0.31
TSPAN1-201ENST00000372003 TSPYL1Q9H0U9 437 aa13.11□□□□□ -0.31
TSPAN1-201ENST00000372003 POLR3EQ9NVU0 708 aa13.11□□□□□ -0.31
TSPAN1-201ENST00000372003 SLC4A4Q9Y6R1 1079 aa13.11□□□□□ -0.31
TSPAN1-201ENST00000372003 CNTNAP1P78357 1384 aa13.1□□□□□ -0.31
TSPAN1-201ENST00000372003 CBFA2T2O43439 604 aa13.1□□□□□ -0.31
TSPAN1-201ENST00000372003 APPP05067 770 aa13.1□□□□□ -0.31
TSPAN1-201ENST00000372003 ME1P48163 572 aa13.1□□□□□ -0.31
TSPAN1-201ENST00000372003 ETF1P62495 437 aaKnown RBP13.1□□□□□ -0.31
TSPAN1-201ENST00000372003 FKBP1CQ5VVH2 108 aa13.1□□□□□ -0.31
TSPAN1-201ENST00000372003 BRAPQ7Z569 592 aa13.1□□□□□ -0.31
TSPAN1-201ENST00000372003 FAM151AQ8WW52 585 aa13.1□□□□□ -0.31
TSPAN1-201ENST00000372003 DDX11Q96FC9 970 aa13.1□□□□□ -0.31
TSPAN1-201ENST00000372003 CDCA5Q96FF9 252 aa13.1□□□□□ -0.31
TSPAN1-201ENST00000372003 SDF4Q9BRK5 362 aa13.1□□□□□ -0.31
TSPAN1-201ENST00000372003 SAP30BPQ9UHR5 308 aaKnown RBP13.1□□□□□ -0.31
TSPAN1-201ENST00000372003 MYO5AQ9Y4I1 1855 aaKnown RBP13.1□□□□□ -0.31
TSPAN1-201ENST00000372003 DTNBO60941 627 aa13.1□□□□□ -0.31
TSPAN1-201ENST00000372003 ENTPD3O75355 529 aa13.1□□□□□ -0.31
TSPAN1-201ENST00000372003 CYP2C19P33261 490 aa13.1□□□□□ -0.31
TSPAN1-201ENST00000372003 FSTL1Q12841 308 aa13.1□□□□□ -0.31
TSPAN1-201ENST00000372003 PRKG1Q13976 671 aa13.1□□□□□ -0.31
TSPAN1-201ENST00000372003 TEX35Q5T0J7 233 aa13.1□□□□□ -0.31
TSPAN1-201ENST00000372003 NBPF12Q5TAG4 269 aaPredicted RBP13.1□□□□□ -0.31
TSPAN1-201ENST00000372003 FAM83AQ86UY5 434 aa13.1□□□□□ -0.31
TSPAN1-201ENST00000372003 TRMT1Q9NXH9 659 aaKnown RBP13.1□□□□□ -0.31
TSPAN1-201ENST00000372003 PCDHA7Q9UN72 937 aa13.1□□□□□ -0.31
TSPAN1-201ENST00000372003 FLT1P17948 1338 aa13.09□□□□□ -0.31
TSPAN1-201ENST00000372003 GOLGA6L9A6NEM1 432 aa13.09□□□□□ -0.31
TSPAN1-201ENST00000372003 DDTLA6NHG4 134 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms