RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 CATIPQ7Z7H3 387 aa20.62■□□□□ 0.89
VPS37B-202ENST00000371248 ZNF654Q8IZM8 581 aa20.62■□□□□ 0.89
VPS37B-202ENST00000371248 CHMP4CQ96CF2 233 aa20.62■□□□□ 0.89
VPS37B-202ENST00000371248 TMX2Q9Y320 296 aa20.62■□□□□ 0.89
VPS37B-202ENST00000371248 AFG3L2Q9Y4W6 797 aa20.62■□□□□ 0.89
VPS37B-202ENST00000371248 TRIM75PA6NK02 468 aa20.62■□□□□ 0.89
VPS37B-202ENST00000371248 USP17L10C9JJH3 530 aa20.62■□□□□ 0.89
VPS37B-202ENST00000371248 EVCP57679 992 aa20.62■□□□□ 0.89
VPS37B-202ENST00000371248 ZYXQ15942 572 aaKnown RBP20.62■□□□□ 0.89
VPS37B-202ENST00000371248 SYNE3Q6ZMZ3 975 aa20.62■□□□□ 0.89
VPS37B-202ENST00000371248 RAB11FIP4Q86YS3 637 aa20.62■□□□□ 0.89
VPS37B-202ENST00000371248 OPTNQ96CV9 577 aa20.62■□□□□ 0.89
VPS37B-202ENST00000371248 FEZ1Q99689 392 aa20.62■□□□□ 0.89
VPS37B-202ENST00000371248 MYL10Q9BUA6 226 aa20.62■□□□□ 0.89
VPS37B-202ENST00000371248 TBC1D2Q9BYX2 928 aa20.62■□□□□ 0.89
VPS37B-202ENST00000371248 SH2D4AQ9H788 454 aa20.62■□□□□ 0.89
VPS37B-202ENST00000371248 APOA5Q6Q788 366 aa20.61■□□□□ 0.89
VPS37B-202ENST00000371248 ABT1Q9ULW3 272 aaKnown RBP20.61■□□□□ 0.89
VPS37B-202ENST00000371248 LIMCH1Q9UPQ0 1083 aa20.61■□□□□ 0.89
VPS37B-202ENST00000371248 TLL2Q9Y6L7 1015 aa20.61■□□□□ 0.89
VPS37B-202ENST00000371248 MCM2P49736 904 aa20.6■□□□□ 0.89
VPS37B-202ENST00000371248 NUP133Q8WUM0 1156 aa20.6■□□□□ 0.89
VPS37B-202ENST00000371248 PTPRFP10586 1907 aa20.6■□□□□ 0.89
VPS37B-202ENST00000371248 F5H6K3 240 aa20.6■□□□□ 0.89
VPS37B-202ENST00000371248 IRF6O14896 467 aa20.6■□□□□ 0.89
VPS37B-202ENST00000371248 RXRAP19793 462 aa20.6■□□□□ 0.89
VPS37B-202ENST00000371248 KLRC3Q07444 240 aa20.6■□□□□ 0.89
VPS37B-202ENST00000371248 STK3Q13188 491 aa20.6■□□□□ 0.89
VPS37B-202ENST00000371248 MTMR2Q13614 643 aa20.6■□□□□ 0.89
VPS37B-202ENST00000371248 MICU3Q86XE3 530 aa20.6■□□□□ 0.89
VPS37B-202ENST00000371248 ZNF274Q96GC6 653 aaPredicted RBP20.6■□□□□ 0.89
VPS37B-202ENST00000371248 ZBTB43O43298 467 aa20.59■□□□□ 0.89
VPS37B-202ENST00000371248 PDIA3P30101 505 aaKnown RBP20.59■□□□□ 0.89
VPS37B-202ENST00000371248 BACE1P56817 501 aa20.59■□□□□ 0.89
VPS37B-202ENST00000371248 TROAPQ12815 778 aa20.59■□□□□ 0.89
VPS37B-202ENST00000371248 PPIL2Q13356 520 aa20.59■□□□□ 0.89
VPS37B-202ENST00000371248 CCDC144CPQ8IYA2 1237 aa20.59■□□□□ 0.89
VPS37B-202ENST00000371248 SNX21Q969T3 373 aa20.59■□□□□ 0.89
VPS37B-202ENST00000371248 KIAA1683Q9H0B3 1180 aa20.59■□□□□ 0.89
VPS37B-202ENST00000371248 GOPCQ9HD26 462 aa20.59■□□□□ 0.89
VPS37B-202ENST00000371248 SYNPO2Q9UMS6 1093 aa20.59■□□□□ 0.89
VPS37B-202ENST00000371248 GOLGA8BA8MQT2 603 aa20.58■□□□□ 0.89
VPS37B-202ENST00000371248 LARGE1O95461 756 aa20.58■□□□□ 0.89
VPS37B-202ENST00000371248 ME3Q16798 604 aa20.58■□□□□ 0.89
VPS37B-202ENST00000371248 RASGRP2Q7LDG7 609 aa20.58■□□□□ 0.89
VPS37B-202ENST00000371248 VCPKMTQ9H867 229 aa20.58■□□□□ 0.89
VPS37B-202ENST00000371248 DDAH1O94760 285 aa20.58■□□□□ 0.88
VPS37B-202ENST00000371248 GJA5P36382 358 aa20.58■□□□□ 0.88
VPS37B-202ENST00000371248 APLP1P51693 650 aa20.58■□□□□ 0.88
VPS37B-202ENST00000371248 ZNF157P51786 506 aaPredicted RBP20.58■□□□□ 0.88
VPS37B-202ENST00000371248 DGKZQ13574 1117 aa20.58■□□□□ 0.88
VPS37B-202ENST00000371248 SLFN13Q68D06 897 aa20.58■□□□□ 0.88
VPS37B-202ENST00000371248 SPICE1Q8N0Z3 855 aa20.58■□□□□ 0.88
VPS37B-202ENST00000371248 GMCL1P1Q8NEA9 526 aa20.58■□□□□ 0.88
VPS37B-202ENST00000371248 WNK4Q96J92 1243 aa20.58■□□□□ 0.88
VPS37B-202ENST00000371248 C19orf81C9J6K1 198 aa20.57■□□□□ 0.88
VPS37B-202ENST00000371248 CALM1P0DP23 149 aa20.57■□□□□ 0.88
VPS37B-202ENST00000371248 CALM2P0DP24 149 aa20.57■□□□□ 0.88
VPS37B-202ENST00000371248 CALM3P0DP25 149 aa20.57■□□□□ 0.88
VPS37B-202ENST00000371248 USP14P54578 494 aa20.57■□□□□ 0.88
VPS37B-202ENST00000371248 CCT2P78371 535 aaKnown RBP20.57■□□□□ 0.88
VPS37B-202ENST00000371248 KIAA1755Q5JYT7 1200 aa20.57■□□□□ 0.88
VPS37B-202ENST00000371248 RGMBQ6NW40 437 aa20.57■□□□□ 0.88
VPS37B-202ENST00000371248 ZSCAN31Q96LW9 406 aaPredicted RBP20.57■□□□□ 0.88
VPS37B-202ENST00000371248 HPS5Q9UPZ3 1129 aa20.57■□□□□ 0.88
VPS37B-202ENST00000371248 NDUFB10O96000 172 aa20.57■□□□□ 0.88
VPS37B-202ENST00000371248 PDHBP11177 359 aa20.57■□□□□ 0.88
VPS37B-202ENST00000371248 METAP2P50579 478 aaKnown RBP eCLIP20.57■□□□□ 0.88
VPS37B-202ENST00000371248 HMGCS2P54868 508 aa20.57■□□□□ 0.88
VPS37B-202ENST00000371248 MKRN3Q13064 507 aaKnown RBP20.57■□□□□ 0.88
VPS37B-202ENST00000371248 HSCBQ8IWL3 235 aa20.57■□□□□ 0.88
VPS37B-202ENST00000371248 FANCBQ8NB91 859 aa20.57■□□□□ 0.88
VPS37B-202ENST00000371248 SLKQ9H2G2 1235 aaPredicted RBP20.57■□□□□ 0.88
VPS37B-202ENST00000371248 GOLGA8AA7E2F4 631 aa20.56■□□□□ 0.88
VPS37B-202ENST00000371248 CXCL11O14625 94 aa20.56■□□□□ 0.88
VPS37B-202ENST00000371248 USP17L2Q6R6M4 530 aa20.56■□□□□ 0.88
VPS37B-202ENST00000371248 TMX3Q96JJ7 454 aa20.56■□□□□ 0.88
VPS37B-202ENST00000371248 EMILIN3Q9NT22 766 aa20.56■□□□□ 0.88
VPS37B-202ENST00000371248 KCNH4Q9UQ05 1017 aa20.56■□□□□ 0.88
VPS37B-202ENST00000371248 ANP32AP39687 249 aaKnown RBP20.55■□□□□ 0.88
VPS37B-202ENST00000371248 NECAB1Q8N987 351 aa20.55■□□□□ 0.88
VPS37B-202ENST00000371248 PFKFB2O60825 505 aa20.55■□□□□ 0.88
VPS37B-202ENST00000371248 GOLGA8HP0CJ92 632 aa20.55■□□□□ 0.88
VPS37B-202ENST00000371248 SNHG28P0DPA3 235 aa20.55■□□□□ 0.88
VPS37B-202ENST00000371248 SLC1A4P43007 532 aa20.55■□□□□ 0.88
VPS37B-202ENST00000371248 RCAN1P53805 252 aa20.55■□□□□ 0.88
VPS37B-202ENST00000371248 SPRYD7Q5W111 196 aa20.55■□□□□ 0.88
VPS37B-202ENST00000371248 CTCFLQ8NI51 663 aaPredicted RBP20.55■□□□□ 0.88
VPS37B-202ENST00000371248 NUP88Q99567 741 aaPredicted RBP20.55■□□□□ 0.88
VPS37B-202ENST00000371248 NCOA5Q9HCD5 579 aaKnown RBP20.55■□□□□ 0.88
VPS37B-202ENST00000371248 CREBZFQ9NS37 354 aa20.55■□□□□ 0.88
VPS37B-202ENST00000371248 K7ELQ4 463 aaPredicted RBP20.54■□□□□ 0.88
VPS37B-202ENST00000371248 PARP1P09874 1014 aaKnown RBP20.54■□□□□ 0.88
VPS37B-202ENST00000371248 GRM4Q14833 912 aa20.54■□□□□ 0.88
VPS37B-202ENST00000371248 RTN1Q16799 776 aa20.54■□□□□ 0.88
VPS37B-202ENST00000371248 SH3D19Q5HYK7 790 aa20.54■□□□□ 0.88
VPS37B-202ENST00000371248 RASAL3Q86YV0 1011 aa20.54■□□□□ 0.88
VPS37B-202ENST00000371248 DCAF4Q8WV16 495 aa20.54■□□□□ 0.88
VPS37B-202ENST00000371248 GMCL1Q96IK5 515 aa20.54■□□□□ 0.88
VPS37B-202ENST00000371248 MAP3K14Q99558 947 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms