RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 JDP2Q8WYK2 163 aa13.72□□□□□ -0.21
HCFC1-202ENST00000369984 FAM207AQ9NSI2 230 aaPredicted RBP13.72□□□□□ -0.21
HCFC1-202ENST00000369984 NOD1Q9Y239 953 aa13.72□□□□□ -0.21
HCFC1-202ENST00000369984 EXOC3O60645 756 aa13.71□□□□□ -0.21
HCFC1-202ENST00000369984 ARHGAP4P98171 946 aa13.71□□□□□ -0.21
HCFC1-202ENST00000369984 PNOCQ13519 176 aa13.71□□□□□ -0.21
HCFC1-202ENST00000369984 UIMC1Q96RL1 719 aa13.71□□□□□ -0.21
HCFC1-202ENST00000369984 ANLNQ9NQW6 1124 aa13.71□□□□□ -0.21
HCFC1-202ENST00000369984 PPFIA4O75335 1185 aa13.71□□□□□ -0.21
HCFC1-202ENST00000369984 TMED1Q13445 227 aa13.71□□□□□ -0.21
HCFC1-202ENST00000369984 SDCCAG3Q96C92 435 aa13.71□□□□□ -0.21
HCFC1-202ENST00000369984 SPDL1Q96EA4 605 aa13.71□□□□□ -0.21
HCFC1-202ENST00000369984 ARMT1Q9H993 441 aa13.71□□□□□ -0.21
HCFC1-202ENST00000369984 GSTA1P08263 222 aa13.71□□□□□ -0.21
HCFC1-202ENST00000369984 GSTA2P09210 222 aa13.71□□□□□ -0.21
HCFC1-202ENST00000369984 CLTAP09496 248 aa13.71□□□□□ -0.21
HCFC1-202ENST00000369984 SLC8A1P32418 973 aa13.71□□□□□ -0.21
HCFC1-202ENST00000369984 THAP12O43422 761 aa13.71□□□□□ -0.21
HCFC1-202ENST00000369984 P4HA1P13674 534 aa13.71□□□□□ -0.21
HCFC1-202ENST00000369984 PUM3Q15397 648 aaKnown RBP13.71□□□□□ -0.21
HCFC1-202ENST00000369984 ARHGAP44Q17R89 818 aa13.71□□□□□ -0.21
HCFC1-202ENST00000369984 GRK7Q8WTQ7 553 aa13.71□□□□□ -0.21
HCFC1-202ENST00000369984 STAG1Q8WVM7 1258 aa13.71□□□□□ -0.21
HCFC1-202ENST00000369984 KCNK3O14649 394 aa13.71□□□□□ -0.22
HCFC1-202ENST00000369984 BRD3Q15059 726 aa13.71□□□□□ -0.22
HCFC1-202ENST00000369984 LSM14BQ9BX40 385 aaKnown RBP13.71□□□□□ -0.22
HCFC1-202ENST00000369984 CAPS2Q9BXY5 557 aa13.71□□□□□ -0.22
HCFC1-202ENST00000369984 GPHNQ9NQX3 736 aaPredicted RBP13.71□□□□□ -0.22
HCFC1-202ENST00000369984 IDI1Q13907 227 aa13.71□□□□□ -0.22
HCFC1-202ENST00000369984 FBXO31Q5XUX0 539 aaPredicted RBP13.71□□□□□ -0.22
HCFC1-202ENST00000369984 SPATS2Q86XZ4 545 aaKnown RBP13.71□□□□□ -0.22
HCFC1-202ENST00000369984 SCYL1Q96KG9 808 aa13.71□□□□□ -0.22
HCFC1-202ENST00000369984 SPC25Q9HBM1 224 aa13.71□□□□□ -0.22
HCFC1-202ENST00000369984 RRAGDQ9NQL2 400 aaPredicted RBP13.71□□□□□ -0.22
HCFC1-202ENST00000369984 ZBTB40Q9NUA8 1239 aa13.71□□□□□ -0.22
HCFC1-202ENST00000369984 MRFAP1Q9Y605 127 aa13.71□□□□□ -0.22
HCFC1-202ENST00000369984 THOC2Q8NI27 1593 aaKnown RBP13.71□□□□□ -0.22
HCFC1-202ENST00000369984 GNGT1P63211 74 aa13.7□□□□□ -0.22
HCFC1-202ENST00000369984 PARP3Q9Y6F1 533 aa13.7□□□□□ -0.22
HCFC1-202ENST00000369984 KDM5BQ9UGL1 1544 aa13.7□□□□□ -0.22
HCFC1-202ENST00000369984 TNNI1P19237 187 aa13.7□□□□□ -0.22
HCFC1-202ENST00000369984 ZNF445P59923 1031 aa13.7□□□□□ -0.22
HCFC1-202ENST00000369984 CDC37L1Q7L3B6 337 aa13.7□□□□□ -0.22
HCFC1-202ENST00000369984 MMEL1Q495T6 779 aa13.7□□□□□ -0.22
HCFC1-202ENST00000369984 NBPF14Q5TI25 921 aa13.7□□□□□ -0.22
HCFC1-202ENST00000369984 BLZF1Q9H2G9 400 aa13.7□□□□□ -0.22
HCFC1-202ENST00000369984 HOMER3Q9NSC5 361 aa13.7□□□□□ -0.22
HCFC1-202ENST00000369984 AATFQ9NY61 560 aaKnown RBP eCLIP13.7□□□□□ -0.22
HCFC1-202ENST00000369984 GADD45BO75293 160 aaPredicted RBP13.7□□□□□ -0.22
HCFC1-202ENST00000369984 ADCY8P40145 1251 aa13.7□□□□□ -0.22
HCFC1-202ENST00000369984 ZMYM4Q5VZL5 1548 aa13.7□□□□□ -0.22
HCFC1-202ENST00000369984 RBM17Q96I25 401 aaKnown RBP13.7□□□□□ -0.22
HCFC1-202ENST00000369984 FAM71BQ8TC56 605 aa13.7□□□□□ -0.22
HCFC1-202ENST00000369984 EYA3Q99504 573 aa13.7□□□□□ -0.22
HCFC1-202ENST00000369984 TYW1Q9NV66 732 aaKnown RBP13.7□□□□□ -0.22
HCFC1-202ENST00000369984 BIN2Q9UBW5 565 aaPredicted RBP13.7□□□□□ -0.22
HCFC1-202ENST00000369984 RLBP1P12271 317 aa13.69□□□□□ -0.22
HCFC1-202ENST00000369984 ADCY7P51828 1080 aa13.69□□□□□ -0.22
HCFC1-202ENST00000369984 SNCBQ16143 134 aa13.69□□□□□ -0.22
HCFC1-202ENST00000369984 IQCDQ96DY2 449 aa13.69□□□□□ -0.22
HCFC1-202ENST00000369984 RIC8AQ9NPQ8 531 aa13.69□□□□□ -0.22
HCFC1-202ENST00000369984 XRCC5P13010 732 aaKnown RBP13.69□□□□□ -0.22
HCFC1-202ENST00000369984 ABCB4P21439 1286 aa13.69□□□□□ -0.22
HCFC1-202ENST00000369984 CCDC93Q567U6 631 aa13.69□□□□□ -0.22
HCFC1-202ENST00000369984 RASEFQ8IZ41 740 aa13.69□□□□□ -0.22
HCFC1-202ENST00000369984 HAUS1Q96CS2 278 aa13.69□□□□□ -0.22
HCFC1-202ENST00000369984 EIF4G3O43432 1585 aaKnown RBP13.69□□□□□ -0.22
HCFC1-202ENST00000369984 GPAA1O43292 621 aa13.69□□□□□ -0.22
HCFC1-202ENST00000369984 APOEP02649 317 aa13.69□□□□□ -0.22
HCFC1-202ENST00000369984 TRIM56Q9BRZ2 755 aaKnown RBP13.69□□□□□ -0.22
HCFC1-202ENST00000369984 C14orf93Q9H972 538 aaKnown RBP13.69□□□□□ -0.22
HCFC1-202ENST00000369984 RNF8O76064 485 aa13.69□□□□□ -0.22
HCFC1-202ENST00000369984 EIF4A2Q14240 407 aaKnown RBP13.69□□□□□ -0.22
HCFC1-202ENST00000369984 DUOX2Q9NRD8 1548 aa13.69□□□□□ -0.22
HCFC1-202ENST00000369984 BRDTQ58F21 947 aaPredicted RBP13.69□□□□□ -0.22
HCFC1-202ENST00000369984 SPATS2LQ9NUQ6 558 aaKnown RBP13.69□□□□□ -0.22
HCFC1-202ENST00000369984 CD19P15391 556 aa13.69□□□□□ -0.22
HCFC1-202ENST00000369984 PHEXP78562 749 aa13.69□□□□□ -0.22
HCFC1-202ENST00000369984 KLHDC4Q8TBB5 520 aa13.69□□□□□ -0.22
HCFC1-202ENST00000369984 IBTKQ9P2D0 1353 aaPredicted RBP13.69□□□□□ -0.22
HCFC1-202ENST00000369984 STAM2O75886 525 aa13.68□□□□□ -0.22
HCFC1-202ENST00000369984 BAG5Q9UL15 447 aa13.68□□□□□ -0.22
HCFC1-202ENST00000369984 FANCAO15360 1455 aa13.68□□□□□ -0.22
HCFC1-202ENST00000369984 IFNB1P01574 187 aa13.68□□□□□ -0.22
HCFC1-202ENST00000369984 KIF11P52732 1056 aa13.68□□□□□ -0.22
HCFC1-202ENST00000369984 LRMPQ12912 555 aa13.68□□□□□ -0.22
HCFC1-202ENST00000369984 KSR1Q8IVT5 923 aa13.68□□□□□ -0.22
HCFC1-202ENST00000369984 TRMT44Q8IYL2 757 aaKnown RBP13.68□□□□□ -0.22
HCFC1-202ENST00000369984 LZTS2Q9BRK4 669 aa13.68□□□□□ -0.22
HCFC1-202ENST00000369984 SNX14Q9Y5W7 946 aa13.68□□□□□ -0.22
HCFC1-202ENST00000369984 PLCH2O75038 1416 aa13.68□□□□□ -0.22
HCFC1-202ENST00000369984 PDCD2Q16342 344 aaPredicted RBP13.68□□□□□ -0.22
HCFC1-202ENST00000369984 NELFCDQ8IXH7 590 aa13.68□□□□□ -0.22
HCFC1-202ENST00000369984 KCNJ18B7U540 433 aa13.68□□□□□ -0.22
HCFC1-202ENST00000369984 ATF7P17544 494 aaPredicted RBP13.68□□□□□ -0.22
HCFC1-202ENST00000369984 KCNJ12Q14500 433 aa13.68□□□□□ -0.22
HCFC1-202ENST00000369984 PPP2R5EQ16537 467 aa13.68□□□□□ -0.22
HCFC1-202ENST00000369984 RASIP1Q5U651 963 aa13.68□□□□□ -0.22
HCFC1-202ENST00000369984 CADPS2Q86UW7 1296 aa13.68□□□□□ -0.22
HCFC1-202ENST00000369984 PPP1R9AQ9ULJ8 1098 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms