RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 CACNA1SQ13698 1873 aa5.84□□□□□ -1.47
UBE3D-202ENST00000369746 TMEM238LA0A1B0GVL6 79 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 A6NCN8 305 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 BBOX1O75936 387 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 POTEIP0CG38 1075 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 POTEJP0CG39 1038 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 SETSIPP0DME0 302 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 OAS2P29728 719 aaKnown RBP5.83□□□□□ -1.48
UBE3D-202ENST00000369746 CDC27P30260 824 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 GEMIN4P57678 1058 aaKnown RBP5.83□□□□□ -1.48
UBE3D-202ENST00000369746 EAPPQ56P03 285 aaPredicted RBP5.83□□□□□ -1.48
UBE3D-202ENST00000369746 AGAP9Q5VTM2 703 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 MAP1SQ66K74 1059 aaPredicted RBP5.83□□□□□ -1.48
UBE3D-202ENST00000369746 METTL16Q86W50 562 aaKnown RBP5.83□□□□□ -1.48
UBE3D-202ENST00000369746 SAMD14Q8IZD0 417 aaPredicted RBP5.83□□□□□ -1.48
UBE3D-202ENST00000369746 IQUBQ8NA54 791 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 PRPF38AQ8NAV1 312 aaKnown RBP5.83□□□□□ -1.48
UBE3D-202ENST00000369746 AGBL3Q8NEM8 1001 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 SMCR8Q8TEV9 937 aaPredicted RBP5.83□□□□□ -1.48
UBE3D-202ENST00000369746 STK32AQ8WU08 396 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 IPCEF1Q8WWN9 437 aaPredicted RBP5.83□□□□□ -1.48
UBE3D-202ENST00000369746 PIBF1Q8WXW3 757 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 RBM17Q96I25 401 aaKnown RBP5.83□□□□□ -1.48
UBE3D-202ENST00000369746 SETDB2Q96T68 719 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 OSBPL2Q9H1P3 480 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 TSPYL2Q9H2G4 693 aaPredicted RBP5.83□□□□□ -1.48
UBE3D-202ENST00000369746 DHX36Q9H2U1 1008 aaKnown RBP5.83□□□□□ -1.48
UBE3D-202ENST00000369746 CASP8AP2Q9UKL3 1982 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 RPTORQ8N122 1335 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 MYO3BQ8WXR4 1341 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 LILRB3O75022 631 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 CAND2O75155 1236 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 HUNKP57058 714 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 FKBP5Q13451 457 aaPredicted RBP5.83□□□□□ -1.48
UBE3D-202ENST00000369746 RAPGEF1Q13905 1077 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 TAF11Q15544 211 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 INF2Q27J81 1249 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 HSP90B2PQ58FF3 399 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 ANKRD45Q5TZF3 282 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 LLGL2Q6P1M3 1020 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 ZNF449Q6P9G9 518 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 STK11IPQ8N1F8 1099 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 ZFPM2Q8WW38 1151 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 SH3KBP1Q96B97 665 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 C1QTNF1Q9BXJ1 281 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 PPP1R12CQ9BZL4 782 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 H0YHG0 523 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 FYB1O15117 783 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 CAMTA2O94983 1202 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 CPP00450 1065 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 COL6A1P12109 1028 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 MAGEA8P43361 318 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 RASA3Q14644 834 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 MCTP2Q6DN12 878 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 C16orf54Q6UWD8 224 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 CCDC73Q6ZRK6 1079 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 C14orf80Q86SX3 495 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 SP8Q8IXZ3 490 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 PGBD3Q8N328 593 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 ZNF713Q8N859 430 aaPredicted RBP5.83□□□□□ -1.48
UBE3D-202ENST00000369746 KLHL23Q8NBE8 558 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 LZTS2Q9BRK4 669 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 TRIM6Q9C030 488 aaPredicted RBP5.83□□□□□ -1.48
UBE3D-202ENST00000369746 BRINP2Q9C0B6 783 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 PANK3Q9H999 370 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 COMMD8Q9NX08 183 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 ACAD8Q9UKU7 415 aa5.83□□□□□ -1.48
UBE3D-202ENST00000369746 FARP1Q9Y4F1 1045 aaPredicted RBP5.83□□□□□ -1.48
UBE3D-202ENST00000369746 RPAP1Q9BWH6 1393 aaPredicted RBP5.82□□□□□ -1.48
UBE3D-202ENST00000369746 A0A1W2PRQ8 180 aa5.82□□□□□ -1.48
UBE3D-202ENST00000369746 SHTN1A0MZ66 631 aa5.82□□□□□ -1.48
UBE3D-202ENST00000369746 PALM3A6NDB9 673 aaPredicted RBP5.82□□□□□ -1.48
UBE3D-202ENST00000369746 SOWAHDA6NJG2 315 aa5.82□□□□□ -1.48
UBE3D-202ENST00000369746 C19orf81C9J6K1 198 aa5.82□□□□□ -1.48
UBE3D-202ENST00000369746 GLULP15104 373 aa5.82□□□□□ -1.48
UBE3D-202ENST00000369746 DDIT3P35638 169 aa5.82□□□□□ -1.48
UBE3D-202ENST00000369746 C1QBPQ07021 282 aaKnown RBP5.82□□□□□ -1.48
UBE3D-202ENST00000369746 TRIM29Q14134 588 aa5.82□□□□□ -1.48
UBE3D-202ENST00000369746 C1orf141Q5JVX7 400 aa5.82□□□□□ -1.48
UBE3D-202ENST00000369746 UNC5DQ6UXZ4 953 aa5.82□□□□□ -1.48
UBE3D-202ENST00000369746 RASGRP2Q7LDG7 609 aa5.82□□□□□ -1.48
UBE3D-202ENST00000369746 ZNF296Q8WUU4 475 aaPredicted RBP5.82□□□□□ -1.48
UBE3D-202ENST00000369746 NLRP7Q8WX94 980 aa5.82□□□□□ -1.48
UBE3D-202ENST00000369746 PPM1EQ8WY54 764 aa5.82□□□□□ -1.48
UBE3D-202ENST00000369746 ARNT2Q9HBZ2 717 aa5.82□□□□□ -1.48
UBE3D-202ENST00000369746 RNF19AQ9NV58 838 aa5.82□□□□□ -1.48
UBE3D-202ENST00000369746 UTP6Q9NYH9 597 aaKnown RBP5.82□□□□□ -1.48
UBE3D-202ENST00000369746 DDX49Q9Y6V7 483 aaKnown RBP5.82□□□□□ -1.48
UBE3D-202ENST00000369746 V9GYY5 206 aaPredicted RBP5.82□□□□□ -1.48
UBE3D-202ENST00000369746 MAPK8IP3Q9UPT6 1336 aa5.82□□□□□ -1.48
UBE3D-202ENST00000369746 KCNQ4P56696 695 aa5.82□□□□□ -1.48
UBE3D-202ENST00000369746 ZSCAN26Q16670 478 aa5.82□□□□□ -1.48
UBE3D-202ENST00000369746 KLHL40Q2TBA0 621 aa5.82□□□□□ -1.48
UBE3D-202ENST00000369746 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.82□□□□□ -1.48
UBE3D-202ENST00000369746 FAM184AQ8NB25 1140 aa5.82□□□□□ -1.48
UBE3D-202ENST00000369746 APPL2Q8NEU8 664 aa5.82□□□□□ -1.48
UBE3D-202ENST00000369746 APBA2Q99767 749 aa5.82□□□□□ -1.48
UBE3D-202ENST00000369746 POLR3CQ9BUI4 534 aaPredicted RBP5.82□□□□□ -1.48
UBE3D-202ENST00000369746 A1CFQ9NQ94 594 aaKnown RBP5.82□□□□□ -1.48
UBE3D-202ENST00000369746 TAGLN3Q9UI15 199 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms