RNA–Protein interactions for RNA: ENST00000369220.8

CCNC-203, Transcript of cyclin C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCNC, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-203ENST00000369220 KRT23Q9C075 422 aa12.17□□□□□ -0.46
CCNC-203ENST00000369220 CNNM2Q9H8M5 875 aa12.17□□□□□ -0.46
CCNC-203ENST00000369220 AGTPBP1Q9UPW5 1226 aa12.17□□□□□ -0.46
CCNC-203ENST00000369220 SNX14Q9Y5W7 946 aa12.17□□□□□ -0.46
CCNC-203ENST00000369220 LOC285556D6RIA3 1793 aa12.17□□□□□ -0.46
CCNC-203ENST00000369220 TNKSO95271 1327 aa12.16□□□□□ -0.46
CCNC-203ENST00000369220 MYH4Q9Y623 1939 aa12.16□□□□□ -0.46
CCNC-203ENST00000369220 C19orf81C9J6K1 198 aa12.16□□□□□ -0.46
CCNC-203ENST00000369220 NOVP48745 357 aa12.16□□□□□ -0.46
CCNC-203ENST00000369220 RNF20Q5VTR2 975 aa12.16□□□□□ -0.46
CCNC-203ENST00000369220 FASTKD5Q7L8L6 764 aaKnown RBP12.16□□□□□ -0.46
CCNC-203ENST00000369220 PROCA1Q8NCQ7 364 aaPredicted RBP12.16□□□□□ -0.46
CCNC-203ENST00000369220 NCOA7Q8NI08 942 aa12.16□□□□□ -0.46
CCNC-203ENST00000369220 LRRC2Q9BYS8 371 aa12.16□□□□□ -0.46
CCNC-203ENST00000369220 VCPKMTQ9H867 229 aa12.16□□□□□ -0.46
CCNC-203ENST00000369220 NYAP2Q9P242 653 aa12.16□□□□□ -0.46
CCNC-203ENST00000369220 F5H6K3 240 aa12.16□□□□□ -0.46
CCNC-203ENST00000369220 FOXN1O15353 648 aa12.16□□□□□ -0.46
CCNC-203ENST00000369220 NDUFB10O96000 172 aa12.16□□□□□ -0.46
CCNC-203ENST00000369220 KLRC3Q07444 240 aa12.16□□□□□ -0.46
CCNC-203ENST00000369220 IQCA1Q86XH1 822 aa12.16□□□□□ -0.46
CCNC-203ENST00000369220 C12orf42Q96LP6 360 aa12.16□□□□□ -0.46
CCNC-203ENST00000369220 ZSCAN10Q96SZ4 725 aaPredicted RBP12.16□□□□□ -0.46
CCNC-203ENST00000369220 TMEM47Q9BQJ4 181 aa12.16□□□□□ -0.46
CCNC-203ENST00000369220 TMOD4Q9NZQ9 345 aa12.16□□□□□ -0.46
CCNC-203ENST00000369220 ZKSCAN1P17029 563 aaPredicted RBP12.15□□□□□ -0.46
CCNC-203ENST00000369220 TAF1CQ15572 869 aaPredicted RBP12.15□□□□□ -0.46
CCNC-203ENST00000369220 USP17L2Q6R6M4 530 aa12.15□□□□□ -0.46
CCNC-203ENST00000369220 POTEEQ6S8J3 1075 aa12.15□□□□□ -0.46
CCNC-203ENST00000369220 ANKRD23Q86SG2 305 aa12.15□□□□□ -0.46
CCNC-203ENST00000369220 UBAC1Q9BSL1 405 aa12.15□□□□□ -0.46
CCNC-203ENST00000369220 ASCC2Q9H1I8 757 aaPredicted RBP12.15□□□□□ -0.46
CCNC-203ENST00000369220 RPAP3Q9H6T3 665 aaPredicted RBP12.15□□□□□ -0.46
CCNC-203ENST00000369220 TCP11L1Q9NUJ3 509 aa12.15□□□□□ -0.46
CCNC-203ENST00000369220 FBXO28Q9NVF7 368 aa12.15□□□□□ -0.46
CCNC-203ENST00000369220 ECM2O94769 699 aaPredicted RBP12.14□□□□□ -0.47
CCNC-203ENST00000369220 USP14P54578 494 aa12.14□□□□□ -0.47
CCNC-203ENST00000369220 SEC23AQ15436 765 aa12.14□□□□□ -0.47
CCNC-203ENST00000369220 FAM83BQ5T0W9 1011 aa12.14□□□□□ -0.47
CCNC-203ENST00000369220 KCNB2Q92953 911 aa12.14□□□□□ -0.47
CCNC-203ENST00000369220 MKL1Q969V6 931 aa12.14□□□□□ -0.47
CCNC-203ENST00000369220 BEGAINQ9BUH8 593 aa12.14□□□□□ -0.47
CCNC-203ENST00000369220 PRC1O43663 620 aa12.14□□□□□ -0.47
CCNC-203ENST00000369220 MCCP23508 829 aa12.14□□□□□ -0.47
CCNC-203ENST00000369220 TSGA10IPQ3SY00 556 aa12.14□□□□□ -0.47
CCNC-203ENST00000369220 SAMD1Q6SPF0 538 aaPredicted RBP12.14□□□□□ -0.47
CCNC-203ENST00000369220 JAKMIP1Q96N16 626 aaKnown RBP12.14□□□□□ -0.47
CCNC-203ENST00000369220 NEK1Q96PY6 1258 aa12.14□□□□□ -0.47
CCNC-203ENST00000369220 TANGO6Q9C0B7 1094 aa12.14□□□□□ -0.47
CCNC-203ENST00000369220 SH2D4AQ9H788 454 aa12.14□□□□□ -0.47
CCNC-203ENST00000369220 CA12O43570 354 aa12.13□□□□□ -0.47
CCNC-203ENST00000369220 REM2Q8IYK8 340 aaPredicted RBP12.13□□□□□ -0.47
CCNC-203ENST00000369220 IGDCC4Q8TDY8 1250 aa12.13□□□□□ -0.47
CCNC-203ENST00000369220 SMCR8Q8TEV9 937 aaPredicted RBP12.13□□□□□ -0.47
CCNC-203ENST00000369220 LPAR1Q92633 364 aa12.13□□□□□ -0.47
CCNC-203ENST00000369220 UPF3BQ9BZI7 483 aaKnown RBP12.13□□□□□ -0.47
CCNC-203ENST00000369220 GOPCQ9HD26 462 aa12.13□□□□□ -0.47
CCNC-203ENST00000369220 DNAH12Q6ZR08 3092 aa12.13□□□□□ -0.47
CCNC-203ENST00000369220 IFIT3O14879 490 aaKnown RBP12.13□□□□□ -0.47
CCNC-203ENST00000369220 HOXA7P31268 230 aaPredicted RBP12.13□□□□□ -0.47
CCNC-203ENST00000369220 CAP1Q01518 475 aa12.13□□□□□ -0.47
CCNC-203ENST00000369220 OTUD7BQ6GQQ9 843 aa12.13□□□□□ -0.47
CCNC-203ENST00000369220 KCTD1Q719H9 257 aa12.13□□□□□ -0.47
CCNC-203ENST00000369220 DGKHQ86XP1 1220 aa12.13□□□□□ -0.47
CCNC-203ENST00000369220 POTEDQ86YR6 584 aa12.13□□□□□ -0.47
CCNC-203ENST00000369220 GMCL1P1Q8NEA9 526 aa12.13□□□□□ -0.47
CCNC-203ENST00000369220 P2RX7Q99572 595 aaKnown RBP12.13□□□□□ -0.47
CCNC-203ENST00000369220 CPA4Q9UI42 421 aa12.13□□□□□ -0.47
CCNC-203ENST00000369220 TLR2O60603 784 aa12.12□□□□□ -0.47
CCNC-203ENST00000369220 ALDH1A1P00352 501 aa12.12□□□□□ -0.47
CCNC-203ENST00000369220 TOP1P11387 765 aaKnown RBP12.12□□□□□ -0.47
CCNC-203ENST00000369220 CASTP20810 708 aaKnown RBP12.12□□□□□ -0.47
CCNC-203ENST00000369220 MCM5P33992 734 aa12.12□□□□□ -0.47
CCNC-203ENST00000369220 IRX3P78415 501 aaPredicted RBP12.12□□□□□ -0.47
CCNC-203ENST00000369220 IFIT1BQ5T764 474 aaKnown RBP12.12□□□□□ -0.47
CCNC-203ENST00000369220 SLFN13Q68D06 897 aa12.12□□□□□ -0.47
CCNC-203ENST00000369220 CATSPERGQ6ZRH7 1159 aa12.12□□□□□ -0.47
CCNC-203ENST00000369220 PNMA1Q8ND90 353 aa12.12□□□□□ -0.47
CCNC-203ENST00000369220 TTC14Q96N46 770 aa12.12□□□□□ -0.47
CCNC-203ENST00000369220 TXNRD2Q9NNW7 524 aa12.12□□□□□ -0.47
CCNC-203ENST00000369220 ISY1Q9ULR0 285 aaKnown RBP12.12□□□□□ -0.47
CCNC-203ENST00000369220 ADGRA2Q96PE1 1338 aa12.12□□□□□ -0.47
CCNC-203ENST00000369220 WDR46O15213 610 aaKnown RBP12.11□□□□□ -0.47
CCNC-203ENST00000369220 EPB41L2O43491 1005 aaKnown RBP12.11□□□□□ -0.47
CCNC-203ENST00000369220 FLOT1O75955 427 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 GOLGA8HP0CJ92 632 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 PDHBP11177 359 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 SLC1A4P43007 532 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 LBX1P52954 281 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 HERVK_113P62684 666 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 TMEM67Q5HYA8 995 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 PARK7Q99497 189 aaKnown RBP12.11□□□□□ -0.47
CCNC-203ENST00000369220 MYL10Q9BUA6 226 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 CPVLQ9H3G5 476 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 LY9Q9HBG7 655 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 SAGE1Q9NXZ1 904 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 FRMPD2Q68DX3 1309 aaPredicted RBP12.11□□□□□ -0.47
CCNC-203ENST00000369220 RLFQ13129 1914 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 CASP8AP2Q9UKL3 1982 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 SPDYE16A6NNV3 312 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms