RNA–Protein interactions for RNA: ENST00000368935.1

PRUNE1-203, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 1 (best) BASIC

Gene PRUNE1, Length 2,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-203ENST00000368935 NOM1Q5C9Z4 860 aaKnown RBP11.3□□□□□ -0.6
PRUNE1-203ENST00000368935 PPFIBP1Q86W92 1011 aa11.3□□□□□ -0.6
PRUNE1-203ENST00000368935 SMYD4Q8IYR2 804 aaPredicted RBP11.3□□□□□ -0.6
PRUNE1-203ENST00000368935 IGSF22Q8N9C0 903 aa11.3□□□□□ -0.6
PRUNE1-203ENST00000368935 KIAA1551Q9HCM1 1747 aa11.3□□□□□ -0.6
PRUNE1-203ENST00000368935 ADD3Q9UEY8 706 aaKnown RBP11.3□□□□□ -0.6
PRUNE1-203ENST00000368935 LOC102724428A0A0B4J2F2 783 aa11.29□□□□□ -0.6
PRUNE1-203ENST00000368935 PCP11498 1178 aaKnown RBP11.29□□□□□ -0.6
PRUNE1-203ENST00000368935 PBX1P40424 430 aa11.29□□□□□ -0.6
PRUNE1-203ENST00000368935 SIK1P57059 783 aa11.29□□□□□ -0.6
PRUNE1-203ENST00000368935 ATP2C1P98194 919 aaPredicted RBP11.29□□□□□ -0.6
PRUNE1-203ENST00000368935 RBL2Q08999 1139 aa11.29□□□□□ -0.6
PRUNE1-203ENST00000368935 ITPK1Q13572 414 aa11.29□□□□□ -0.6
PRUNE1-203ENST00000368935 UBE4AQ14139 1066 aa11.29□□□□□ -0.6
PRUNE1-203ENST00000368935 ZNF174Q15697 407 aa11.29□□□□□ -0.6
PRUNE1-203ENST00000368935 TEX35Q5T0J7 233 aa11.29□□□□□ -0.6
PRUNE1-203ENST00000368935 ANKRD18AQ8IVF6 992 aa11.29□□□□□ -0.6
PRUNE1-203ENST00000368935 CTAGE1Q96RT6 745 aa11.29□□□□□ -0.6
PRUNE1-203ENST00000368935 NAA15Q9BXJ9 866 aaKnown RBP11.29□□□□□ -0.6
PRUNE1-203ENST00000368935 WTIPA6NIX2 430 aaPredicted RBP11.29□□□□□ -0.6
PRUNE1-203ENST00000368935 PPP1R3GB7ZBB8 358 aa11.29□□□□□ -0.6
PRUNE1-203ENST00000368935 SEMA3EO15041 775 aa11.29□□□□□ -0.6
PRUNE1-203ENST00000368935 MFAP3LO75121 409 aa11.29□□□□□ -0.6
PRUNE1-203ENST00000368935 FGRP09769 529 aa11.29□□□□□ -0.6
PRUNE1-203ENST00000368935 PLA2G4AP47712 749 aa11.29□□□□□ -0.6
PRUNE1-203ENST00000368935 PTGDRQ13258 359 aa11.29□□□□□ -0.6
PRUNE1-203ENST00000368935 PPP4R3CPQ6ZMV5 832 aa11.29□□□□□ -0.6
PRUNE1-203ENST00000368935 CCDC12Q8WUD4 166 aaPredicted RBP11.29□□□□□ -0.6
PRUNE1-203ENST00000368935 CTNND2Q9UQB3 1225 aa11.29□□□□□ -0.6
PRUNE1-203ENST00000368935 CCDC88AQ3V6T2 1871 aa11.29□□□□□ -0.6
PRUNE1-203ENST00000368935 XDHP47989 1333 aa11.29□□□□□ -0.6
PRUNE1-203ENST00000368935 SEC31AO94979 1220 aaKnown RBP11.28□□□□□ -0.6
PRUNE1-203ENST00000368935 FILIP1LQ4L180 1135 aa11.28□□□□□ -0.6
PRUNE1-203ENST00000368935 CAVIN4Q5BKX8 364 aa11.28□□□□□ -0.6
PRUNE1-203ENST00000368935 CTR9Q6PD62 1173 aa11.28□□□□□ -0.6
PRUNE1-203ENST00000368935 RAD9BQ6WBX8 426 aa11.28□□□□□ -0.6
PRUNE1-203ENST00000368935 RSRC2Q7L4I2 434 aaKnown RBP11.28□□□□□ -0.6
PRUNE1-203ENST00000368935 GPR161Q8N6U8 529 aaKnown RBP11.28□□□□□ -0.6
PRUNE1-203ENST00000368935 CTCFLQ8NI51 663 aaPredicted RBP11.28□□□□□ -0.6
PRUNE1-203ENST00000368935 ZNF384Q8TF68 577 aa11.28□□□□□ -0.6
PRUNE1-203ENST00000368935 ACSBG1Q96GR2 724 aa11.28□□□□□ -0.6
PRUNE1-203ENST00000368935 EPC1Q9H2F5 836 aa11.28□□□□□ -0.6
PRUNE1-203ENST00000368935 ZNF652Q9Y2D9 606 aa11.28□□□□□ -0.6
PRUNE1-203ENST00000368935 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.28□□□□□ -0.6
PRUNE1-203ENST00000368935 ADGRG1Q9Y653 693 aa11.28□□□□□ -0.6
PRUNE1-203ENST00000368935 FAM193AP78312 1265 aa11.28□□□□□ -0.6
PRUNE1-203ENST00000368935 E2F4Q16254 413 aa11.28□□□□□ -0.6
PRUNE1-203ENST00000368935 C3orf67Q6ZVT6 689 aa11.28□□□□□ -0.6
PRUNE1-203ENST00000368935 CREBRFQ8IUR6 639 aa11.28□□□□□ -0.6
PRUNE1-203ENST00000368935 CPLX3Q8WVH0 158 aa11.28□□□□□ -0.6
PRUNE1-203ENST00000368935 STAMQ92783 540 aa11.28□□□□□ -0.6
PRUNE1-203ENST00000368935 LZTFL1Q9NQ48 299 aa11.28□□□□□ -0.6
PRUNE1-203ENST00000368935 NRAPQ86VF7 1730 aa11.27□□□□□ -0.6
PRUNE1-203ENST00000368935 USP17L12C9JPN9 530 aa11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 USP17L21D6R901 530 aa11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 ORC4O43929 436 aa11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 NMT2O60551 498 aa11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 GYPCP04921 128 aa11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 KCNA4P22459 653 aa11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 CASP14P31944 242 aa11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 EVX2Q03828 476 aa11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 ERFEQ4G0M1 354 aa11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 CC2D1AQ6P1N0 951 aaPredicted RBP11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 PIK3AP1Q6ZUJ8 805 aa11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 CNGA4Q8IV77 575 aa11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 SRBD1Q8N5C6 995 aaKnown RBP11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 IQUBQ8NA54 791 aa11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 RABGGTAQ92696 567 aa11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 GOLGA1Q92805 767 aa11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 IRX2Q9BZI1 471 aaPredicted RBP11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 BSDC1Q9NW68 430 aaPredicted RBP11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 ITIH6Q6UXX5 1313 aa11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 SCG2P13521 617 aa11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 CCT6AP40227 531 aaKnown RBP11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 TRAPPC10P48553 1259 aa11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 DDB1Q16531 1140 aa11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 PDXDC2PQ6P474 469 aa11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 FAM84BQ96KN1 310 aaPredicted RBP11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 BLZF1Q9H2G9 400 aa11.27□□□□□ -0.61
PRUNE1-203ENST00000368935 MYH1P12882 1939 aa11.26□□□□□ -0.61
PRUNE1-203ENST00000368935 A0A0U1RQJ8 604 aa11.26□□□□□ -0.61
PRUNE1-203ENST00000368935 ATP8B1O43520 1251 aa11.26□□□□□ -0.61
PRUNE1-203ENST00000368935 KIF5CO60282 957 aa11.26□□□□□ -0.61
PRUNE1-203ENST00000368935 TBC1D8O95759 1140 aa11.26□□□□□ -0.61
PRUNE1-203ENST00000368935 NLRP5P59047 1200 aa11.26□□□□□ -0.61
PRUNE1-203ENST00000368935 KRT31Q15323 416 aa11.26□□□□□ -0.61
PRUNE1-203ENST00000368935 SF3B3Q15393 1217 aaKnown RBP11.26□□□□□ -0.61
PRUNE1-203ENST00000368935 RASGRP2Q7LDG7 609 aa11.26□□□□□ -0.61
PRUNE1-203ENST00000368935 ATRIPQ8WXE1 791 aa11.26□□□□□ -0.61
PRUNE1-203ENST00000368935 NSUN4Q96CB9 384 aaKnown RBP11.26□□□□□ -0.61
PRUNE1-203ENST00000368935 CCDC51Q96ER9 411 aa11.26□□□□□ -0.61
PRUNE1-203ENST00000368935 PYM1Q9BRP8 204 aaKnown RBP11.26□□□□□ -0.61
PRUNE1-203ENST00000368935 CDCA7Q9BWT1 371 aaPredicted RBP11.26□□□□□ -0.61
PRUNE1-203ENST00000368935 MINPP1Q9UNW1 487 aa11.26□□□□□ -0.61
PRUNE1-203ENST00000368935 GTPBP6O43824 516 aaPredicted RBP11.25□□□□□ -0.61
PRUNE1-203ENST00000368935 COBLO75128 1261 aa11.25□□□□□ -0.61
PRUNE1-203ENST00000368935 SASH3O75995 380 aa11.25□□□□□ -0.61
PRUNE1-203ENST00000368935 FECHP22830 423 aa11.25□□□□□ -0.61
PRUNE1-203ENST00000368935 MCM7P33993 719 aa11.25□□□□□ -0.61
PRUNE1-203ENST00000368935 FXR1P51114 621 aaKnown RBP eCLIP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 198.4 ms