RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 AATFQ9NY61 560 aaKnown RBP eCLIP11.86□□□□□ -0.51
LYSMD1-201ENST00000368908 FBXO3Q9UK99 471 aa11.86□□□□□ -0.51
LYSMD1-201ENST00000368908 GPAA1O43292 621 aa11.86□□□□□ -0.51
LYSMD1-201ENST00000368908 IL2RBP14784 551 aa11.86□□□□□ -0.51
LYSMD1-201ENST00000368908 PIP4K2AP48426 406 aaPredicted RBP11.86□□□□□ -0.51
LYSMD1-201ENST00000368908 IRAK1P51617 712 aa11.86□□□□□ -0.51
LYSMD1-201ENST00000368908 SPECC1Q5M775 1068 aa11.86□□□□□ -0.51
LYSMD1-201ENST00000368908 SEPT12Q8IYM1 358 aa11.86□□□□□ -0.51
LYSMD1-201ENST00000368908 CNPY4Q8N129 248 aa11.86□□□□□ -0.51
LYSMD1-201ENST00000368908 FAM217BQ9NTX9 383 aaPredicted RBP11.86□□□□□ -0.51
LYSMD1-201ENST00000368908 FAM169AQ9Y6X4 670 aa11.86□□□□□ -0.51
LYSMD1-201ENST00000368908 CD44P16070 742 aaKnown RBP11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 IFNAR1P17181 557 aa11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 LIFRP42702 1097 aa11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 GRIN1Q05586 938 aa11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 GRAMD1CQ8IYS0 662 aa11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 TACO1Q9BSH4 297 aaKnown RBP11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 PLEKHA4Q9H4M7 779 aa11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 KAT14Q9H8E8 782 aa11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 SEC31BQ9NQW1 1179 aa11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 AKAP11Q9UKA4 1901 aa11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 MYH6P13533 1939 aa11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 SHANK3Q9BYB0 1731 aa11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 CCDC196A0A1B0GTZ2 297 aa11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 SHTN1A0MZ66 631 aa11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 GOLGA6CA6NDK9 693 aa11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 PPP1R3GB7ZBB8 358 aa11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 GOLGA8KD6RF30 607 aa11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 ANKRD65E5RJM6 399 aa11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 AGPSO00116 658 aa11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 GOLGA6DP0CG33 693 aa11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 GGCXP38435 758 aa11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 IQCEQ6IPM2 695 aa11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 SPATS2Q86XZ4 545 aaKnown RBP11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 TBC1D10CQ8IV04 446 aa11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 DIS3L2Q8IYB7 885 aaKnown RBP11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 IGDCC4Q8TDY8 1250 aa11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 KAT2BQ92831 832 aa11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 PUS7LQ9H0K6 701 aaKnown RBP11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 A1CFQ9NQ94 594 aaKnown RBP11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 GOLGA6AQ9NYA3 693 aa11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 SAR1BQ9Y6B6 198 aa11.85□□□□□ -0.51
LYSMD1-201ENST00000368908 MEGF6O75095 1541 aa11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 ANO9A1A5B4 782 aa11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 ATP5J2-PTCD1G3V325 749 aa11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 EIF3HO15372 352 aaKnown RBP eCLIP11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 PTCD1O75127 700 aaKnown RBP11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 NDUFA10O95299 355 aa11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 ABL1P00519 1130 aa11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 CCT5P48643 541 aa11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 FKBP4Q02790 459 aaKnown RBP eCLIP11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 SLC39A6Q13433 755 aa11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 CCNI2Q6ZMN8 369 aaPredicted RBP11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 MICU3Q86XE3 530 aa11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 ZNF496Q96IT1 587 aaPredicted RBP11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 SELENOOQ9BVL4 669 aa11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 LY9Q9HBG7 655 aa11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 REXO2Q9Y3B8 237 aaKnown RBP11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 HNRNPH1P31943 449 aaKnown RBP11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 PSEN1P49768 467 aa11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 SKOR1P84550 965 aa11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 DPYDQ12882 1025 aa11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 SART3Q15020 963 aaKnown RBP11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 KRT31Q15323 416 aa11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 LRRC24Q50LG9 513 aa11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 ANKRD20A12PQ8NF67 263 aa11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 AENQ8WTP8 325 aaKnown RBP11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 MMS19Q96T76 1030 aa11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 SH3GL2Q99962 352 aa11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 SLF1Q9BQI6 1058 aa11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 SLC26A6Q9BXS9 759 aa11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 CAPS2Q9BXY5 557 aa11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 CEP126Q9P2H0 1117 aa11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 FAM184BQ9ULE4 1060 aa11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 EPN1Q9Y6I3 576 aaPredicted RBP11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 GRIN2DO15399 1336 aa11.84□□□□□ -0.51
LYSMD1-201ENST00000368908 GOLGA6BA6NDN3 693 aa11.83□□□□□ -0.52
LYSMD1-201ENST00000368908 BTBD18B2RXH4 712 aa11.83□□□□□ -0.52
LYSMD1-201ENST00000368908 EPB41P11171 864 aaKnown RBP11.83□□□□□ -0.52
LYSMD1-201ENST00000368908 COPB1P53618 953 aaKnown RBP11.83□□□□□ -0.52
LYSMD1-201ENST00000368908 AMOTL1Q8IY63 956 aa11.83□□□□□ -0.52
LYSMD1-201ENST00000368908 PRPF38AQ8NAV1 312 aaKnown RBP11.83□□□□□ -0.52
LYSMD1-201ENST00000368908 NUP88Q99567 741 aaPredicted RBP11.83□□□□□ -0.52
LYSMD1-201ENST00000368908 CSRNP2Q9H175 543 aa11.83□□□□□ -0.52
LYSMD1-201ENST00000368908 CXorf56Q9H5V9 222 aa11.83□□□□□ -0.52
LYSMD1-201ENST00000368908 CWC25Q9NXE8 425 aaPredicted RBP11.83□□□□□ -0.52
LYSMD1-201ENST00000368908 BCL9O00512 1426 aa11.83□□□□□ -0.52
LYSMD1-201ENST00000368908 N4BP3O15049 544 aa11.83□□□□□ -0.52
LYSMD1-201ENST00000368908 TATP17735 454 aaPredicted RBP11.83□□□□□ -0.52
LYSMD1-201ENST00000368908 LIG3P49916 1009 aa11.83□□□□□ -0.52
LYSMD1-201ENST00000368908 ITIH3Q06033 890 aa11.83□□□□□ -0.52
LYSMD1-201ENST00000368908 CCDC70Q6NSX1 233 aa11.83□□□□□ -0.52
LYSMD1-201ENST00000368908 KCNV1Q6PIU1 500 aa11.83□□□□□ -0.52
LYSMD1-201ENST00000368908 RAPGEF4Q8WZA2 1011 aa11.83□□□□□ -0.52
LYSMD1-201ENST00000368908 PAGE5Q96GU1 130 aa11.83□□□□□ -0.52
LYSMD1-201ENST00000368908 PAGR1Q9BTK6 254 aa11.83□□□□□ -0.52
LYSMD1-201ENST00000368908 RWDD2AQ9UIY3 292 aa11.83□□□□□ -0.52
LYSMD1-201ENST00000368908 MYH2Q9UKX2 1941 aa11.83□□□□□ -0.52
LYSMD1-201ENST00000368908 KIF1CO43896 1103 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms