RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 DUSP4Q13115 394 aa6.17□□□□□ -1.42
ECHDC1-201ENST00000368287 PUM1Q14671 1186 aaKnown RBP eCLIP6.17□□□□□ -1.42
ECHDC1-201ENST00000368287 VMACQ2NL98 169 aa6.17□□□□□ -1.42
ECHDC1-201ENST00000368287 PCNX4Q63HM2 1172 aa6.17□□□□□ -1.42
ECHDC1-201ENST00000368287 TSPYL5Q86VY4 417 aaPredicted RBP6.17□□□□□ -1.42
ECHDC1-201ENST00000368287 ADAM7Q9H2U9 754 aa6.17□□□□□ -1.42
ECHDC1-201ENST00000368287 SIRT5Q9NXA8 310 aa6.17□□□□□ -1.42
ECHDC1-201ENST00000368287 PCDHA11Q9Y5I1 949 aa6.17□□□□□ -1.42
ECHDC1-201ENST00000368287 ZC3H12DA2A288 527 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-201ENST00000368287 ADGRF1Q5T601 910 aa6.16□□□□□ -1.42
ECHDC1-201ENST00000368287 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-201ENST00000368287 ANKS4BQ8N8V4 417 aa6.16□□□□□ -1.42
ECHDC1-201ENST00000368287 SYT8Q8NBV8 401 aa6.16□□□□□ -1.42
ECHDC1-201ENST00000368287 DPH2Q9BQC3 489 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-201ENST00000368287 GPR62Q9BZJ7 368 aa6.16□□□□□ -1.42
ECHDC1-201ENST00000368287 EPHB3P54753 998 aa6.15□□□□□ -1.42
ECHDC1-201ENST00000368287 SIRT2Q8IXJ6 389 aa6.15□□□□□ -1.42
ECHDC1-201ENST00000368287 SHISA4Q96DD7 197 aa6.15□□□□□ -1.42
ECHDC1-201ENST00000368287 BDH2Q9BUT1 245 aa6.15□□□□□ -1.42
ECHDC1-201ENST00000368287 RBCK1Q9BYM8 510 aa6.15□□□□□ -1.42
ECHDC1-201ENST00000368287 HRKO00198 91 aa6.14□□□□□ -1.43
ECHDC1-201ENST00000368287 N4BP3O15049 544 aa6.14□□□□□ -1.43
ECHDC1-201ENST00000368287 CELA3AP09093 270 aa6.14□□□□□ -1.43
ECHDC1-201ENST00000368287 GAL3ST3Q96A11 431 aa6.14□□□□□ -1.43
ECHDC1-201ENST00000368287 GPR20Q99678 358 aa6.14□□□□□ -1.43
ECHDC1-201ENST00000368287 LUC7LQ9NQ29 371 aaKnown RBP6.14□□□□□ -1.43
ECHDC1-201ENST00000368287 KCNH3Q9ULD8 1083 aa6.14□□□□□ -1.43
ECHDC1-201ENST00000368287 ADAMTS20P59510 1910 aa6.14□□□□□ -1.43
ECHDC1-201ENST00000368287 PNMA6FA0A0J9YX94 578 aa6.13□□□□□ -1.43
ECHDC1-201ENST00000368287 CDK8P49336 464 aa6.13□□□□□ -1.43
ECHDC1-201ENST00000368287 TMCO4Q5TGY1 634 aa6.13□□□□□ -1.43
ECHDC1-201ENST00000368287 CNKSR3Q6P9H4 555 aa6.13□□□□□ -1.43
ECHDC1-201ENST00000368287 SND1Q7KZF4 910 aaKnown RBP eCLIP6.13□□□□□ -1.43
ECHDC1-201ENST00000368287 FRMD5Q7Z6J6 570 aa6.13□□□□□ -1.43
ECHDC1-201ENST00000368287 MRPL41Q8IXM3 137 aaKnown RBP6.13□□□□□ -1.43
ECHDC1-201ENST00000368287 SRCIN1Q9C0H9 1055 aa6.13□□□□□ -1.43
ECHDC1-201ENST00000368287 EPB41L4AQ9HCS5 686 aaPredicted RBP6.13□□□□□ -1.43
ECHDC1-201ENST00000368287 TJP2Q9UDY2 1190 aa6.13□□□□□ -1.43
ECHDC1-201ENST00000368287 MYRFQ9Y2G1 1151 aa6.13□□□□□ -1.43
ECHDC1-201ENST00000368287 SUV39H1O43463 412 aa6.12□□□□□ -1.43
ECHDC1-201ENST00000368287 DTWD2Q8NBA8 298 aa6.12□□□□□ -1.43
ECHDC1-201ENST00000368287 DNAJB8Q8NHS0 232 aa6.12□□□□□ -1.43
ECHDC1-201ENST00000368287 DCTN4Q9UJW0 460 aa6.12□□□□□ -1.43
ECHDC1-201ENST00000368287 PGRP06401 933 aa6.11□□□□□ -1.43
ECHDC1-201ENST00000368287 MAPK1P28482 360 aa6.11□□□□□ -1.43
ECHDC1-201ENST00000368287 MFAP1P55081 439 aaKnown RBP6.11□□□□□ -1.43
ECHDC1-201ENST00000368287 SLC6A19Q695T7 634 aa6.11□□□□□ -1.43
ECHDC1-201ENST00000368287 ZSCAN29Q8IWY8 852 aaPredicted RBP6.11□□□□□ -1.43
ECHDC1-201ENST00000368287 ANKRD24Q8TF21 1146 aa6.11□□□□□ -1.43
ECHDC1-201ENST00000368287 TMEM87BQ96K49 555 aa6.11□□□□□ -1.43
ECHDC1-201ENST00000368287 CNTD2Q9H8S5 307 aa6.11□□□□□ -1.43
ECHDC1-201ENST00000368287 EBF1Q9UH73 591 aa6.11□□□□□ -1.43
ECHDC1-201ENST00000368287 CEP131Q9UPN4 1083 aa6.11□□□□□ -1.43
ECHDC1-201ENST00000368287 IRS4O14654 1257 aaPredicted RBP6.1□□□□□ -1.43
ECHDC1-201ENST00000368287 CILPO75339 1184 aa6.1□□□□□ -1.43
ECHDC1-201ENST00000368287 VIPR1P32241 457 aa6.1□□□□□ -1.43
ECHDC1-201ENST00000368287 TMC7Q7Z402 723 aa6.1□□□□□ -1.43
ECHDC1-201ENST00000368287 NLRX1Q86UT6 975 aa6.1□□□□□ -1.43
ECHDC1-201ENST00000368287 PALD1Q9ULE6 856 aa6.1□□□□□ -1.43
ECHDC1-201ENST00000368287 TACC3Q9Y6A5 838 aa6.1□□□□□ -1.43
ECHDC1-201ENST00000368287 AKAP8O43823 692 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-201ENST00000368287 TEKQ02763 1124 aa6.09□□□□□ -1.43
ECHDC1-201ENST00000368287 ENOX2Q16206 610 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-201ENST00000368287 OLFML2BQ68BL8 750 aa6.09□□□□□ -1.43
ECHDC1-201ENST00000368287 HHIPL2Q6UWX4 724 aa6.09□□□□□ -1.43
ECHDC1-201ENST00000368287 LINC01356Q8N9X3 169 aa6.09□□□□□ -1.43
ECHDC1-201ENST00000368287 MZB1Q8WU39 189 aa6.09□□□□□ -1.43
ECHDC1-201ENST00000368287 LINC01599Q8WXQ3 324 aa6.09□□□□□ -1.43
ECHDC1-201ENST00000368287 CDR1P51861 262 aa6.08□□□□□ -1.44
ECHDC1-201ENST00000368287 RTP5Q14D33 572 aa6.08□□□□□ -1.44
ECHDC1-201ENST00000368287 FAM129CQ86XR2 697 aa6.08□□□□□ -1.44
ECHDC1-201ENST00000368287 TMEFF1Q8IYR6 380 aa6.08□□□□□ -1.44
ECHDC1-201ENST00000368287 RGS22Q8NE09 1264 aa6.08□□□□□ -1.44
ECHDC1-201ENST00000368287 CCDC9Q9Y3X0 531 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-201ENST00000368287 NOTOA8MTQ0 251 aa6.07□□□□□ -1.44
ECHDC1-201ENST00000368287 GFRA2O00451 464 aa6.07□□□□□ -1.44
ECHDC1-201ENST00000368287 USP2O75604 605 aaPredicted RBP6.07□□□□□ -1.44
ECHDC1-201ENST00000368287 LMNB1P20700 586 aa6.07□□□□□ -1.44
ECHDC1-201ENST00000368287 PLCB3Q01970 1234 aa6.07□□□□□ -1.44
ECHDC1-201ENST00000368287 SLC14A2Q15849 920 aa6.07□□□□□ -1.44
ECHDC1-201ENST00000368287 TTBK2Q6IQ55 1244 aa6.07□□□□□ -1.44
ECHDC1-201ENST00000368287 PWWP2AQ96N64 755 aa6.07□□□□□ -1.44
ECHDC1-201ENST00000368287 OSBPL7Q9BZF2 842 aa6.07□□□□□ -1.44
ECHDC1-201ENST00000368287 CRTAC1Q9NQ79 661 aa6.07□□□□□ -1.44
ECHDC1-201ENST00000368287 K7ESM1 405 aa6.06□□□□□ -1.44
ECHDC1-201ENST00000368287 PRICKLE3O43900 615 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-201ENST00000368287 PDE4BQ07343 736 aa6.06□□□□□ -1.44
ECHDC1-201ENST00000368287 ZNF827Q17R98 1081 aa6.06□□□□□ -1.44
ECHDC1-201ENST00000368287 CCDC27Q2M243 656 aa6.06□□□□□ -1.44
ECHDC1-201ENST00000368287 MCATQ8IVS2 390 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-201ENST00000368287 CRELD1Q96HD1 420 aa6.06□□□□□ -1.44
ECHDC1-201ENST00000368287 G6PC3Q9BUM1 346 aa6.06□□□□□ -1.44
ECHDC1-201ENST00000368287 ABLIM1O14639 778 aa6.05□□□□□ -1.44
ECHDC1-201ENST00000368287 LRRN2O75325 713 aa6.05□□□□□ -1.44
ECHDC1-201ENST00000368287 EFEMP2O95967 443 aa6.05□□□□□ -1.44
ECHDC1-201ENST00000368287 SDHBP21912 280 aa6.05□□□□□ -1.44
ECHDC1-201ENST00000368287 YBX1P67809 324 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-201ENST00000368287 ZXDAP98168 799 aa6.05□□□□□ -1.44
ECHDC1-201ENST00000368287 KRTAP1-1Q07627 177 aa6.05□□□□□ -1.44
ECHDC1-201ENST00000368287 SEPT6Q14141 434 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms