RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 LRRC43Q8N309 656 aa13.65□□□□□ -0.22
TPR-201ENST00000367478 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.65□□□□□ -0.22
TPR-201ENST00000367478 F8W8V4 182 aa13.65□□□□□ -0.22
TPR-201ENST00000367478 SRRM1Q8IYB3 904 aaKnown RBP13.65□□□□□ -0.22
TPR-201ENST00000367478 USTQ9Y2C2 406 aa13.65□□□□□ -0.22
TPR-201ENST00000367478 ANAPC5Q9UJX4 755 aa13.65□□□□□ -0.23
TPR-201ENST00000367478 DENND2AQ9ULE3 1009 aa13.65□□□□□ -0.23
TPR-201ENST00000367478 HYOU1Q9Y4L1 999 aa13.65□□□□□ -0.23
TPR-201ENST00000367478 ADCY8P40145 1251 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 BEND3Q5T5X7 828 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 SERPINI1Q99574 410 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 MAST3O60307 1309 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 CUL7Q14999 1698 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 E9PMD0 336 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 SRGAP2BP0DMP2 458 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 GNGT1P63211 74 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 PPP1R2P3Q6NXS1 205 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 GNGT2O14610 69 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 SESN3P58005 492 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 STX1BP61266 288 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 ZNF449Q6P9G9 518 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 AZI2Q9H6S1 392 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 BZW2Q9Y6E2 419 aaKnown RBP13.64□□□□□ -0.23
TPR-201ENST00000367478 EXOC3O60645 756 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 RPS6KB1P23443 525 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 POLR3CQ9BUI4 534 aaPredicted RBP13.64□□□□□ -0.23
TPR-201ENST00000367478 EEF1DP29692 281 aaKnown RBP13.64□□□□□ -0.23
TPR-201ENST00000367478 CCDC197Q8NCU1 140 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 JDP2Q8WYK2 163 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 IFT122Q9HBG6 1241 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 RFX1P22670 979 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 PEX19P40855 299 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 TPTE2Q6XPS3 522 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 BCAS4Q8TDM0 211 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 AOX1Q06278 1338 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 PHF8Q9UPP1 1060 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 HNRNPCL2B2RXH8 293 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 HNRNPCL1O60812 293 aaKnown RBP13.64□□□□□ -0.23
TPR-201ENST00000367478 HARSP12081 509 aaKnown RBP13.64□□□□□ -0.23
TPR-201ENST00000367478 ZNF174Q15697 407 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 CEP19Q96LK0 163 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 ANGPTL2Q9UKU9 493 aa13.64□□□□□ -0.23
TPR-201ENST00000367478 IGSF3O75054 1194 aa13.63□□□□□ -0.23
TPR-201ENST00000367478 STAM2O75886 525 aa13.63□□□□□ -0.23
TPR-201ENST00000367478 NBPF14Q5TI25 921 aa13.63□□□□□ -0.23
TPR-201ENST00000367478 ATP6V0A1Q93050 837 aa13.63□□□□□ -0.23
TPR-201ENST00000367478 HDAC11Q96DB2 347 aa13.63□□□□□ -0.23
TPR-201ENST00000367478 TRIM15Q9C019 465 aa13.63□□□□□ -0.23
TPR-201ENST00000367478 CHPF2Q9P2E5 772 aa13.63□□□□□ -0.23
TPR-201ENST00000367478 HERC4Q5GLZ8 1057 aaPredicted RBP13.63□□□□□ -0.23
TPR-201ENST00000367478 OR8K1Q8NGG5 319 aa13.63□□□□□ -0.23
TPR-201ENST00000367478 ATP8B1O43520 1251 aa13.63□□□□□ -0.23
TPR-201ENST00000367478 NELFBQ8WX92 580 aa13.63□□□□□ -0.23
TPR-201ENST00000367478 FGFR1OP2Q9NVK5 253 aa13.63□□□□□ -0.23
TPR-201ENST00000367478 GPC4O75487 556 aa13.63□□□□□ -0.23
TPR-201ENST00000367478 TRIM60Q495X7 471 aa13.63□□□□□ -0.23
TPR-201ENST00000367478 CCHCR1Q8TD31 782 aa13.63□□□□□ -0.23
TPR-201ENST00000367478 MAD1L1Q9Y6D9 718 aa13.63□□□□□ -0.23
TPR-201ENST00000367478 MYCT1Q8N699 235 aa13.63□□□□□ -0.23
TPR-201ENST00000367478 ANKRD42Q8N9B4 389 aa13.63□□□□□ -0.23
TPR-201ENST00000367478 NGLY1Q96IV0 654 aa13.63□□□□□ -0.23
TPR-201ENST00000367478 NR1I2O75469 434 aa13.63□□□□□ -0.23
TPR-201ENST00000367478 CNOT10Q9H9A5 744 aaKnown RBP13.63□□□□□ -0.23
TPR-201ENST00000367478 ARHGEF9O43307 516 aa13.62□□□□□ -0.23
TPR-201ENST00000367478 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.62□□□□□ -0.23
TPR-201ENST00000367478 SNAPC4Q5SXM2 1469 aa13.62□□□□□ -0.23
TPR-201ENST00000367478 INHBAP08476 426 aa13.62□□□□□ -0.23
TPR-201ENST00000367478 ATF7P17544 494 aaPredicted RBP13.62□□□□□ -0.23
TPR-201ENST00000367478 TTC38Q5R3I4 469 aa13.62□□□□□ -0.23
TPR-201ENST00000367478 LINS1Q8NG48 757 aa13.62□□□□□ -0.23
TPR-201ENST00000367478 FAM81BQ96LP2 452 aa13.62□□□□□ -0.23
TPR-201ENST00000367478 NFE2L3Q9Y4A8 694 aa13.62□□□□□ -0.23
TPR-201ENST00000367478 AK9Q5TCS8 1911 aa13.62□□□□□ -0.23
TPR-201ENST00000367478 IGHDP01880 384 aa13.62□□□□□ -0.23
TPR-201ENST00000367478 TCEANC2Q96MN5 208 aa13.62□□□□□ -0.23
TPR-201ENST00000367478 LMNAP02545 664 aaKnown RBP13.62□□□□□ -0.23
TPR-201ENST00000367478 ATF2P15336 505 aa13.62□□□□□ -0.23
TPR-201ENST00000367478 ECE1P42892 770 aa13.62□□□□□ -0.23
TPR-201ENST00000367478 C2CD5Q86YS7 1000 aa13.62□□□□□ -0.23
TPR-201ENST00000367478 C16orf71Q8IYS4 520 aaPredicted RBP13.62□□□□□ -0.23
TPR-201ENST00000367478 PRG4Q92954 1404 aaPredicted RBP13.62□□□□□ -0.23
TPR-201ENST00000367478 ZNF219Q9P2Y4 722 aaPredicted RBP13.62□□□□□ -0.23
TPR-201ENST00000367478 POTEB3A0JP26 581 aa13.62□□□□□ -0.23
TPR-201ENST00000367478 SEPT2Q15019 361 aa13.62□□□□□ -0.23
TPR-201ENST00000367478 POTEBQ6S5H4 581 aa13.62□□□□□ -0.23
TPR-201ENST00000367478 TMCO5AQ8N6Q1 288 aa13.62□□□□□ -0.23
TPR-201ENST00000367478 SLC17A8Q8NDX2 589 aa13.62□□□□□ -0.23
TPR-201ENST00000367478 PACSIN2Q9UNF0 486 aaPredicted RBP13.62□□□□□ -0.23
TPR-201ENST00000367478 PCDHB13Q9Y5F0 798 aa13.62□□□□□ -0.23
TPR-201ENST00000367478 CD19P15391 556 aa13.62□□□□□ -0.23
TPR-201ENST00000367478 USHBP1Q8N6Y0 703 aa13.61□□□□□ -0.23
TPR-201ENST00000367478 TEX12Q9BXU0 123 aa13.61□□□□□ -0.23
TPR-201ENST00000367478 DCTPP1Q9H773 170 aa13.61□□□□□ -0.23
TPR-201ENST00000367478 DAAM1Q9Y4D1 1078 aa13.61□□□□□ -0.23
TPR-201ENST00000367478 TTC25Q96NG3 672 aa13.61□□□□□ -0.23
TPR-201ENST00000367478 MAP3K7O43318 606 aa13.61□□□□□ -0.23
TPR-201ENST00000367478 ZKSCAN8Q15776 578 aaPredicted RBP13.61□□□□□ -0.23
TPR-201ENST00000367478 KRT80Q6KB66 452 aa13.61□□□□□ -0.23
TPR-201ENST00000367478 SCYL3Q8IZE3 742 aa13.61□□□□□ -0.23
TPR-201ENST00000367478 MEIS3Q99687 375 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms