RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 KIR3DL1P43629 444 aa7.63□□□□□ -1.19
RNU4-28P-201ENST00000364739 ANGEL2Q5VTE6 544 aaKnown RBP7.63□□□□□ -1.19
RNU4-28P-201ENST00000364739 CCDC81Q6ZN84 652 aa7.63□□□□□ -1.19
RNU4-28P-201ENST00000364739 CBLL1Q75N03 491 aa7.63□□□□□ -1.19
RNU4-28P-201ENST00000364739 DTWD2Q8NBA8 298 aa7.63□□□□□ -1.19
RNU4-28P-201ENST00000364739 DUSP15Q9H1R2 295 aaPredicted RBP7.63□□□□□ -1.19
RNU4-28P-201ENST00000364739 ACBD3Q9H3P7 528 aa7.63□□□□□ -1.19
RNU4-28P-201ENST00000364739 CARS2Q9HA77 564 aaKnown RBP7.63□□□□□ -1.19
RNU4-28P-201ENST00000364739 GINM1Q9NU53 330 aa7.63□□□□□ -1.19
RNU4-28P-201ENST00000364739 CDCP2Q5VXM1 449 aa7.62□□□□□ -1.19
RNU4-28P-201ENST00000364739 NLRC3Q7RTR2 1065 aa7.62□□□□□ -1.19
RNU4-28P-201ENST00000364739 VWCEQ96DN2 955 aa7.62□□□□□ -1.19
RNU4-28P-201ENST00000364739 ZNF512BQ96KM6 892 aaPredicted RBP7.62□□□□□ -1.19
RNU4-28P-201ENST00000364739 CNNM2Q9H8M5 875 aa7.62□□□□□ -1.19
RNU4-28P-201ENST00000364739 NME1P15531 152 aaKnown RBP7.61□□□□□ -1.19
RNU4-28P-201ENST00000364739 RAD51AP2Q09MP3 1159 aa7.61□□□□□ -1.19
RNU4-28P-201ENST00000364739 RUFY4Q6ZNE9 571 aa7.61□□□□□ -1.19
RNU4-28P-201ENST00000364739 LRRN4CLQ8ND94 238 aa7.61□□□□□ -1.19
RNU4-28P-201ENST00000364739 RNF141Q8WVD5 230 aa7.61□□□□□ -1.19
RNU4-28P-201ENST00000364739 TMEM40Q8WWA1 233 aa7.61□□□□□ -1.19
RNU4-28P-201ENST00000364739 COX4I2Q96KJ9 171 aa7.61□□□□□ -1.19
RNU4-28P-201ENST00000364739 FERD3LQ96RJ6 166 aa7.61□□□□□ -1.19
RNU4-28P-201ENST00000364739 RC3H2Q9HBD1 1191 aaKnown RBP7.61□□□□□ -1.19
RNU4-28P-201ENST00000364739 EFR3BQ9Y2G0 817 aa7.61□□□□□ -1.19
RNU4-28P-201ENST00000364739 SHISA3A0PJX4 238 aa7.6□□□□□ -1.19
RNU4-28P-201ENST00000364739 TPP2P29144 1249 aaPredicted RBP7.6□□□□□ -1.19
RNU4-28P-201ENST00000364739 CHMP4BP1P59074 171 aa7.6□□□□□ -1.19
RNU4-28P-201ENST00000364739 TMEM192Q8IY95 271 aa7.6□□□□□ -1.19
RNU4-28P-201ENST00000364739 PIWIL2Q8TC59 973 aaKnown RBP7.6□□□□□ -1.19
RNU4-28P-201ENST00000364739 SLC9A7Q96T83 725 aa7.6□□□□□ -1.19
RNU4-28P-201ENST00000364739 ZNRF3Q9ULT6 936 aa7.6□□□□□ -1.19
RNU4-28P-201ENST00000364739 ESR1P03372 595 aa7.59□□□□□ -1.19
RNU4-28P-201ENST00000364739 ACRP10323 421 aa7.59□□□□□ -1.19
RNU4-28P-201ENST00000364739 SLC23A3Q6PIS1 610 aa7.59□□□□□ -1.19
RNU4-28P-201ENST00000364739 KCNH3Q9ULD8 1083 aa7.59□□□□□ -1.19
RNU4-28P-201ENST00000364739 SRFP11831 508 aa7.58□□□□□ -1.2
RNU4-28P-201ENST00000364739 SNW1Q13573 536 aaKnown RBP7.58□□□□□ -1.2
RNU4-28P-201ENST00000364739 LRRFIP1Q32MZ4 808 aaKnown RBP7.58□□□□□ -1.2
RNU4-28P-201ENST00000364739 NBPF12Q5TAG4 269 aaPredicted RBP7.58□□□□□ -1.2
RNU4-28P-201ENST00000364739 CREG2Q8IUH2 290 aa7.58□□□□□ -1.2
RNU4-28P-201ENST00000364739 GPRASP2Q96D09 838 aa7.58□□□□□ -1.2
RNU4-28P-201ENST00000364739 MEIS3P2A8K0S8 358 aa7.57□□□□□ -1.2
RNU4-28P-201ENST00000364739 JAG1P78504 1218 aa7.57□□□□□ -1.2
RNU4-28P-201ENST00000364739 THAP5Q7Z6K1 395 aa7.57□□□□□ -1.2
RNU4-28P-201ENST00000364739 SLC6A18Q96N87 628 aa7.57□□□□□ -1.2
RNU4-28P-201ENST00000364739 ASPNQ9BXN1 380 aa7.57□□□□□ -1.2
RNU4-28P-201ENST00000364739 GPR62Q9BZJ7 368 aa7.57□□□□□ -1.2
RNU4-28P-201ENST00000364739 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.57□□□□□ -1.2
RNU4-28P-201ENST00000364739 MINPP1Q9UNW1 487 aa7.57□□□□□ -1.2
RNU4-28P-201ENST00000364739 TNFRSF10CO14798 259 aa7.56□□□□□ -1.2
RNU4-28P-201ENST00000364739 CLEC3AO75596 197 aa7.56□□□□□ -1.2
RNU4-28P-201ENST00000364739 ERCC5P28715 1186 aaPredicted RBP7.56□□□□□ -1.2
RNU4-28P-201ENST00000364739 ZYXQ15942 572 aaKnown RBP7.56□□□□□ -1.2
RNU4-28P-201ENST00000364739 OGFOD2Q6N063 350 aa7.56□□□□□ -1.2
RNU4-28P-201ENST00000364739 TMC3Q7Z5M5 1100 aa7.56□□□□□ -1.2
RNU4-28P-201ENST00000364739 TGIF2Q9GZN2 237 aa7.56□□□□□ -1.2
RNU4-28P-201ENST00000364739 FAM86C1Q9NVL1 165 aa7.56□□□□□ -1.2
RNU4-28P-201ENST00000364739 GPATCH2Q9NW75 528 aa7.56□□□□□ -1.2
RNU4-28P-201ENST00000364739 LMCD1Q9NZU5 365 aa7.56□□□□□ -1.2
RNU4-28P-201ENST00000364739 INPP5FQ9Y2H2 1132 aa7.56□□□□□ -1.2
RNU4-28P-201ENST00000364739 DNAJC25-GNG10A0A024R161 153 aa7.55□□□□□ -1.2
RNU4-28P-201ENST00000364739 NASPP49321 788 aaPredicted RBP7.55□□□□□ -1.2
RNU4-28P-201ENST00000364739 GAB4Q2WGN9 574 aa7.55□□□□□ -1.2
RNU4-28P-201ENST00000364739 NBPF9Q3BBW0 867 aa7.55□□□□□ -1.2
RNU4-28P-201ENST00000364739 RALGPS1Q5JS13 557 aa7.55□□□□□ -1.2
RNU4-28P-201ENST00000364739 TSPYL5Q86VY4 417 aaPredicted RBP7.55□□□□□ -1.2
RNU4-28P-201ENST00000364739 POU5F2Q8N7G0 328 aa7.55□□□□□ -1.2
RNU4-28P-201ENST00000364739 ASIC4Q96FT7 647 aa7.55□□□□□ -1.2
RNU4-28P-201ENST00000364739 TRIT1Q9H3H1 467 aaKnown RBP7.55□□□□□ -1.2
RNU4-28P-201ENST00000364739 SLAMF8Q9P0V8 285 aa7.55□□□□□ -1.2
RNU4-28P-201ENST00000364739 DUSP13Q9UII6 198 aa7.55□□□□□ -1.2
RNU4-28P-201ENST00000364739 C9IYK1 514 aa7.54□□□□□ -1.2
RNU4-28P-201ENST00000364739 PAPLNO95428 1278 aa7.54□□□□□ -1.2
RNU4-28P-201ENST00000364739 TCF3P15923 654 aa7.54□□□□□ -1.2
RNU4-28P-201ENST00000364739 GJA8P48165 433 aa7.54□□□□□ -1.2
RNU4-28P-201ENST00000364739 SOX9P48436 509 aa7.54□□□□□ -1.2
RNU4-28P-201ENST00000364739 CLEC16AQ2KHT3 1053 aa7.54□□□□□ -1.2
RNU4-28P-201ENST00000364739 TDRD10Q5VZ19 366 aaKnown RBP7.54□□□□□ -1.2
RNU4-28P-201ENST00000364739 LSRQ86X29 649 aaPredicted RBP7.54□□□□□ -1.2
RNU4-28P-201ENST00000364739 RASGRP4Q8TDF6 673 aa7.54□□□□□ -1.2
RNU4-28P-201ENST00000364739 PRDM14Q9GZV8 571 aa7.54□□□□□ -1.2
RNU4-28P-201ENST00000364739 ADAMTS10Q9H324 1103 aa7.54□□□□□ -1.2
RNU4-28P-201ENST00000364739 CCSER2Q9H7U1 834 aa7.54□□□□□ -1.2
RNU4-28P-201ENST00000364739 C19orf73Q9NVV2 129 aa7.54□□□□□ -1.2
RNU4-28P-201ENST00000364739 PCDHA11Q9Y5I1 949 aa7.54□□□□□ -1.2
RNU4-28P-201ENST00000364739 IMPDH2P12268 514 aa7.53□□□□□ -1.2
RNU4-28P-201ENST00000364739 ITGB5P18084 799 aa7.53□□□□□ -1.2
RNU4-28P-201ENST00000364739 EGR3Q06889 387 aa7.53□□□□□ -1.2
RNU4-28P-201ENST00000364739 NMIQ13287 307 aaPredicted RBP7.53□□□□□ -1.2
RNU4-28P-201ENST00000364739 FYB2Q5VWT5 728 aa7.53□□□□□ -1.2
RNU4-28P-201ENST00000364739 INTS3Q68E01 1043 aaKnown RBP7.53□□□□□ -1.2
RNU4-28P-201ENST00000364739 UNC5AQ6ZN44 842 aa7.53□□□□□ -1.2
RNU4-28P-201ENST00000364739 TMPRSS7Q7RTY8 843 aa7.53□□□□□ -1.2
RNU4-28P-201ENST00000364739 CRBNQ96SW2 442 aa7.53□□□□□ -1.2
RNU4-28P-201ENST00000364739 MKRN2Q9H000 416 aaKnown RBP7.53□□□□□ -1.2
RNU4-28P-201ENST00000364739 CTNND2Q9UQB3 1225 aa7.53□□□□□ -1.2
RNU4-28P-201ENST00000364739 MEIS1O00470 390 aa7.52□□□□□ -1.21
RNU4-28P-201ENST00000364739 TP53P04637 393 aaPredicted RBP7.52□□□□□ -1.21
RNU4-28P-201ENST00000364739 JUNBP17275 347 aaPredicted RBP7.52□□□□□ -1.21
RNU4-28P-201ENST00000364739 LTKP29376 864 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms