RNA–Protein interactions for RNA: ENST00000361917.5

COL11A2-202, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-202ENST00000361917 PAK2Q13177 524 aa16.44■□□□□ 0.22
COL11A2-202ENST00000361917 EDC3Q96F86 508 aaKnown RBP16.44■□□□□ 0.22
COL11A2-202ENST00000361917 CARD10Q9BWT7 1032 aa16.44■□□□□ 0.22
COL11A2-202ENST00000361917 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.44■□□□□ 0.22
COL11A2-202ENST00000361917 USP40Q9NVE5 1235 aa16.44■□□□□ 0.22
COL11A2-202ENST00000361917 DDX17Q92841 729 aaKnown RBP16.44■□□□□ 0.22
COL11A2-202ENST00000361917 CDCA7Q9BWT1 371 aaPredicted RBP16.44■□□□□ 0.22
COL11A2-202ENST00000361917 SPOUT1Q5T280 376 aaKnown RBP16.44■□□□□ 0.22
COL11A2-202ENST00000361917 SND1Q7KZF4 910 aaKnown RBP eCLIP16.44■□□□□ 0.22
COL11A2-202ENST00000361917 GDAP1L1Q96MZ0 367 aa16.44■□□□□ 0.22
COL11A2-202ENST00000361917 IFIH1Q9BYX4 1025 aaKnown RBP16.44■□□□□ 0.22
COL11A2-202ENST00000361917 TRIM35Q9UPQ4 493 aa16.44■□□□□ 0.22
COL11A2-202ENST00000361917 C2CD5Q86YS7 1000 aa16.44■□□□□ 0.22
COL11A2-202ENST00000361917 ORAI2Q96SN7 254 aa16.44■□□□□ 0.22
COL11A2-202ENST00000361917 ARHGAP6O43182 974 aa16.44■□□□□ 0.22
COL11A2-202ENST00000361917 INPP5BP32019 993 aa16.44■□□□□ 0.22
COL11A2-202ENST00000361917 RUFY4Q6ZNE9 571 aa16.44■□□□□ 0.22
COL11A2-202ENST00000361917 MIER3Q7Z3K6 550 aa16.43■□□□□ 0.22
COL11A2-202ENST00000361917 METTL13Q8N6R0 699 aa16.43■□□□□ 0.22
COL11A2-202ENST00000361917 PPP1R12CQ9BZL4 782 aa16.43■□□□□ 0.22
COL11A2-202ENST00000361917 BABAM1Q9NWV8 329 aa16.43■□□□□ 0.22
COL11A2-202ENST00000361917 PTPROQ16827 1216 aa16.43■□□□□ 0.22
COL11A2-202ENST00000361917 GPBP1Q86WP2 473 aa16.43■□□□□ 0.22
COL11A2-202ENST00000361917 SMAP1Q8IYB5 467 aaPredicted RBP16.43■□□□□ 0.22
COL11A2-202ENST00000361917 GAS7O60861 476 aa16.43■□□□□ 0.22
COL11A2-202ENST00000361917 ABCB4P21439 1286 aa16.43■□□□□ 0.22
COL11A2-202ENST00000361917 TECP42680 631 aa16.43■□□□□ 0.22
COL11A2-202ENST00000361917 ANKRD42Q8N9B4 389 aa16.43■□□□□ 0.22
COL11A2-202ENST00000361917 IRX3P78415 501 aaPredicted RBP16.43■□□□□ 0.22
COL11A2-202ENST00000361917 SATB1Q01826 763 aa16.43■□□□□ 0.22
COL11A2-202ENST00000361917 ME3Q16798 604 aa16.43■□□□□ 0.22
COL11A2-202ENST00000361917 TESPA1A2RU30 521 aaPredicted RBP16.42■□□□□ 0.22
COL11A2-202ENST00000361917 HOXB7P09629 217 aa16.42■□□□□ 0.22
COL11A2-202ENST00000361917 DENND2CQ68D51 928 aa16.42■□□□□ 0.22
COL11A2-202ENST00000361917 RIOK1Q9BRS2 568 aaKnown RBP16.42■□□□□ 0.22
COL11A2-202ENST00000361917 MED10Q9BTT4 135 aa16.42■□□□□ 0.22
COL11A2-202ENST00000361917 VCX3BQ9H321 246 aa16.42■□□□□ 0.22
COL11A2-202ENST00000361917 ST7Q9NRC1 585 aa16.42■□□□□ 0.22
COL11A2-202ENST00000361917 CHL1O00533 1208 aa16.42■□□□□ 0.22
COL11A2-202ENST00000361917 GTF2IP78347 998 aa16.42■□□□□ 0.22
COL11A2-202ENST00000361917 DLGAP5Q15398 846 aa16.42■□□□□ 0.22
COL11A2-202ENST00000361917 SUPT20HQ8NEM7 779 aa16.42■□□□□ 0.22
COL11A2-202ENST00000361917 GLG1Q92896 1179 aa16.42■□□□□ 0.22
COL11A2-202ENST00000361917 XPO4Q9C0E2 1151 aaKnown RBP16.42■□□□□ 0.22
COL11A2-202ENST00000361917 PLCB1Q9NQ66 1216 aa16.42■□□□□ 0.22
COL11A2-202ENST00000361917 GUCY2FP51841 1108 aa16.42■□□□□ 0.22
COL11A2-202ENST00000361917 NIM1KQ8IY84 436 aa16.42■□□□□ 0.22
COL11A2-202ENST00000361917 TSKSQ9UJT2 592 aa16.42■□□□□ 0.22
COL11A2-202ENST00000361917 EDC4Q6P2E9 1401 aaKnown RBP16.42■□□□□ 0.22
COL11A2-202ENST00000361917 CUL4BQ13620 913 aa16.42■□□□□ 0.22
COL11A2-202ENST00000361917 PPP2R5BQ15173 497 aa16.42■□□□□ 0.22
COL11A2-202ENST00000361917 LGSNQ5TDP6 509 aa16.42■□□□□ 0.22
COL11A2-202ENST00000361917 ARHGEF16Q5VV41 709 aa16.42■□□□□ 0.22
COL11A2-202ENST00000361917 DEPTORQ8TB45 409 aa16.42■□□□□ 0.22
COL11A2-202ENST00000361917 DSCC1Q9BVC3 393 aa16.42■□□□□ 0.22
COL11A2-202ENST00000361917 ARPP21Q9UBL0 812 aaPredicted RBP16.42■□□□□ 0.22
COL11A2-202ENST00000361917 OAS2P29728 719 aaKnown RBP16.42■□□□□ 0.22
COL11A2-202ENST00000361917 NLRX1Q86UT6 975 aa16.42■□□□□ 0.22
COL11A2-202ENST00000361917 KCNJ18B7U540 433 aa16.41■□□□□ 0.22
COL11A2-202ENST00000361917 KCNJ12Q14500 433 aa16.41■□□□□ 0.22
COL11A2-202ENST00000361917 ZNF654Q8IZM8 581 aa16.41■□□□□ 0.22
COL11A2-202ENST00000361917 ZMYM3Q14202 1370 aa16.41■□□□□ 0.22
COL11A2-202ENST00000361917 TTC36A6NLP5 189 aa16.41■□□□□ 0.22
COL11A2-202ENST00000361917 SARNPP82979 210 aaKnown RBP16.41■□□□□ 0.22
COL11A2-202ENST00000361917 TMCO4Q5TGY1 634 aa16.41■□□□□ 0.22
COL11A2-202ENST00000361917 OTUD6AQ7L8S5 288 aa16.41■□□□□ 0.22
COL11A2-202ENST00000361917 SRGAP1Q7Z6B7 1085 aa16.41■□□□□ 0.22
COL11A2-202ENST00000361917 LMNTD2Q8IXW0 634 aa16.41■□□□□ 0.22
COL11A2-202ENST00000361917 HOOK2Q96ED9 719 aa16.41■□□□□ 0.22
COL11A2-202ENST00000361917 PAGR1Q9BTK6 254 aa16.41■□□□□ 0.22
COL11A2-202ENST00000361917 YARSP54577 528 aaKnown RBP16.41■□□□□ 0.22
COL11A2-202ENST00000361917 GSDMBQ8TAX9 411 aa16.41■□□□□ 0.22
COL11A2-202ENST00000361917 RSAD2Q8WXG1 361 aa16.41■□□□□ 0.22
COL11A2-202ENST00000361917 NUF2Q9BZD4 464 aa16.41■□□□□ 0.22
COL11A2-202ENST00000361917 CTSWP56202 376 aa16.41■□□□□ 0.22
COL11A2-202ENST00000361917 PRR16Q569H4 304 aa16.41■□□□□ 0.22
COL11A2-202ENST00000361917 ZSCAN10Q96SZ4 725 aaPredicted RBP16.41■□□□□ 0.22
COL11A2-202ENST00000361917 AMFRQ9UKV5 643 aa16.41■□□□□ 0.22
COL11A2-202ENST00000361917 CASQ2O14958 399 aaPredicted RBP16.41■□□□□ 0.22
COL11A2-202ENST00000361917 PPIP5K2O43314 1243 aa16.41■□□□□ 0.22
COL11A2-202ENST00000361917 PFKFB1P16118 471 aa16.41■□□□□ 0.22
COL11A2-202ENST00000361917 MTMR3Q13615 1198 aa16.41■□□□□ 0.22
COL11A2-202ENST00000361917 KRT81Q14533 505 aa16.41■□□□□ 0.22
COL11A2-202ENST00000361917 EAPPQ56P03 285 aaPredicted RBP16.41■□□□□ 0.22
COL11A2-202ENST00000361917 RILPQ96NA2 401 aa16.41■□□□□ 0.22
COL11A2-202ENST00000361917 NT5C3AQ9H0P0 336 aa16.41■□□□□ 0.22
COL11A2-202ENST00000361917 MORC3Q14149 939 aa16.4■□□□□ 0.22
COL11A2-202ENST00000361917 KMT5BQ4FZB7 885 aa16.4■□□□□ 0.22
COL11A2-202ENST00000361917 SCYL2Q6P3W7 929 aa16.4■□□□□ 0.22
COL11A2-202ENST00000361917 MIPOL1Q8TD10 442 aa16.4■□□□□ 0.22
COL11A2-202ENST00000361917 LMBRD1Q9NUN5 540 aa16.4■□□□□ 0.22
COL11A2-202ENST00000361917 KDM3AQ9Y4C1 1321 aa16.4■□□□□ 0.22
COL11A2-202ENST00000361917 NEURL1BA8MQ27 555 aa16.4■□□□□ 0.22
COL11A2-202ENST00000361917 TXNDC9O14530 226 aa16.4■□□□□ 0.22
COL11A2-202ENST00000361917 P4HA1P13674 534 aa16.4■□□□□ 0.22
COL11A2-202ENST00000361917 CEP120Q8N960 986 aa16.4■□□□□ 0.22
COL11A2-202ENST00000361917 ZMYM4Q5VZL5 1548 aa16.4■□□□□ 0.22
COL11A2-202ENST00000361917 SLC12A2P55011 1212 aa16.4■□□□□ 0.22
COL11A2-202ENST00000361917 PNMA8AQ86V59 439 aaPredicted RBP16.4■□□□□ 0.22
COL11A2-202ENST00000361917 BUB1O43683 1085 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms