RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 GSPT2Q8IYD1 628 aaKnown RBP10.16□□□□□ -0.78
CALD1-201ENST00000361675 PNKPQ96T60 521 aa10.16□□□□□ -0.78
CALD1-201ENST00000361675 AASDHPPTQ9NRN7 309 aa10.16□□□□□ -0.78
CALD1-201ENST00000361675 POTEB2H3BUK9 544 aa10.16□□□□□ -0.78
CALD1-201ENST00000361675 IRAK1P51617 712 aa10.16□□□□□ -0.78
CALD1-201ENST00000361675 ZBED6P86452 979 aa10.16□□□□□ -0.78
CALD1-201ENST00000361675 SEPT14Q6ZU15 432 aa10.16□□□□□ -0.78
CALD1-201ENST00000361675 EZH1Q92800 747 aaPredicted RBP10.16□□□□□ -0.78
CALD1-201ENST00000361675 MKL1Q969V6 931 aa10.16□□□□□ -0.78
CALD1-201ENST00000361675 JAKMIP1Q96N16 626 aaKnown RBP10.16□□□□□ -0.78
CALD1-201ENST00000361675 B3GALNT1O75752 331 aa10.15□□□□□ -0.78
CALD1-201ENST00000361675 VIMP08670 466 aaKnown RBP10.15□□□□□ -0.78
CALD1-201ENST00000361675 CLTAP09496 248 aa10.15□□□□□ -0.78
CALD1-201ENST00000361675 SMARCA1P28370 1054 aa10.15□□□□□ -0.78
CALD1-201ENST00000361675 HSPA2P54652 639 aa10.15□□□□□ -0.78
CALD1-201ENST00000361675 EVA1CP58658 441 aa10.15□□□□□ -0.78
CALD1-201ENST00000361675 CCDC178Q5BJE1 867 aa10.15□□□□□ -0.78
CALD1-201ENST00000361675 ZNF530Q6P9A1 599 aaPredicted RBP10.15□□□□□ -0.78
CALD1-201ENST00000361675 SMARCC2Q8TAQ2 1214 aa10.15□□□□□ -0.78
CALD1-201ENST00000361675 AS3MTQ9HBK9 375 aa10.15□□□□□ -0.78
CALD1-201ENST00000361675 MATR3P43243 847 aaKnown RBP eCLIP10.15□□□□□ -0.78
CALD1-201ENST00000361675 UBASH3AP57075 661 aa10.15□□□□□ -0.78
CALD1-201ENST00000361675 BEND6Q5SZJ8 279 aaPredicted RBP10.15□□□□□ -0.78
CALD1-201ENST00000361675 CCAR1Q8IX12 1150 aaKnown RBP10.15□□□□□ -0.78
CALD1-201ENST00000361675 CCDC148Q8NFR7 591 aa10.15□□□□□ -0.78
CALD1-201ENST00000361675 NSMCE1Q8WV22 266 aa10.15□□□□□ -0.78
CALD1-201ENST00000361675 TCP11Q8WWU5 503 aa10.15□□□□□ -0.78
CALD1-201ENST00000361675 CAPZA3Q96KX2 299 aa10.15□□□□□ -0.78
CALD1-201ENST00000361675 RETREG1Q9H6L5 497 aa10.15□□□□□ -0.78
CALD1-201ENST00000361675 PPP2R2CQ9Y2T4 447 aa10.15□□□□□ -0.78
CALD1-201ENST00000361675 NPHP3Q7Z494 1330 aa10.15□□□□□ -0.78
CALD1-201ENST00000361675 SGSM2O43147 1006 aa10.15□□□□□ -0.79
CALD1-201ENST00000361675 PARP9Q8IXQ6 854 aa10.15□□□□□ -0.79
CALD1-201ENST00000361675 SLC39A3Q9BRY0 314 aa10.15□□□□□ -0.79
CALD1-201ENST00000361675 ESYT1Q9BSJ8 1104 aa10.15□□□□□ -0.79
CALD1-201ENST00000361675 PPCSQ9HAB8 311 aa10.15□□□□□ -0.79
CALD1-201ENST00000361675 TBC1D7Q9P0N9 293 aa10.15□□□□□ -0.79
CALD1-201ENST00000361675 MTMR6Q9Y217 621 aa10.15□□□□□ -0.79
CALD1-201ENST00000361675 RGPD5Q99666 1765 aa10.15□□□□□ -0.79
CALD1-201ENST00000361675 LRRIQ3A6PVS8 624 aaPredicted RBP10.14□□□□□ -0.79
CALD1-201ENST00000361675 BOLA2-SMG1P6H3BVE0 249 aa10.14□□□□□ -0.79
CALD1-201ENST00000361675 TCF3P15923 654 aa10.14□□□□□ -0.79
CALD1-201ENST00000361675 MXRA7P84157 204 aa10.14□□□□□ -0.79
CALD1-201ENST00000361675 PPP1R7Q15435 360 aa10.14□□□□□ -0.79
CALD1-201ENST00000361675 SLC43A3Q8NBI5 491 aa10.14□□□□□ -0.79
CALD1-201ENST00000361675 TMEM87AQ8NBN3 555 aa10.14□□□□□ -0.79
CALD1-201ENST00000361675 RBM46Q8TBY0 533 aaKnown RBP10.14□□□□□ -0.79
CALD1-201ENST00000361675 WHAMMQ8TF30 809 aa10.14□□□□□ -0.79
CALD1-201ENST00000361675 SLC40A1Q9NP59 571 aa10.14□□□□□ -0.79
CALD1-201ENST00000361675 EXOC1Q9NV70 894 aa10.14□□□□□ -0.79
CALD1-201ENST00000361675 HAUS2Q9NVX0 235 aa10.14□□□□□ -0.79
CALD1-201ENST00000361675 BLOC1S6Q9UL45 172 aa10.14□□□□□ -0.79
CALD1-201ENST00000361675 ANKRD18BA2A2Z9 1011 aa10.14□□□□□ -0.79
CALD1-201ENST00000361675 GNAT1P11488 350 aa10.14□□□□□ -0.79
CALD1-201ENST00000361675 GGCXP38435 758 aa10.14□□□□□ -0.79
CALD1-201ENST00000361675 SKIV2LQ15477 1246 aaKnown RBP10.14□□□□□ -0.79
CALD1-201ENST00000361675 SOGA3Q5TF21 947 aa10.14□□□□□ -0.79
CALD1-201ENST00000361675 SPAG5Q96R06 1193 aa10.14□□□□□ -0.79
CALD1-201ENST00000361675 SPG7Q9UQ90 795 aa10.14□□□□□ -0.79
CALD1-201ENST00000361675 TRIM21P19474 475 aaKnown RBP10.14□□□□□ -0.79
CALD1-201ENST00000361675 CCT4P50991 539 aaKnown RBP10.14□□□□□ -0.79
CALD1-201ENST00000361675 GRIK3Q13003 919 aa10.14□□□□□ -0.79
CALD1-201ENST00000361675 CFAP58Q5T655 872 aa10.14□□□□□ -0.79
CALD1-201ENST00000361675 UNC5CLQ8IV45 518 aa10.14□□□□□ -0.79
CALD1-201ENST00000361675 CACTIN-AS1Q8N1I8 211 aa10.14□□□□□ -0.79
CALD1-201ENST00000361675 PPANQ9NQ55 473 aaKnown RBP10.14□□□□□ -0.79
CALD1-201ENST00000361675 C1orf167Q5SNV9 1468 aa10.14□□□□□ -0.79
CALD1-201ENST00000361675 MEFVO15553 781 aaPredicted RBP10.13□□□□□ -0.79
CALD1-201ENST00000361675 TUBB4AP04350 444 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 GNAI2P04899 355 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 LDHCP07864 332 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 GNAT2P19087 354 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 CDC25BP30305 580 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 PRPHP41219 470 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 AGAP9Q5VTM2 703 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 KANK3Q6NY19 840 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 SRGAP1Q7Z6B7 1085 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 LMCD1Q9NZU5 365 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 EVLQ9UI08 416 aaPredicted RBP10.13□□□□□ -0.79
CALD1-201ENST00000361675 TCHHQ07283 1943 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 BTBD11A6QL63 1104 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 ATP6V1G1O75348 118 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 RPS6KA5O75582 802 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 SLC8A1P32418 973 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 CHRNA2Q15822 529 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 HIBCHQ6NVY1 386 aaPredicted RBP10.13□□□□□ -0.79
CALD1-201ENST00000361675 STAG2Q8N3U4 1231 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 DCLK2Q8N568 766 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 FSIP1Q8NA03 581 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 IL17RAQ96F46 866 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 UBXN6Q9BZV1 441 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 IL25Q9H293 177 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 TAOK3Q9H2K8 898 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 C6orf203Q9P0P8 240 aaPredicted RBP10.13□□□□□ -0.79
CALD1-201ENST00000361675 STRCP1A6NGW2 1772 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 PI4KAP2A4QPH2 592 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 HPDP32754 393 aaPredicted RBP10.13□□□□□ -0.79
CALD1-201ENST00000361675 RAB27AP51159 221 aa10.13□□□□□ -0.79
CALD1-201ENST00000361675 ADKP55263 362 aaKnown RBP10.13□□□□□ -0.79
CALD1-201ENST00000361675 MCCD1P59942 119 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms