RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 RNF20Q5VTR2 975 aa7.57□□□□□ -1.2
SUDS3-201ENST00000360286 RCSD1Q6JBY9 416 aa7.57□□□□□ -1.2
SUDS3-201ENST00000360286 ANKRD23Q86SG2 305 aa7.57□□□□□ -1.2
SUDS3-201ENST00000360286 MB21D2Q8IYB1 491 aaPredicted RBP7.57□□□□□ -1.2
SUDS3-201ENST00000360286 SPICE1Q8N0Z3 855 aa7.57□□□□□ -1.2
SUDS3-201ENST00000360286 LRRC47Q8N1G4 583 aaKnown RBP7.57□□□□□ -1.2
SUDS3-201ENST00000360286 TMEM47Q9BQJ4 181 aa7.57□□□□□ -1.2
SUDS3-201ENST00000360286 KIAA1683Q9H0B3 1180 aa7.57□□□□□ -1.2
SUDS3-201ENST00000360286 CNNM2Q9H8M5 875 aa7.57□□□□□ -1.2
SUDS3-201ENST00000360286 SENP2Q9HC62 589 aa7.57□□□□□ -1.2
SUDS3-201ENST00000360286 STX8Q9UNK0 236 aa7.57□□□□□ -1.2
SUDS3-201ENST00000360286 MTMR7Q9Y216 660 aa7.57□□□□□ -1.2
SUDS3-201ENST00000360286 HSPA1AP0DMV8 641 aaKnown RBP7.56□□□□□ -1.2
SUDS3-201ENST00000360286 HSPA1BP0DMV9 641 aaKnown RBP7.56□□□□□ -1.2
SUDS3-201ENST00000360286 CYP2C8P10632 490 aa7.56□□□□□ -1.2
SUDS3-201ENST00000360286 ZKSCAN1P17029 563 aaPredicted RBP7.56□□□□□ -1.2
SUDS3-201ENST00000360286 USP14P54578 494 aa7.56□□□□□ -1.2
SUDS3-201ENST00000360286 SEC23AQ15436 765 aa7.56□□□□□ -1.2
SUDS3-201ENST00000360286 OTUD7BQ6GQQ9 843 aa7.56□□□□□ -1.2
SUDS3-201ENST00000360286 CATSPERGQ6ZRH7 1159 aa7.56□□□□□ -1.2
SUDS3-201ENST00000360286 RASGRP2Q7LDG7 609 aa7.56□□□□□ -1.2
SUDS3-201ENST00000360286 RALYLQ86SE5 291 aaKnown RBP7.56□□□□□ -1.2
SUDS3-201ENST00000360286 PROCA1Q8NCQ7 364 aaPredicted RBP7.56□□□□□ -1.2
SUDS3-201ENST00000360286 IGDCC4Q8TDY8 1250 aa7.56□□□□□ -1.2
SUDS3-201ENST00000360286 C12orf42Q96LP6 360 aa7.56□□□□□ -1.2
SUDS3-201ENST00000360286 TTC14Q96N46 770 aa7.56□□□□□ -1.2
SUDS3-201ENST00000360286 NEK1Q96PY6 1258 aa7.56□□□□□ -1.2
SUDS3-201ENST00000360286 ZSCAN10Q96SZ4 725 aaPredicted RBP7.56□□□□□ -1.2
SUDS3-201ENST00000360286 NUP88Q99567 741 aaPredicted RBP7.56□□□□□ -1.2
SUDS3-201ENST00000360286 P2RX7Q99572 595 aaKnown RBP7.56□□□□□ -1.2
SUDS3-201ENST00000360286 LRRC2Q9BYS8 371 aa7.56□□□□□ -1.2
SUDS3-201ENST00000360286 RPAP3Q9H6T3 665 aaPredicted RBP7.56□□□□□ -1.2
SUDS3-201ENST00000360286 VCPKMTQ9H867 229 aa7.56□□□□□ -1.2
SUDS3-201ENST00000360286 GPHNQ9NQX3 736 aaPredicted RBP7.56□□□□□ -1.2
SUDS3-201ENST00000360286 AGTPBP1Q9UPW5 1226 aa7.56□□□□□ -1.2
SUDS3-201ENST00000360286 PLIN4Q96Q06 1357 aa7.56□□□□□ -1.2
SUDS3-201ENST00000360286 TNKSO95271 1327 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 USP17L15C9J2P7 530 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 USP17L13C9JLJ4 530 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 USP17L11C9JVI0 530 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 USP17L18D6R9N7 530 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 USP17L22D6RA61 530 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 USP17L17D6RBQ6 530 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 USP17L19D6RCP7 530 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 USP17L20D6RJB6 530 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 IFIT3O14879 490 aaKnown RBP7.55□□□□□ -1.2
SUDS3-201ENST00000360286 FOXN1O15353 648 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 EPB41L2O43491 1005 aaKnown RBP7.55□□□□□ -1.2
SUDS3-201ENST00000360286 CA12O43570 354 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 PRC1O43663 620 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 PEX10O60683 326 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 EIF5BO60841 1220 aaKnown RBP7.55□□□□□ -1.2
SUDS3-201ENST00000360286 NDUFB10O96000 172 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 ALDH1A1P00352 501 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 TOP1P11387 765 aaKnown RBP7.55□□□□□ -1.2
SUDS3-201ENST00000360286 VCAM1P19320 739 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 OSBPP22059 807 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 MCCP23508 829 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 HOXA7P31268 230 aaPredicted RBP7.55□□□□□ -1.2
SUDS3-201ENST00000360286 MCM5P33992 734 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 EXOSC10Q01780 885 aaKnown RBP7.55□□□□□ -1.2
SUDS3-201ENST00000360286 USP17L24Q0WX57 530 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 CRHR2Q13324 411 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 TAF1CQ15572 869 aaPredicted RBP7.55□□□□□ -1.2
SUDS3-201ENST00000360286 CCDC178Q5BJE1 867 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 FAM83BQ5T0W9 1011 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 SLFN13Q68D06 897 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 POTEEQ6S8J3 1075 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 IQCA1Q86XH1 822 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 DGKHQ86XP1 1220 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 PIAS4Q8N2W9 510 aaPredicted RBP7.55□□□□□ -1.2
SUDS3-201ENST00000360286 ENAHQ8N8S7 591 aaPredicted RBP7.55□□□□□ -1.2
SUDS3-201ENST00000360286 ANKS1AQ92625 1134 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 TCEANC2Q96MN5 208 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 JAKMIP1Q96N16 626 aaKnown RBP7.55□□□□□ -1.2
SUDS3-201ENST00000360286 UBAC1Q9BSL1 405 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 BEGAINQ9BUH8 593 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 ASCC2Q9H1I8 757 aaPredicted RBP7.55□□□□□ -1.2
SUDS3-201ENST00000360286 SH2D4AQ9H788 454 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 ZFYVE28Q9HCC9 887 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 GOPCQ9HD26 462 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 THSD7BQ9C0I4 1608 aa7.55□□□□□ -1.2
SUDS3-201ENST00000360286 LOC285556D6RIA3 1793 aa7.54□□□□□ -1.2
SUDS3-201ENST00000360286 SH2B2O14492 632 aaPredicted RBP7.54□□□□□ -1.2
SUDS3-201ENST00000360286 ECM2O94769 699 aaPredicted RBP7.54□□□□□ -1.2
SUDS3-201ENST00000360286 BMP3P12645 472 aa7.54□□□□□ -1.2
SUDS3-201ENST00000360286 NT5C2P49902 561 aa7.54□□□□□ -1.2
SUDS3-201ENST00000360286 PABPC4Q13310 644 aaKnown RBP eCLIP7.54□□□□□ -1.2
SUDS3-201ENST00000360286 KRT32Q14532 448 aa7.54□□□□□ -1.2
SUDS3-201ENST00000360286 WTAPQ15007 396 aa7.54□□□□□ -1.2
SUDS3-201ENST00000360286 TMEM67Q5HYA8 995 aa7.54□□□□□ -1.2
SUDS3-201ENST00000360286 PPP4R3BQ5MIZ7 849 aa7.54□□□□□ -1.2
SUDS3-201ENST00000360286 IFIT1BQ5T764 474 aaKnown RBP7.54□□□□□ -1.2
SUDS3-201ENST00000360286 TTBK2Q6IQ55 1244 aa7.54□□□□□ -1.2
SUDS3-201ENST00000360286 SAMD1Q6SPF0 538 aaPredicted RBP7.54□□□□□ -1.2
SUDS3-201ENST00000360286 DHX32Q7L7V1 743 aaKnown RBP7.54□□□□□ -1.2
SUDS3-201ENST00000360286 GMCL1P1Q8NEA9 526 aa7.54□□□□□ -1.2
SUDS3-201ENST00000360286 TANGO6Q9C0B7 1094 aa7.54□□□□□ -1.2
SUDS3-201ENST00000360286 KAT14Q9H8E8 782 aa7.54□□□□□ -1.2
SUDS3-201ENST00000360286 LY9Q9HBG7 655 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms