RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 HACL1Q9UJ83 578 aa16.01■□□□□ 0.15
CSNK1E-201ENST00000359867 MYH15Q9Y2K3 1946 aa16.01■□□□□ 0.15
CSNK1E-201ENST00000359867 ZC3H4Q9UPT8 1303 aaKnown RBP16.01■□□□□ 0.15
CSNK1E-201ENST00000359867 CNTNAP1P78357 1384 aa16.01■□□□□ 0.15
CSNK1E-201ENST00000359867 CCDC196A0A1B0GTZ2 297 aa16■□□□□ 0.15
CSNK1E-201ENST00000359867 FAM196BA6NMK8 535 aa16■□□□□ 0.15
CSNK1E-201ENST00000359867 DCAF8L1A6NGE4 600 aa16■□□□□ 0.15
CSNK1E-201ENST00000359867 ORC4O43929 436 aa16■□□□□ 0.15
CSNK1E-201ENST00000359867 IFNAR1P17181 557 aa16■□□□□ 0.15
CSNK1E-201ENST00000359867 GUCY1B3Q02153 619 aa16■□□□□ 0.15
CSNK1E-201ENST00000359867 SEC23AQ15436 765 aa16■□□□□ 0.15
CSNK1E-201ENST00000359867 ANGEL2Q5VTE6 544 aaKnown RBP16■□□□□ 0.15
CSNK1E-201ENST00000359867 PPFIA3O75145 1194 aa15.99■□□□□ 0.15
CSNK1E-201ENST00000359867 MTERF4Q7Z6M4 381 aaKnown RBP15.99■□□□□ 0.15
CSNK1E-201ENST00000359867 WASF1Q92558 559 aa15.99■□□□□ 0.15
CSNK1E-201ENST00000359867 ALG1Q9BT22 464 aa15.99■□□□□ 0.15
CSNK1E-201ENST00000359867 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.99■□□□□ 0.15
CSNK1E-201ENST00000359867 MMP14P50281 582 aa15.99■□□□□ 0.15
CSNK1E-201ENST00000359867 SSRP1Q08945 709 aaKnown RBP15.99■□□□□ 0.15
CSNK1E-201ENST00000359867 L3MBTL3Q96JM7 780 aaPredicted RBP15.99■□□□□ 0.15
CSNK1E-201ENST00000359867 ZSCAN10Q96SZ4 725 aaPredicted RBP15.99■□□□□ 0.15
CSNK1E-201ENST00000359867 ZKSCAN3Q9BRR0 538 aa15.99■□□□□ 0.15
CSNK1E-201ENST00000359867 ADARB2Q9NS39 739 aaKnown RBP15.99■□□□□ 0.15
CSNK1E-201ENST00000359867 GGA3Q9NZ52 723 aa15.99■□□□□ 0.15
CSNK1E-201ENST00000359867 SIPA1L1O43166 1804 aa15.99■□□□□ 0.15
CSNK1E-201ENST00000359867 DYNC1I1O14576 645 aa15.98■□□□□ 0.15
CSNK1E-201ENST00000359867 ENTPD3O75355 529 aa15.98■□□□□ 0.15
CSNK1E-201ENST00000359867 FMNL1O95466 1100 aaPredicted RBP15.98■□□□□ 0.15
CSNK1E-201ENST00000359867 RXRAP19793 462 aa15.98■□□□□ 0.15
CSNK1E-201ENST00000359867 CBX1P83916 185 aa15.98■□□□□ 0.15
CSNK1E-201ENST00000359867 RTN1Q16799 776 aa15.98■□□□□ 0.15
CSNK1E-201ENST00000359867 IQCA1Q86XH1 822 aa15.98■□□□□ 0.15
CSNK1E-201ENST00000359867 DDX19AQ9NUU7 478 aaKnown RBP15.98■□□□□ 0.15
CSNK1E-201ENST00000359867 RANBP6O60518 1105 aaKnown RBP15.98■□□□□ 0.15
CSNK1E-201ENST00000359867 RASA3Q14644 834 aa15.98■□□□□ 0.15
CSNK1E-201ENST00000359867 FAM47AQ5JRC9 791 aa15.98■□□□□ 0.15
CSNK1E-201ENST00000359867 ZNF654Q8IZM8 581 aa15.98■□□□□ 0.15
CSNK1E-201ENST00000359867 PGBD1Q96JS3 809 aa15.98■□□□□ 0.15
CSNK1E-201ENST00000359867 CSRNP1Q96S65 589 aa15.98■□□□□ 0.15
CSNK1E-201ENST00000359867 RTEL1Q9NZ71 1219 aa15.98■□□□□ 0.15
CSNK1E-201ENST00000359867 TNKSO95271 1327 aa15.98■□□□□ 0.15
CSNK1E-201ENST00000359867 ROBO3Q96MS0 1386 aa15.98■□□□□ 0.15
CSNK1E-201ENST00000359867 POTECB2RU33 542 aa15.98■□□□□ 0.15
CSNK1E-201ENST00000359867 FAM151AQ8WW52 585 aa15.98■□□□□ 0.15
CSNK1E-201ENST00000359867 USP28Q96RU2 1077 aa15.98■□□□□ 0.15
CSNK1E-201ENST00000359867 MYL10Q9BUA6 226 aa15.98■□□□□ 0.15
CSNK1E-201ENST00000359867 NPM3O75607 178 aaKnown RBP15.97■□□□□ 0.15
CSNK1E-201ENST00000359867 HLA-DOAP06340 250 aa15.97■□□□□ 0.15
CSNK1E-201ENST00000359867 CDK8P49336 464 aa15.97■□□□□ 0.15
CSNK1E-201ENST00000359867 PDE4BQ07343 736 aa15.97■□□□□ 0.15
CSNK1E-201ENST00000359867 FANCBQ8NB91 859 aa15.97■□□□□ 0.15
CSNK1E-201ENST00000359867 DNAJC18Q9H819 358 aa15.97■□□□□ 0.15
CSNK1E-201ENST00000359867 MKNK2Q9HBH9 465 aa15.97■□□□□ 0.15
CSNK1E-201ENST00000359867 SERPINB13Q9UIV8 391 aa15.97■□□□□ 0.15
CSNK1E-201ENST00000359867 POLR2AP24928 1970 aaKnown RBP15.97■□□□□ 0.15
CSNK1E-201ENST00000359867 LIG1P18858 919 aa15.97■□□□□ 0.15
CSNK1E-201ENST00000359867 EPHX2P34913 555 aa15.97■□□□□ 0.15
CSNK1E-201ENST00000359867 KIF23Q02241 960 aaPredicted RBP15.97■□□□□ 0.15
CSNK1E-201ENST00000359867 PRAMEF18Q5VWM3 479 aa15.97■□□□□ 0.15
CSNK1E-201ENST00000359867 OTUD7BQ6GQQ9 843 aa15.97■□□□□ 0.15
CSNK1E-201ENST00000359867 C16orf86Q6ZW13 317 aa15.97■□□□□ 0.15
CSNK1E-201ENST00000359867 CCDC144CPQ8IYA2 1237 aa15.97■□□□□ 0.15
CSNK1E-201ENST00000359867 TRIM22Q8IYM9 498 aa15.97■□□□□ 0.15
CSNK1E-201ENST00000359867 ZNF526Q8TF50 670 aaPredicted RBP15.97■□□□□ 0.15
CSNK1E-201ENST00000359867 PHKBQ93100 1093 aa15.97■□□□□ 0.15
CSNK1E-201ENST00000359867 DHX36Q9H2U1 1008 aaKnown RBP15.97■□□□□ 0.15
CSNK1E-201ENST00000359867 ATRNL1Q5VV63 1379 aa15.96■□□□□ 0.15
CSNK1E-201ENST00000359867 AP5Z1O43299 807 aa15.96■□□□□ 0.15
CSNK1E-201ENST00000359867 KIF20AO95235 890 aa15.96■□□□□ 0.15
CSNK1E-201ENST00000359867 CALM1P0DP23 149 aa15.96■□□□□ 0.15
CSNK1E-201ENST00000359867 CALM2P0DP24 149 aa15.96■□□□□ 0.15
CSNK1E-201ENST00000359867 CALM3P0DP25 149 aa15.96■□□□□ 0.15
CSNK1E-201ENST00000359867 GABPAQ06546 454 aa15.96■□□□□ 0.15
CSNK1E-201ENST00000359867 TRIM29Q14134 588 aa15.96■□□□□ 0.15
CSNK1E-201ENST00000359867 FKBP1CQ5VVH2 108 aa15.96■□□□□ 0.15
CSNK1E-201ENST00000359867 DLK2Q6UY11 383 aa15.96■□□□□ 0.15
CSNK1E-201ENST00000359867 CRACR2BQ8N4Y2 399 aaPredicted RBP15.96■□□□□ 0.15
CSNK1E-201ENST00000359867 ENAHQ8N8S7 591 aaPredicted RBP15.96■□□□□ 0.15
CSNK1E-201ENST00000359867 BICD2Q8TD16 824 aa15.96■□□□□ 0.15
CSNK1E-201ENST00000359867 NOLC1Q14978 699 aaKnown RBP eCLIP15.96■□□□□ 0.143e-6■■□□□ 12.8
CSNK1E-201ENST00000359867 EAPPQ56P03 285 aaPredicted RBP15.96■□□□□ 0.14
CSNK1E-201ENST00000359867 MYSM1Q5VVJ2 828 aa15.96■□□□□ 0.14
CSNK1E-201ENST00000359867 KRT40Q6A162 431 aa15.96■□□□□ 0.14
CSNK1E-201ENST00000359867 FAM83AQ86UY5 434 aa15.96■□□□□ 0.14
CSNK1E-201ENST00000359867 NUP62CLQ9H1M0 184 aa15.96■□□□□ 0.14
CSNK1E-201ENST00000359867 DEFB129Q9H1M3 183 aa15.96■□□□□ 0.14
CSNK1E-201ENST00000359867 POLR3EQ9NVU0 708 aa15.96■□□□□ 0.14
CSNK1E-201ENST00000359867 PI4KBQ9UBF8 816 aa15.96■□□□□ 0.14
CSNK1E-201ENST00000359867 YEATS4O95619 227 aa15.95■□□□□ 0.14
CSNK1E-201ENST00000359867 UVSSAQ2YD98 709 aa15.95■□□□□ 0.14
CSNK1E-201ENST00000359867 IFIT1BQ5T764 474 aaKnown RBP15.95■□□□□ 0.14
CSNK1E-201ENST00000359867 SPC24Q8NBT2 197 aa15.95■□□□□ 0.14
CSNK1E-201ENST00000359867 FUCA2Q9BTY2 467 aa15.95■□□□□ 0.14
CSNK1E-201ENST00000359867 SLC26A6Q9BXS9 759 aa15.95■□□□□ 0.14
CSNK1E-201ENST00000359867 NMT2O60551 498 aa15.95■□□□□ 0.14
CSNK1E-201ENST00000359867 RASA1P20936 1047 aa15.95■□□□□ 0.14
CSNK1E-201ENST00000359867 TNNI2P48788 182 aa15.95■□□□□ 0.14
CSNK1E-201ENST00000359867 MIGA2Q7L4E1 593 aa15.95■□□□□ 0.14
CSNK1E-201ENST00000359867 CATIPQ7Z7H3 387 aa15.95■□□□□ 0.14
CSNK1E-201ENST00000359867 TSPY2A6NKD2 308 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms