RNA–Protein interactions for RNA: ENST00000359597.8

TP53-202, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-202ENST00000359597 ANTXR2P58335 489 aa13.65□□□□□ -0.22
TP53-202ENST00000359597 PABPC4Q13310 644 aaKnown RBP eCLIP13.65□□□□□ -0.22
TP53-202ENST00000359597 SH3D19Q5HYK7 790 aa13.65□□□□□ -0.22
TP53-202ENST00000359597 CYP4F22Q6NT55 531 aa13.65□□□□□ -0.22
TP53-202ENST00000359597 SYNE3Q6ZMZ3 975 aa13.65□□□□□ -0.22
TP53-202ENST00000359597 NFXL1Q6ZNB6 911 aa13.65□□□□□ -0.22
TP53-202ENST00000359597 CHST3Q7LGC8 479 aa13.65□□□□□ -0.22
TP53-202ENST00000359597 PRRT2Q7Z6L0 340 aaPredicted RBP13.65□□□□□ -0.22
TP53-202ENST00000359597 GMCL1P1Q8NEA9 526 aa13.65□□□□□ -0.22
TP53-202ENST00000359597 ANKS1AQ92625 1134 aa13.65□□□□□ -0.22
TP53-202ENST00000359597 VCPKMTQ9H867 229 aa13.65□□□□□ -0.22
TP53-202ENST00000359597 LOC285556D6RIA3 1793 aa13.65□□□□□ -0.22
TP53-202ENST00000359597 CCL15-CCL14A0A0B4J2E2 113 aa13.64□□□□□ -0.23
TP53-202ENST00000359597 SH2B2O14492 632 aaPredicted RBP13.64□□□□□ -0.23
TP53-202ENST00000359597 RAD21O60216 631 aa13.64□□□□□ -0.23
TP53-202ENST00000359597 GJA5P36382 358 aa13.64□□□□□ -0.23
TP53-202ENST00000359597 MAP2K2P36507 400 aa13.64□□□□□ -0.23
TP53-202ENST00000359597 HMGCS2P54868 508 aa13.64□□□□□ -0.23
TP53-202ENST00000359597 EXOSC10Q01780 885 aaKnown RBP13.64□□□□□ -0.23
TP53-202ENST00000359597 MKRN3Q13064 507 aaKnown RBP13.64□□□□□ -0.23
TP53-202ENST00000359597 RABEP1Q15276 862 aa13.64□□□□□ -0.23
TP53-202ENST00000359597 ANKRD1Q15327 319 aa13.64□□□□□ -0.23
TP53-202ENST00000359597 SEC23AQ15436 765 aa13.64□□□□□ -0.23
TP53-202ENST00000359597 ZYXQ15942 572 aaKnown RBP13.64□□□□□ -0.23
TP53-202ENST00000359597 CCL15Q16663 113 aa13.64□□□□□ -0.23
TP53-202ENST00000359597 OTUD7BQ6GQQ9 843 aa13.64□□□□□ -0.23
TP53-202ENST00000359597 RCSD1Q6JBY9 416 aa13.64□□□□□ -0.23
TP53-202ENST00000359597 GADL1Q6ZQY3 521 aa13.64□□□□□ -0.23
TP53-202ENST00000359597 CATIPQ7Z7H3 387 aa13.64□□□□□ -0.23
TP53-202ENST00000359597 LRRC47Q8N1G4 583 aaKnown RBP13.64□□□□□ -0.23
TP53-202ENST00000359597 FBXL16Q8N461 479 aa13.64□□□□□ -0.23
TP53-202ENST00000359597 PNMA1Q8ND90 353 aa13.64□□□□□ -0.23
TP53-202ENST00000359597 ACER1Q8TDN7 264 aa13.64□□□□□ -0.23
TP53-202ENST00000359597 C12orf42Q96LP6 360 aa13.64□□□□□ -0.23
TP53-202ENST00000359597 TMEM47Q9BQJ4 181 aa13.64□□□□□ -0.23
TP53-202ENST00000359597 UPF3BQ9BZI7 483 aaKnown RBP13.64□□□□□ -0.23
TP53-202ENST00000359597 PDRG1Q9NUG6 133 aa13.64□□□□□ -0.23
TP53-202ENST00000359597 WDR33Q9C0J8 1336 aaKnown RBP13.64□□□□□ -0.23
TP53-202ENST00000359597 A0A1W2PRG0 241 aa13.63□□□□□ -0.23
TP53-202ENST00000359597 WDR46O15213 610 aaKnown RBP13.63□□□□□ -0.23
TP53-202ENST00000359597 DDAH1O94760 285 aa13.63□□□□□ -0.23
TP53-202ENST00000359597 CALM1P0DP23 149 aa13.63□□□□□ -0.23
TP53-202ENST00000359597 CALM2P0DP24 149 aa13.63□□□□□ -0.23
TP53-202ENST00000359597 CALM3P0DP25 149 aa13.63□□□□□ -0.23
TP53-202ENST00000359597 SIAH1Q8IUQ4 282 aa13.63□□□□□ -0.23
TP53-202ENST00000359597 IGDCC4Q8TDY8 1250 aa13.63□□□□□ -0.23
TP53-202ENST00000359597 LY9Q9HBG7 655 aa13.63□□□□□ -0.23
TP53-202ENST00000359597 ZCCHC17Q9NP64 241 aaKnown RBP13.63□□□□□ -0.23
TP53-202ENST00000359597 SLC12A7Q9Y666 1083 aa13.63□□□□□ -0.23
TP53-202ENST00000359597 THSD7BQ9C0I4 1608 aa13.62□□□□□ -0.23
TP53-202ENST00000359597 TESPA1A2RU30 521 aaPredicted RBP13.62□□□□□ -0.23
TP53-202ENST00000359597 F5H6K3 240 aa13.62□□□□□ -0.23
TP53-202ENST00000359597 ST18O60284 1047 aa13.62□□□□□ -0.23
TP53-202ENST00000359597 CPA1P15085 419 aa13.62□□□□□ -0.23
TP53-202ENST00000359597 SLC1A4P43007 532 aa13.62□□□□□ -0.23
TP53-202ENST00000359597 VEGFBP49765 207 aa13.62□□□□□ -0.23
TP53-202ENST00000359597 NEK4P51957 841 aa13.62□□□□□ -0.23
TP53-202ENST00000359597 RCAN1P53805 252 aa13.62□□□□□ -0.23
TP53-202ENST00000359597 KLRC3Q07444 240 aa13.62□□□□□ -0.23
TP53-202ENST00000359597 GPATCH4Q5T3I0 446 aaKnown RBP13.62□□□□□ -0.23
TP53-202ENST00000359597 Q6ZUG5 572 aa13.62□□□□□ -0.23
TP53-202ENST00000359597 SGMS1Q86VZ5 419 aa13.62□□□□□ -0.23
TP53-202ENST00000359597 NKX2-3Q8TAU0 364 aa13.62□□□□□ -0.23
TP53-202ENST00000359597 DCAF4Q8WV16 495 aa13.62□□□□□ -0.23
TP53-202ENST00000359597 GMCL1Q96IK5 515 aa13.62□□□□□ -0.23
TP53-202ENST00000359597 MS4A4AQ96JQ5 239 aa13.62□□□□□ -0.23
TP53-202ENST00000359597 TCEANC2Q96MN5 208 aa13.62□□□□□ -0.23
TP53-202ENST00000359597 LRRC2Q9BYS8 371 aa13.62□□□□□ -0.23
TP53-202ENST00000359597 EMILIN3Q9NT22 766 aa13.62□□□□□ -0.23
TP53-202ENST00000359597 PNMA3Q9UL41 463 aa13.62□□□□□ -0.23
TP53-202ENST00000359597 ISY1Q9ULR0 285 aaKnown RBP13.62□□□□□ -0.23
TP53-202ENST00000359597 AGTPBP1Q9UPW5 1226 aa13.62□□□□□ -0.23
TP53-202ENST00000359597 SLC45A1Q9Y2W3 748 aa13.62□□□□□ -0.23
TP53-202ENST00000359597 NDUFB10O96000 172 aa13.61□□□□□ -0.23
TP53-202ENST00000359597 ALDH1A1P00352 501 aa13.61□□□□□ -0.23
TP53-202ENST00000359597 VCAM1P19320 739 aa13.61□□□□□ -0.23
TP53-202ENST00000359597 KIF5BP33176 963 aa13.61□□□□□ -0.23
TP53-202ENST00000359597 HTRA3P83110 453 aa13.61□□□□□ -0.23
TP53-202ENST00000359597 KIF23Q02241 960 aaPredicted RBP13.61□□□□□ -0.23
TP53-202ENST00000359597 SLFN13Q68D06 897 aa13.61□□□□□ -0.23
TP53-202ENST00000359597 ANKRD23Q86SG2 305 aa13.61□□□□□ -0.23
TP53-202ENST00000359597 ZNF654Q8IZM8 581 aa13.61□□□□□ -0.23
TP53-202ENST00000359597 SPICE1Q8N0Z3 855 aa13.61□□□□□ -0.23
TP53-202ENST00000359597 CTCFLQ8NI51 663 aaPredicted RBP13.61□□□□□ -0.23
TP53-202ENST00000359597 BRF1Q92994 677 aa13.61□□□□□ -0.23
TP53-202ENST00000359597 AGXT2Q9BYV1 514 aa13.61□□□□□ -0.23
TP53-202ENST00000359597 TANGO6Q9C0B7 1094 aa13.61□□□□□ -0.23
TP53-202ENST00000359597 ALDH8A1Q9H2A2 487 aaPredicted RBP13.61□□□□□ -0.23
TP53-202ENST00000359597 USP17L15C9J2P7 530 aa13.6□□□□□ -0.23
TP53-202ENST00000359597 USP17L13C9JLJ4 530 aa13.6□□□□□ -0.23
TP53-202ENST00000359597 USP17L11C9JVI0 530 aa13.6□□□□□ -0.23
TP53-202ENST00000359597 USP17L18D6R9N7 530 aa13.6□□□□□ -0.23
TP53-202ENST00000359597 USP17L22D6RA61 530 aa13.6□□□□□ -0.23
TP53-202ENST00000359597 USP17L17D6RBQ6 530 aa13.6□□□□□ -0.23
TP53-202ENST00000359597 USP17L19D6RCP7 530 aa13.6□□□□□ -0.23
TP53-202ENST00000359597 USP17L20D6RJB6 530 aa13.6□□□□□ -0.23
TP53-202ENST00000359597 BMP3P12645 472 aa13.6□□□□□ -0.23
TP53-202ENST00000359597 IRX3P78415 501 aaPredicted RBP13.6□□□□□ -0.23
TP53-202ENST00000359597 USP17L24Q0WX57 530 aa13.6□□□□□ -0.23
TP53-202ENST00000359597 PPP2R5BQ15173 497 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms