RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 INTS4Q96HW7 963 aaKnown RBP14.39□□□□□ -0.11
NLRC3-202ENST00000359128 ZSCAN10Q96SZ4 725 aaPredicted RBP14.39□□□□□ -0.11
NLRC3-202ENST00000359128 TMEM2Q9UHN6 1383 aa14.38□□□□□ -0.11
NLRC3-202ENST00000359128 CRKLP46109 303 aaKnown RBP14.38□□□□□ -0.11
NLRC3-202ENST00000359128 USP14P54578 494 aa14.38□□□□□ -0.11
NLRC3-202ENST00000359128 SETDB1Q15047 1291 aa14.38□□□□□ -0.11
NLRC3-202ENST00000359128 DAAM2Q86T65 1068 aa14.38□□□□□ -0.11
NLRC3-202ENST00000359128 IGSF22Q8N9C0 903 aa14.38□□□□□ -0.11
NLRC3-202ENST00000359128 MLH3Q9UHC1 1453 aa14.38□□□□□ -0.11
NLRC3-202ENST00000359128 CLRN2A0PK11 232 aa14.38□□□□□ -0.11
NLRC3-202ENST00000359128 H0YCG3 227 aa14.38□□□□□ -0.11
NLRC3-202ENST00000359128 EIF4A1P60842 406 aaKnown RBP14.38□□□□□ -0.11
NLRC3-202ENST00000359128 ITKQ08881 620 aa14.38□□□□□ -0.11
NLRC3-202ENST00000359128 CALCOCO1Q9P1Z2 691 aa14.38□□□□□ -0.11
NLRC3-202ENST00000359128 MYO1AQ9UBC5 1043 aa14.38□□□□□ -0.11
NLRC3-202ENST00000359128 ATF5Q9Y2D1 282 aaPredicted RBP14.38□□□□□ -0.11
NLRC3-202ENST00000359128 USP26Q9BXU7 913 aa14.38□□□□□ -0.11
NLRC3-202ENST00000359128 HSPA1LP34931 641 aa14.38□□□□□ -0.11
NLRC3-202ENST00000359128 CHRNDQ07001 517 aa14.38□□□□□ -0.11
NLRC3-202ENST00000359128 SUGCTQ9HAC7 445 aa14.38□□□□□ -0.11
NLRC3-202ENST00000359128 ST7Q9NRC1 585 aa14.38□□□□□ -0.11
NLRC3-202ENST00000359128 NDUFB9Q9Y6M9 179 aa14.38□□□□□ -0.11
NLRC3-202ENST00000359128 RHOXF2BP0C7M4 288 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 TFDP1Q14186 410 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 SLC9C1Q4G0N8 1177 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 DALRD3Q5D0E6 543 aaKnown RBP14.37□□□□□ -0.11
NLRC3-202ENST00000359128 TRIM50Q86XT4 487 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 CCDC89Q8N998 374 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 RDH13Q8NBN7 331 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 RHOXF2Q9BQY4 288 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 CCDC94Q9BW85 323 aaPredicted RBP14.37□□□□□ -0.11
NLRC3-202ENST00000359128 VPS54Q9P1Q0 977 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 KCNJ14Q9UNX9 436 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 XDHP47989 1333 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 hCG_1642624A0A1W2PR95 340 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 K7ENM7 598 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 ACTN4O43707 911 aaKnown RBP14.37□□□□□ -0.11
NLRC3-202ENST00000359128 KRT26Q7Z3Y9 468 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 CCDC110Q8TBZ0 833 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 LOC102724428A0A0B4J2F2 783 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 CCDC160A6NGH7 325 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 SIK1P57059 783 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 LRMPQ12912 555 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 DMP1Q13316 513 aaPredicted RBP14.37□□□□□ -0.11
NLRC3-202ENST00000359128 PLCB4Q15147 1175 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 PRIMPOLQ96LW4 560 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 SAMD15Q9P1V8 674 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 PCDHB13Q9Y5F0 798 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 BCAMP50895 628 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 GPBP1Q86WP2 473 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 ZNF804BA4D1E1 1349 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 USP17L12C9JPN9 530 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 USP17L21D6R901 530 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 STAM2O75886 525 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 GNA14O95837 355 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 POLA2Q14181 598 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 ARHGAP44Q17R89 818 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 FYB2Q5VWT5 728 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 NELFBQ8WX92 580 aa14.37□□□□□ -0.11
NLRC3-202ENST00000359128 TLR3O15455 904 aaKnown RBP14.36□□□□□ -0.11
NLRC3-202ENST00000359128 SLC12A2P55011 1212 aa14.36□□□□□ -0.11
NLRC3-202ENST00000359128 KDRP35968 1356 aa14.36□□□□□ -0.11
NLRC3-202ENST00000359128 DYNC1I1O14576 645 aa14.36□□□□□ -0.11
NLRC3-202ENST00000359128 CIB2O75838 187 aa14.36□□□□□ -0.11
NLRC3-202ENST00000359128 CSPG5O95196 566 aa14.36□□□□□ -0.11
NLRC3-202ENST00000359128 CYP2J2P51589 502 aa14.36□□□□□ -0.11
NLRC3-202ENST00000359128 CCDC121Q6ZUS5 278 aa14.36□□□□□ -0.11
NLRC3-202ENST00000359128 APOL6Q9BWW8 343 aa14.36□□□□□ -0.11
NLRC3-202ENST00000359128 AKT3Q9Y243 479 aa14.36□□□□□ -0.11
NLRC3-202ENST00000359128 SNX14Q9Y5W7 946 aa14.36□□□□□ -0.11
NLRC3-202ENST00000359128 ZBTB7BO15156 539 aaPredicted RBP14.36□□□□□ -0.11
NLRC3-202ENST00000359128 IVLP07476 585 aa14.36□□□□□ -0.11
NLRC3-202ENST00000359128 CPLX4Q7Z7G2 160 aa14.36□□□□□ -0.11
NLRC3-202ENST00000359128 BEND3Q5T5X7 828 aa14.36□□□□□ -0.11
NLRC3-202ENST00000359128 PRDM10Q9NQV6 1147 aa14.36□□□□□ -0.11
NLRC3-202ENST00000359128 TMEM232C9JQI7 657 aa14.36□□□□□ -0.11
NLRC3-202ENST00000359128 SYCE1Q8N0S2 351 aa14.36□□□□□ -0.11
NLRC3-202ENST00000359128 ZNF277Q9NRM2 450 aaPredicted RBP14.36□□□□□ -0.11
NLRC3-202ENST00000359128 MAP3K15Q6ZN16 1313 aa14.35□□□□□ -0.11
NLRC3-202ENST00000359128 WDR17Q8IZU2 1322 aa14.35□□□□□ -0.11
NLRC3-202ENST00000359128 DSCC1Q9BVC3 393 aa14.35□□□□□ -0.11
NLRC3-202ENST00000359128 DDX25Q9UHL0 483 aaKnown RBP14.35□□□□□ -0.11
NLRC3-202ENST00000359128 THRAP3Q9Y2W1 955 aaKnown RBP14.35□□□□□ -0.11
NLRC3-202ENST00000359128 SERPINB2P05120 415 aa14.35□□□□□ -0.11
NLRC3-202ENST00000359128 MKRN3Q13064 507 aaKnown RBP14.35□□□□□ -0.11
NLRC3-202ENST00000359128 RNASE9P60153 205 aaKnown RBP14.35□□□□□ -0.11
NLRC3-202ENST00000359128 SLFN13Q68D06 897 aa14.35□□□□□ -0.11
NLRC3-202ENST00000359128 SCYL2Q6P3W7 929 aa14.35□□□□□ -0.11
NLRC3-202ENST00000359128 PLA2G4DQ86XP0 818 aa14.35□□□□□ -0.11
NLRC3-202ENST00000359128 IREB2P48200 963 aaKnown RBP14.35□□□□□ -0.11
NLRC3-202ENST00000359128 NOLC1Q14978 699 aaKnown RBP eCLIP14.35□□□□□ -0.11
NLRC3-202ENST00000359128 SFMBT2Q5VUG0 894 aa14.35□□□□□ -0.11
NLRC3-202ENST00000359128 TMC4Q7Z404 712 aa14.35□□□□□ -0.11
NLRC3-202ENST00000359128 SWAP70Q9UH65 585 aa14.35□□□□□ -0.11
NLRC3-202ENST00000359128 TCOF1Q13428 1488 aaKnown RBP14.35□□□□□ -0.11
NLRC3-202ENST00000359128 TYW5A2RUC4 315 aaKnown RBP14.35□□□□□ -0.11
NLRC3-202ENST00000359128 CCDC93Q567U6 631 aa14.35□□□□□ -0.11
NLRC3-202ENST00000359128 METTL23Q86XA0 190 aa14.35□□□□□ -0.11
NLRC3-202ENST00000359128 KIF9Q9HAQ2 790 aa14.35□□□□□ -0.11
NLRC3-202ENST00000359128 RRP9O43818 475 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms